RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 HBP1O60381 514 aa17.36■□□□□ 0.37
VPS26A-207ENST00000490696 NBNO60934 754 aa17.36■□□□□ 0.37
VPS26A-207ENST00000490696 CAND2O75155 1236 aa17.36■□□□□ 0.37
VPS26A-207ENST00000490696 CXCL10P02778 98 aa17.36■□□□□ 0.37
VPS26A-207ENST00000490696 JAK3P52333 1124 aa17.36■□□□□ 0.37
VPS26A-207ENST00000490696 IGBP1P78318 339 aa17.36■□□□□ 0.37
VPS26A-207ENST00000490696 MBTPS1Q14703 1052 aa17.36■□□□□ 0.37
VPS26A-207ENST00000490696 TAF2Q6P1X5 1199 aa17.36■□□□□ 0.37
VPS26A-207ENST00000490696 OTOP2Q7RTS6 562 aa17.36■□□□□ 0.37
VPS26A-207ENST00000490696 RPAINQ86UA6 219 aa17.36■□□□□ 0.37
VPS26A-207ENST00000490696 RDM1Q8NG50 284 aa17.36■□□□□ 0.37
VPS26A-207ENST00000490696 CXXC1Q9P0U4 656 aaPredicted RBP17.36■□□□□ 0.37
VPS26A-207ENST00000490696 VAV3Q9UKW4 847 aa17.36■□□□□ 0.37
VPS26A-207ENST00000490696 MYH9P35579 1960 aaKnown RBP17.35■□□□□ 0.37
VPS26A-207ENST00000490696 RSPH10B2B2RC85 870 aa17.35■□□□□ 0.37
VPS26A-207ENST00000490696 RSPH10BP0C881 870 aa17.35■□□□□ 0.37
VPS26A-207ENST00000490696 PPP2R5CQ13362 524 aa17.35■□□□□ 0.37
VPS26A-207ENST00000490696 TRAPPC12Q8WVT3 735 aa17.35■□□□□ 0.37
VPS26A-207ENST00000490696 ZBTB10Q96DT7 871 aa17.35■□□□□ 0.37
VPS26A-207ENST00000490696 WDR81Q562E7 1941 aa17.35■□□□□ 0.37
VPS26A-207ENST00000490696 ZBTB42B2RXF5 422 aa17.34■□□□□ 0.37
VPS26A-207ENST00000490696 KIF28PB7ZC32 967 aa17.34■□□□□ 0.37
VPS26A-207ENST00000490696 ZNF862O60290 1169 aa17.34■□□□□ 0.37
VPS26A-207ENST00000490696 GJB2P29033 226 aa17.34■□□□□ 0.37
VPS26A-207ENST00000490696 SMAD3P84022 425 aaKnown RBP17.34■□□□□ 0.37
VPS26A-207ENST00000490696 CUL4AQ13619 759 aa17.34■□□□□ 0.37
VPS26A-207ENST00000490696 UGCGQ16739 394 aa17.34■□□□□ 0.37
VPS26A-207ENST00000490696 FAM26DQ5JW98 314 aa17.34■□□□□ 0.37
VPS26A-207ENST00000490696 GPR153Q6NV75 609 aa17.34■□□□□ 0.37
VPS26A-207ENST00000490696 MIER3Q7Z3K6 550 aa17.34■□□□□ 0.37
VPS26A-207ENST00000490696 BBXQ8WY36 941 aaPredicted RBP17.34■□□□□ 0.37
VPS26A-207ENST00000490696 MTIF3Q9H2K0 278 aaKnown RBP17.34■□□□□ 0.37
VPS26A-207ENST00000490696 KIF3AQ9Y496 699 aa17.34■□□□□ 0.37
VPS26A-207ENST00000490696 PCDHA2Q9Y5H9 948 aa17.34■□□□□ 0.37
VPS26A-207ENST00000490696 COL1A2P08123 1366 aa17.33■□□□□ 0.36
VPS26A-207ENST00000490696 RBAK-RBAKDNI3L0D1 243 aa17.33■□□□□ 0.36
VPS26A-207ENST00000490696 EML1O00423 815 aa17.33■□□□□ 0.36
VPS26A-207ENST00000490696 CTSHP09668 335 aa17.33■□□□□ 0.36
VPS26A-207ENST00000490696 U2AF2P26368 475 aaKnown RBP eCLIP17.33■□□□□ 0.36
VPS26A-207ENST00000490696 ZNF484Q5JVG2 852 aa17.33■□□□□ 0.36
VPS26A-207ENST00000490696 FAM109BQ6ICB4 259 aaPredicted RBP17.33■□□□□ 0.36
VPS26A-207ENST00000490696 MTHFD1LQ6UB35 978 aa17.33■□□□□ 0.36
VPS26A-207ENST00000490696 NOSTRINQ8IVI9 506 aa17.33■□□□□ 0.36
VPS26A-207ENST00000490696 CKAP2LQ8IYA6 745 aa17.33■□□□□ 0.36
VPS26A-207ENST00000490696 DNAJB3Q8WWF6 145 aa17.33■□□□□ 0.36
VPS26A-207ENST00000490696 FTOQ9C0B1 505 aaKnown RBP eCLIP17.33■□□□□ 0.36
VPS26A-207ENST00000490696 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.33■□□□□ 0.36
VPS26A-207ENST00000490696 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.32■□□□□ 0.36
VPS26A-207ENST00000490696 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.32■□□□□ 0.36
VPS26A-207ENST00000490696 NEMFO60524 1076 aa17.32■□□□□ 0.36
VPS26A-207ENST00000490696 CHRNA1P02708 482 aa17.32■□□□□ 0.36
VPS26A-207ENST00000490696 OATP04181 439 aa17.32■□□□□ 0.36
VPS26A-207ENST00000490696 ACTN1P12814 892 aa17.32■□□□□ 0.36
VPS26A-207ENST00000490696 PRKCEQ02156 737 aa17.32■□□□□ 0.36
VPS26A-207ENST00000490696 SPIRE1Q08AE8 756 aa17.32■□□□□ 0.36
VPS26A-207ENST00000490696 TCTN1Q2MV58 587 aa17.32■□□□□ 0.36
VPS26A-207ENST00000490696 SLFN12Q8IYM2 578 aa17.32■□□□□ 0.36
VPS26A-207ENST00000490696 FAM167AQ96KS9 214 aa17.32■□□□□ 0.36
VPS26A-207ENST00000490696 MTMR9Q96QG7 549 aa17.32■□□□□ 0.36
VPS26A-207ENST00000490696 OSBPL7Q9BZF2 842 aa17.32■□□□□ 0.36
VPS26A-207ENST00000490696 SMC3Q9UQE7 1217 aa17.32■□□□□ 0.36
VPS26A-207ENST00000490696 SMIM35A0A1B0GVV1 85 aa17.31■□□□□ 0.36
VPS26A-207ENST00000490696 MARCH6O60337 910 aa17.31■□□□□ 0.36
VPS26A-207ENST00000490696 STBD1O95210 358 aa17.31■□□□□ 0.36
VPS26A-207ENST00000490696 BAG4O95429 457 aaKnown RBP17.31■□□□□ 0.36
VPS26A-207ENST00000490696 C22orf31O95567 290 aa17.31■□□□□ 0.36
VPS26A-207ENST00000490696 RPLP2P05387 115 aaKnown RBP17.31■□□□□ 0.36
VPS26A-207ENST00000490696 ATP2B1P20020 1258 aa17.31■□□□□ 0.36
VPS26A-207ENST00000490696 KLRC1P26715 233 aa17.31■□□□□ 0.36
VPS26A-207ENST00000490696 MGAT3Q09327 533 aa17.31■□□□□ 0.36
VPS26A-207ENST00000490696 GNL2Q13823 731 aaKnown RBP17.31■□□□□ 0.36
VPS26A-207ENST00000490696 CALCRLQ16602 461 aa17.31■□□□□ 0.36
VPS26A-207ENST00000490696 CNKSR3Q6P9H4 555 aa17.31■□□□□ 0.36
VPS26A-207ENST00000490696 TRMT1LQ7Z2T5 733 aaKnown RBP17.31■□□□□ 0.36
VPS26A-207ENST00000490696 RSPH3Q86UC2 560 aa17.31■□□□□ 0.36
VPS26A-207ENST00000490696 FAM49AQ9H0Q0 323 aaPredicted RBP17.31■□□□□ 0.36
VPS26A-207ENST00000490696 TMEM60Q9H2L4 133 aa17.31■□□□□ 0.36
VPS26A-207ENST00000490696 ZBBXA8MT70 800 aa17.3■□□□□ 0.36
VPS26A-207ENST00000490696 GRXCR1A8MXD5 290 aa17.3■□□□□ 0.36
VPS26A-207ENST00000490696 BAIAP3O94812 1187 aa17.3■□□□□ 0.36
VPS26A-207ENST00000490696 MCM7P33993 719 aa17.3■□□□□ 0.36
VPS26A-207ENST00000490696 TRAPPC10P48553 1259 aa17.3■□□□□ 0.36
VPS26A-207ENST00000490696 PLEKHG4Q58EX7 1191 aa17.3■□□□□ 0.36
VPS26A-207ENST00000490696 BANK1Q8NDB2 785 aa17.3■□□□□ 0.36
VPS26A-207ENST00000490696 NRBP2Q9NSY0 501 aa17.3■□□□□ 0.36
VPS26A-207ENST00000490696 CEP131Q9UPN4 1083 aa17.3■□□□□ 0.36
VPS26A-207ENST00000490696 SLC4A7Q9Y6M7 1214 aa17.3■□□□□ 0.36
VPS26A-207ENST00000490696 PSMC5P62195 406 aa17.29■□□□□ 0.36
VPS26A-207ENST00000490696 MRPS6P82932 125 aaKnown RBP17.29■□□□□ 0.36
VPS26A-207ENST00000490696 ORC2Q13416 577 aaPredicted RBP17.29■□□□□ 0.36
VPS26A-207ENST00000490696 EPHA7Q15375 998 aa17.29■□□□□ 0.36
VPS26A-207ENST00000490696 TARBP2Q15633 366 aaKnown RBP17.29■□□□□ 0.36
VPS26A-207ENST00000490696 ZNF174Q15697 407 aa17.29■□□□□ 0.36
VPS26A-207ENST00000490696 TTC38Q5R3I4 469 aa17.29■□□□□ 0.36
VPS26A-207ENST00000490696 KIAA0319LQ8IZA0 1049 aa17.29■□□□□ 0.36
VPS26A-207ENST00000490696 DBF4BQ8NFT6 615 aa17.29■□□□□ 0.36
VPS26A-207ENST00000490696 NIFKQ9BYG3 293 aaKnown RBP17.29■□□□□ 0.36
VPS26A-207ENST00000490696 PCDHA12Q9UN75 941 aa17.29■□□□□ 0.36
VPS26A-207ENST00000490696 CDY2AQ9Y6F7 541 aa17.29■□□□□ 0.36
VPS26A-207ENST00000490696 ABHD14A-ACY1A0A1B0GW23 586 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms