RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 SCLYQ96I15 445 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 SENP7Q9BQF6 1050 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 C22orf23Q9BZE7 217 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 SLC6A16Q9GZN6 736 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 GLT8D2Q9H1C3 349 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 AGO4Q9HCK5 861 aaKnown RBP8.16□□□□□ -1.1
UBE4B-209ENST00000487244 SH3GLB2Q9NR46 395 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 GTF2IRD1Q9UHL9 959 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 CHD7Q9P2D1 2997 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 STK36Q9NRP7 1315 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 H3BRB1 525 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 DDX39AO00148 427 aaKnown RBP8.15□□□□□ -1.1
UBE4B-209ENST00000487244 MEIS1O00470 390 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 CDKL5O76039 1030 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 CCNE2O96020 404 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 CYP3A4P08684 503 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 SMIM10L2AP0DMW4 78 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 SMIM10L2BP0DMW5 78 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 GNA11P29992 359 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 TCF7P36402 384 aaPredicted RBP8.15□□□□□ -1.1
UBE4B-209ENST00000487244 RBM25P49756 843 aaKnown RBP8.15□□□□□ -1.1
UBE4B-209ENST00000487244 FAM109BQ6ICB4 259 aaPredicted RBP8.15□□□□□ -1.1
UBE4B-209ENST00000487244 CPLX2Q6PUV4 134 aaKnown RBP8.15□□□□□ -1.1
UBE4B-209ENST00000487244 SESTD1Q86VW0 696 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 TEX2Q8IWB9 1127 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 BLIDQ8IZY5 108 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 C7orf31Q8N865 590 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 NSUN7Q8NE18 718 aaKnown RBP8.15□□□□□ -1.1
UBE4B-209ENST00000487244 GJA10Q969M2 543 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 LENG9Q96B70 501 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 CDHR1Q96JP9 859 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 PCYT2Q99447 389 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.15□□□□□ -1.1
UBE4B-209ENST00000487244 PHF20Q9BVI0 1012 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 SEZ6LQ9BYH1 1024 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 TUT1Q9H6E5 874 aaKnown RBP8.15□□□□□ -1.1
UBE4B-209ENST00000487244 JPH1Q9HDC5 661 aaPredicted RBP8.15□□□□□ -1.1
UBE4B-209ENST00000487244 ORC3Q9UBD5 711 aaPredicted RBP8.15□□□□□ -1.1
UBE4B-209ENST00000487244 PCDHA4Q9UN74 947 aa8.15□□□□□ -1.1
UBE4B-209ENST00000487244 MYO9BQ13459 2157 aa8.15□□□□□ -1.11
UBE4B-209ENST00000487244 EVPLQ92817 2033 aa8.15□□□□□ -1.11
UBE4B-209ENST00000487244 DHX15O43143 795 aaKnown RBP8.14□□□□□ -1.11
UBE4B-209ENST00000487244 HOXA2O43364 376 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 EIF5BO60841 1220 aaKnown RBP8.14□□□□□ -1.11
UBE4B-209ENST00000487244 CD2BP2O95400 341 aaKnown RBP8.14□□□□□ -1.11
UBE4B-209ENST00000487244 TDP2O95551 362 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 S1PR4O95977 384 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 SUPT20HL2P0C7V6 817 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 MARK3P27448 753 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 HOXC8P31273 242 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 ZNF76P36508 570 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 ACTR2P61160 394 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 PTPN11Q06124 597 aaPredicted RBP8.14□□□□□ -1.11
UBE4B-209ENST00000487244 TRIM71Q2Q1W2 868 aaKnown RBP8.14□□□□□ -1.11
UBE4B-209ENST00000487244 LRIT3Q3SXY7 679 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 PRR16Q569H4 304 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 EARS2Q5JPH6 523 aaKnown RBP8.14□□□□□ -1.11
UBE4B-209ENST00000487244 TMEM240Q5SV17 173 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 ZNF365Q70YC5 407 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 NIPA1Q7RTP0 329 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 PLA2G4DQ86XP0 818 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 CCDC83Q8IWF9 413 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 TMEM199Q8N511 208 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 DAGLBQ8NCG7 672 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 GIMAP8Q8ND71 665 aaPredicted RBP8.14□□□□□ -1.11
UBE4B-209ENST00000487244 BICD2Q8TD16 824 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 TBCKQ8TEA7 893 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 ZBTB10Q96DT7 871 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 RNPC3Q96LT9 517 aaKnown RBP8.14□□□□□ -1.11
UBE4B-209ENST00000487244 KATNAL1Q9BW62 490 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 RNPEPQ9H4A4 650 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 SLC9A2Q9UBY0 812 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 LIMCH1Q9UPQ0 1083 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 NOD1Q9Y239 953 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 GTF3C3Q9Y5Q9 886 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 COL6A3P12111 3177 aa8.14□□□□□ -1.11
UBE4B-209ENST00000487244 MICAL3Q7RTP6 2002 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 NFASCO94856 1347 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 RNF223E7ERA6 249 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 IPO5O00410 1097 aaKnown RBP8.13□□□□□ -1.11
UBE4B-209ENST00000487244 TREHO43280 583 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 IQCF3P0C7M6 154 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 CIITAP33076 1130 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 NR5A1Q13285 461 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 PPIGQ13427 754 aaKnown RBP eCLIP8.13□□□□□ -1.11
UBE4B-209ENST00000487244 MBTPS1Q14703 1052 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 GPNMBQ14956 572 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 INF2Q27J81 1249 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 TCTN1Q2MV58 587 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 BRICD5Q6PL45 260 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 TRAF7Q6Q0C0 670 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 Q7L0L9 218 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 DEFB128Q7Z7B8 93 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 SERINC5Q86VE9 423 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 LMBR1Q8WVP7 490 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 SPIRE2Q8WWL2 714 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 SEPT1Q8WYJ6 367 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 THAP11Q96EK4 314 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 TBC1D32Q96NH3 1257 aa8.13□□□□□ -1.11
UBE4B-209ENST00000487244 SDF4Q9BRK5 362 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms