RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 KAT6AQ92794 2004 aa20.51■□□□□ 0.87
COL1A1-207ENST00000486572 RSPH10B2B2RC85 870 aa20.51■□□□□ 0.87
COL1A1-207ENST00000486572 NEMFO60524 1076 aa20.51■□□□□ 0.87
COL1A1-207ENST00000486572 BAG4O95429 457 aaKnown RBP20.51■□□□□ 0.87
COL1A1-207ENST00000486572 RSPH10BP0C881 870 aa20.51■□□□□ 0.87
COL1A1-207ENST00000486572 PPP2R5CQ13362 524 aa20.51■□□□□ 0.87
COL1A1-207ENST00000486572 OTOP2Q7RTS6 562 aa20.51■□□□□ 0.87
COL1A1-207ENST00000486572 TRAPPC12Q8WVT3 735 aa20.51■□□□□ 0.87
COL1A1-207ENST00000486572 LRCH3Q96II8 777 aa20.51■□□□□ 0.87
COL1A1-207ENST00000486572 FAM167AQ96KS9 214 aa20.51■□□□□ 0.87
COL1A1-207ENST00000486572 FTOQ9C0B1 505 aaKnown RBP eCLIP20.51■□□□□ 0.87
COL1A1-207ENST00000486572 KIF28PB7ZC32 967 aa20.5■□□□□ 0.87
COL1A1-207ENST00000486572 WNT7AO00755 349 aa20.5■□□□□ 0.87
COL1A1-207ENST00000486572 NBNO60934 754 aa20.5■□□□□ 0.87
COL1A1-207ENST00000486572 CTSHP09668 335 aa20.5■□□□□ 0.87
COL1A1-207ENST00000486572 ACTN1P12814 892 aa20.5■□□□□ 0.87
COL1A1-207ENST00000486572 CUL4AQ13619 759 aa20.5■□□□□ 0.87
COL1A1-207ENST00000486572 MBTPS1Q14703 1052 aa20.5■□□□□ 0.87
COL1A1-207ENST00000486572 GPNMBQ14956 572 aa20.5■□□□□ 0.87
COL1A1-207ENST00000486572 CALCRLQ16602 461 aa20.5■□□□□ 0.87
COL1A1-207ENST00000486572 UGCGQ16739 394 aa20.5■□□□□ 0.87
COL1A1-207ENST00000486572 ZNF484Q5JVG2 852 aa20.5■□□□□ 0.87
COL1A1-207ENST00000486572 RPAINQ86UA6 219 aa20.5■□□□□ 0.87
COL1A1-207ENST00000486572 RSPH3Q86UC2 560 aa20.5■□□□□ 0.87
COL1A1-207ENST00000486572 MYH9P35579 1960 aaKnown RBP20.49■□□□□ 0.87
COL1A1-207ENST00000486572 ZNF862O60290 1169 aa20.49■□□□□ 0.87
COL1A1-207ENST00000486572 CXCL10P02778 98 aa20.49■□□□□ 0.87
COL1A1-207ENST00000486572 OATP04181 439 aa20.49■□□□□ 0.87
COL1A1-207ENST00000486572 RPLP2P05387 115 aaKnown RBP20.49■□□□□ 0.87
COL1A1-207ENST00000486572 ATP2B1P20020 1258 aa20.49■□□□□ 0.87
COL1A1-207ENST00000486572 U2AF2P26368 475 aaKnown RBP eCLIP20.49■□□□□ 0.87
COL1A1-207ENST00000486572 PRKCEQ02156 737 aa20.49■□□□□ 0.87
COL1A1-207ENST00000486572 ZBTB10Q96DT7 871 aa20.49■□□□□ 0.87
COL1A1-207ENST00000486572 CXXC1Q9P0U4 656 aaPredicted RBP20.49■□□□□ 0.87
COL1A1-207ENST00000486572 PCDHA2Q9Y5H9 948 aa20.49■□□□□ 0.87
COL1A1-207ENST00000486572 ZBTB42B2RXF5 422 aa20.48■□□□□ 0.87
COL1A1-207ENST00000486572 SMAD3P84022 425 aaKnown RBP20.48■□□□□ 0.87
COL1A1-207ENST00000486572 ORC2Q13416 577 aaPredicted RBP20.48■□□□□ 0.87
COL1A1-207ENST00000486572 MTHFD1LQ6UB35 978 aa20.48■□□□□ 0.87
COL1A1-207ENST00000486572 TRMT1LQ7Z2T5 733 aaKnown RBP20.48■□□□□ 0.87
COL1A1-207ENST00000486572 DNAJB3Q8WWF6 145 aa20.48■□□□□ 0.87
COL1A1-207ENST00000486572 NOL7Q9UMY1 257 aaKnown RBP20.48■□□□□ 0.87
COL1A1-207ENST00000486572 CEP131Q9UPN4 1083 aa20.48■□□□□ 0.87
COL1A1-207ENST00000486572 WDR81Q562E7 1941 aa20.47■□□□□ 0.87
COL1A1-207ENST00000486572 SMIM35A0A1B0GVV1 85 aa20.47■□□□□ 0.87
COL1A1-207ENST00000486572 ZBBXA8MT70 800 aa20.47■□□□□ 0.87
COL1A1-207ENST00000486572 H3BQV1 296 aa20.47■□□□□ 0.87
COL1A1-207ENST00000486572 EML1O00423 815 aa20.47■□□□□ 0.87
COL1A1-207ENST00000486572 BAIAP3O94812 1187 aa20.47■□□□□ 0.87
COL1A1-207ENST00000486572 KLRC1P26715 233 aa20.47■□□□□ 0.87
COL1A1-207ENST00000486572 MCM7P33993 719 aa20.47■□□□□ 0.87
COL1A1-207ENST00000486572 TRAPPC10P48553 1259 aa20.47■□□□□ 0.87
COL1A1-207ENST00000486572 SPIRE1Q08AE8 756 aa20.47■□□□□ 0.87
COL1A1-207ENST00000486572 FAM26DQ5JW98 314 aa20.47■□□□□ 0.87
COL1A1-207ENST00000486572 GPR153Q6NV75 609 aa20.47■□□□□ 0.87
COL1A1-207ENST00000486572 CNKSR3Q6P9H4 555 aa20.47■□□□□ 0.87
COL1A1-207ENST00000486572 FAM49AQ9H0Q0 323 aaPredicted RBP20.47■□□□□ 0.87
COL1A1-207ENST00000486572 NRBP2Q9NSY0 501 aa20.47■□□□□ 0.87
COL1A1-207ENST00000486572 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.46■□□□□ 0.87
COL1A1-207ENST00000486572 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.46■□□□□ 0.87
COL1A1-207ENST00000486572 K7ELQ4 463 aaPredicted RBP20.46■□□□□ 0.87
COL1A1-207ENST00000486572 PSMC5P62195 406 aa20.46■□□□□ 0.87
COL1A1-207ENST00000486572 TTC38Q5R3I4 469 aa20.46■□□□□ 0.87
COL1A1-207ENST00000486572 MCTP1Q6DN14 999 aa20.46■□□□□ 0.87
COL1A1-207ENST00000486572 NCAPH2Q6IBW4 605 aa20.46■□□□□ 0.87
COL1A1-207ENST00000486572 BANK1Q8NDB2 785 aa20.46■□□□□ 0.87
COL1A1-207ENST00000486572 MTMR9Q96QG7 549 aa20.46■□□□□ 0.87
COL1A1-207ENST00000486572 PCDHA12Q9UN75 941 aa20.46■□□□□ 0.87
COL1A1-207ENST00000486572 SLC4A7Q9Y6M7 1214 aa20.46■□□□□ 0.87
COL1A1-207ENST00000486572 C22orf31O95567 290 aa20.45■□□□□ 0.86
COL1A1-207ENST00000486572 CHRNA1P02708 482 aa20.45■□□□□ 0.86
COL1A1-207ENST00000486572 MRPS6P82932 125 aaKnown RBP20.45■□□□□ 0.86
COL1A1-207ENST00000486572 MGAT3Q09327 533 aa20.45■□□□□ 0.86
COL1A1-207ENST00000486572 XKR3Q5GH77 459 aa20.45■□□□□ 0.86
COL1A1-207ENST00000486572 FAM109BQ6ICB4 259 aaPredicted RBP20.45■□□□□ 0.86
COL1A1-207ENST00000486572 TMEM60Q9H2L4 133 aa20.45■□□□□ 0.86
COL1A1-207ENST00000486572 TTC12Q9H892 705 aaPredicted RBP20.45■□□□□ 0.86
COL1A1-207ENST00000486572 TET1Q8NFU7 2136 aa20.45■□□□□ 0.86
COL1A1-207ENST00000486572 M0QZ92 97 aa20.44■□□□□ 0.86
COL1A1-207ENST00000486572 DKC1O60832 514 aaKnown RBP eCLIP20.44■□□□□ 0.86
COL1A1-207ENST00000486572 P4HBP07237 508 aaKnown RBP20.44■□□□□ 0.86
COL1A1-207ENST00000486572 TXKP42681 527 aa20.44■□□□□ 0.86
COL1A1-207ENST00000486572 QARSP47897 775 aaKnown RBP20.44■□□□□ 0.86
COL1A1-207ENST00000486572 EPHA7Q15375 998 aa20.44■□□□□ 0.86
COL1A1-207ENST00000486572 ZNF174Q15697 407 aa20.44■□□□□ 0.86
COL1A1-207ENST00000486572 IER5Q5VY09 327 aa20.44■□□□□ 0.86
COL1A1-207ENST00000486572 LARP1BQ659C4 914 aaKnown RBP20.44■□□□□ 0.86
COL1A1-207ENST00000486572 NME8Q8N427 588 aa20.44■□□□□ 0.86
COL1A1-207ENST00000486572 SEPT9Q9UHD8 586 aaPredicted RBP20.44■□□□□ 0.86
COL1A1-207ENST00000486572 CDY2AQ9Y6F7 541 aa20.44■□□□□ 0.86
COL1A1-207ENST00000486572 SIP14410 1827 aa20.43■□□□□ 0.86
COL1A1-207ENST00000486572 MAGEB2O15479 319 aa20.43■□□□□ 0.86
COL1A1-207ENST00000486572 OR52Z1P0C646 297 aa20.43■□□□□ 0.86
COL1A1-207ENST00000486572 PLEKHG4Q58EX7 1191 aa20.43■□□□□ 0.86
COL1A1-207ENST00000486572 SNX21Q969T3 373 aa20.43■□□□□ 0.86
COL1A1-207ENST00000486572 INTS4Q96HW7 963 aaKnown RBP20.43■□□□□ 0.86
COL1A1-207ENST00000486572 SLC9A7Q96T83 725 aa20.43■□□□□ 0.86
COL1A1-207ENST00000486572 NIFKQ9BYG3 293 aaKnown RBP20.43■□□□□ 0.86
COL1A1-207ENST00000486572 ABHD14A-ACY1A0A1B0GW23 586 aa20.42■□□□□ 0.86
COL1A1-207ENST00000486572 GRXCR1A8MXD5 290 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms