RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 ABCC10Q5T3U5 1492 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.84□□□□□ -1.79
CALD1-221ENST00000489019 CCDC66A2RUB6 948 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 FAM90A27PA6NNH2 459 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 ZNF561-AS1K7EIQ3 104 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 MAN2B1O00754 1011 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 KCNK3O14649 394 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 COL6A1P12109 1028 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 IL13P35225 146 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 JAM2P57087 298 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 GJA9P57773 515 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 SQSTM1Q13501 440 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 GPR19Q15760 415 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 FAM26FQ5R3K3 315 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 ZFYVE27Q5T4F4 411 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 PRAMEF18Q5VWM3 479 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 C16orf59Q7L2K0 433 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 FGD2Q7Z6J4 655 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 PTRH1Q86Y79 214 aaKnown RBP3.84□□□□□ -1.79
CALD1-221ENST00000489019 ZC3H7AQ8IWR0 971 aaKnown RBP3.84□□□□□ -1.79
CALD1-221ENST00000489019 FAM177A1Q8N128 213 aaPredicted RBP3.84□□□□□ -1.79
CALD1-221ENST00000489019 DTX3Q8N9I9 347 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 ZSWIM2Q8NEG5 633 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 CXorf38Q8TB03 319 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 DDX1Q92499 740 aaKnown RBP3.84□□□□□ -1.79
CALD1-221ENST00000489019 FBXW5Q969U6 566 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 DRC1Q96MC2 740 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 CLIC6Q96NY7 704 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 PUS7Q96PZ0 661 aaKnown RBP3.84□□□□□ -1.79
CALD1-221ENST00000489019 TMEM209Q96SK2 561 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 POLR3GLQ9BT43 218 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 NCOA5Q9HCD5 579 aaKnown RBP3.84□□□□□ -1.79
CALD1-221ENST00000489019 SMURF1Q9HCE7 757 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 CATSPERZQ9NTU4 200 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 CROTQ9UKG9 612 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 SRPK3Q9UPE1 567 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 COQ6Q9Y2Z9 468 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 NUP155O75694 1391 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 ANKRD30BQ9BXX2 1392 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 KIAA1107Q9UPP5 1409 aa3.84□□□□□ -1.79
CALD1-221ENST00000489019 CCDC141Q6ZP82 1450 aa3.84□□□□□ -1.8
CALD1-221ENST00000489019 SHANK2Q9UPX8 1470 aa3.84□□□□□ -1.8
CALD1-221ENST00000489019 ABCC2Q92887 1545 aa3.84□□□□□ -1.8
CALD1-221ENST00000489019 SHROOM2Q13796 1616 aa3.84□□□□□ -1.8
CALD1-221ENST00000489019 B8ZZF3 427 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 CCER2I3L3R5 266 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 PRRG2O14669 202 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 KCNQ2O43526 872 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 EFCAB14O75071 495 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 IL18BPO95998 194 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 KCNA6P17658 529 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 PTPN1P18031 435 aaKnown RBP3.83□□□□□ -1.8
CALD1-221ENST00000489019 KRT15P19012 456 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 CNR2P34972 360 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 BUD31P41223 144 aaPredicted RBP3.83□□□□□ -1.8
CALD1-221ENST00000489019 DNM2P50570 870 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 ST5P78524 1137 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 PFKPQ01813 784 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 NFE2L2Q16236 605 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 SKOR2Q2VWA4 1001 aaPredicted RBP3.83□□□□□ -1.8
CALD1-221ENST00000489019 CCDC144BQ3MJ40 725 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 TM4SF20Q53R12 229 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 VASNQ6EMK4 673 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 FSTL4Q6MZW2 842 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 ABHD17CQ6PCB6 329 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 BRAPQ7Z569 592 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 UBXN4Q92575 508 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 CLUHP3Q96NS8 147 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 PIF1Q9H611 641 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 ZSWIM4Q9H7M6 989 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 TRIM39Q9HCM9 518 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 DLL4Q9NR61 685 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 SFMBT1Q9UHJ3 866 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 NCANO14594 1321 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 KIF15Q9NS87 1388 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 DENND4BO75064 1496 aaPredicted RBP3.83□□□□□ -1.8
CALD1-221ENST00000489019 RPRD2Q5VT52 1461 aaKnown RBP3.83□□□□□ -1.8
CALD1-221ENST00000489019 ERCC6L2Q5T890 1561 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 SAMD9LQ8IVG5 1584 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 PREX2Q70Z35 1606 aa3.83□□□□□ -1.8
CALD1-221ENST00000489019 MYO5CQ9NQX4 1742 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 CDC42BPBQ9Y5S2 1711 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 ZCCHC11Q5TAX3 1644 aaKnown RBP3.82□□□□□ -1.8
CALD1-221ENST00000489019 ARHGEF5Q12774 1597 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 CLASP1Q7Z460 1538 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.82□□□□□ -1.8
CALD1-221ENST00000489019 SYCP2Q9BX26 1530 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 PZPP20742 1482 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 PLEKHH2Q8IVE3 1493 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 CCDC163A0A0D9SF12 145 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 TCRBV16S1A1N1A0A5B0 115 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 MROH6A6NGR9 719 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 ZNF839A8K0R7 811 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 RAPGEF3O95398 923 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 SYN1P17600 705 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 NAT1P18440 290 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 GLRBP48167 497 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 LACTBP83111 547 aaPredicted RBP3.82□□□□□ -1.8
CALD1-221ENST00000489019 SEC23AQ15436 765 aa3.82□□□□□ -1.8
CALD1-221ENST00000489019 CRY1Q16526 586 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms