RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 CDH24Q86UP0 819 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 PPM1KQ8N3J5 372 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 CRACR2BQ8N4Y2 399 aaPredicted RBP7.13□□□□□ -1.27
USP41-204ENST00000486536 RIN3Q8TB24 985 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 GRAPLQ8TC17 118 aaPredicted RBP7.13□□□□□ -1.27
USP41-204ENST00000486536 BTN2A2Q8WVV5 523 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 BRF1Q92994 677 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 RBM17Q96I25 401 aaKnown RBP7.13□□□□□ -1.27
USP41-204ENST00000486536 NEUROD6Q96NK8 337 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 DBNDD2Q9BQY9 259 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 ANKRD2Q9GZV1 360 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 DIS3Q9Y2L1 958 aaKnown RBP7.13□□□□□ -1.27
USP41-204ENST00000486536 TNPO3Q9Y5L0 923 aaKnown RBP7.13□□□□□ -1.27
USP41-204ENST00000486536 UTRNP46939 3433 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 NUP98P52948 1817 aa7.13□□□□□ -1.27
USP41-204ENST00000486536 RFX7Q2KHR2 1363 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.12□□□□□ -1.27
USP41-204ENST00000486536 BLACEA4D250 179 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 KRBA1A5PL33 1030 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 EFCAB14O75071 495 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 BBOX1O75936 387 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 KCNH1O95259 989 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 MMP10P09238 476 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 IFIT1P09914 478 aaKnown RBP7.12□□□□□ -1.27
USP41-204ENST00000486536 UQCRFS1P1P0C7P4 283 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 SLC5A1P13866 664 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 HOXB4P17483 251 aaPredicted RBP7.12□□□□□ -1.27
USP41-204ENST00000486536 PDE6BP35913 854 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 NEK4P51957 841 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 ZNF445P59923 1031 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 CHRNDQ07001 517 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 UBE4AQ14139 1066 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 PCBP1Q15365 356 aaKnown RBP eCLIP7.12□□□□□ -1.27
USP41-204ENST00000486536 SF1Q15637 639 aaKnown RBP7.12□□□□□ -1.27
USP41-204ENST00000486536 GPR162Q16538 588 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 GORABQ5T7V8 394 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 GTF2IRD2BQ6EKJ0 949 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 LETMD1Q6P1Q0 360 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 GTF2IRD2Q86UP8 949 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 RAVER1Q8IY67 606 aaKnown RBP7.12□□□□□ -1.27
USP41-204ENST00000486536 GSTCDQ8NEC7 633 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 RPGRQ92834 1020 aaKnown RBP7.12□□□□□ -1.27
USP41-204ENST00000486536 IRF7Q92985 503 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 RILPL2Q969X0 211 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 FBXL18Q96ME1 805 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 CCDC140Q96MF4 163 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 CRAMP1Q96RY5 1269 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 MRPL18Q9H0U6 180 aaKnown RBP7.12□□□□□ -1.27
USP41-204ENST00000486536 RRAGCQ9HB90 399 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 CGGBP1Q9UFW8 167 aaPredicted RBP7.12□□□□□ -1.27
USP41-204ENST00000486536 UBR3Q6ZT12 1888 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 C4AP0C0L4 1744 aa7.12□□□□□ -1.27
USP41-204ENST00000486536 REC8O95072 547 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 ASLP04424 464 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 POU3F2P20265 443 aaPredicted RBP7.11□□□□□ -1.27
USP41-204ENST00000486536 CHMLP26374 656 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 HOXC12P31275 282 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 STRN3Q13033 797 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 PPP2R5DQ14738 602 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 NBPF9Q3BBW0 867 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 TTC39AQ5SRH9 613 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 ANKRD34AQ69YU3 496 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.11□□□□□ -1.27
USP41-204ENST00000486536 BRAPQ7Z569 592 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 FGD2Q7Z6J4 655 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 RUFY2Q8WXA3 655 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 KCTD13Q8WZ19 329 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 CELF1Q92879 486 aaKnown RBP7.11□□□□□ -1.27
USP41-204ENST00000486536 PTPRN2Q92932 1015 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 MIPEPQ99797 713 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 BOLA2Q9H3K6 86 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 MINPP1Q9UNW1 487 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 PCDHB12Q9Y5F1 795 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 KAT6BQ8WYB5 2073 aa7.11□□□□□ -1.27
USP41-204ENST00000486536 LAMB2P55268 1798 aa7.1□□□□□ -1.27
USP41-204ENST00000486536 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.1□□□□□ -1.27
USP41-204ENST00000486536 OPA1O60313 960 aa7.1□□□□□ -1.27
USP41-204ENST00000486536 NPTXRO95502 500 aa7.1□□□□□ -1.27
USP41-204ENST00000486536 MAP4K4O95819 1239 aaPredicted RBP7.1□□□□□ -1.27
USP41-204ENST00000486536 NPR1P16066 1061 aa7.1□□□□□ -1.27
USP41-204ENST00000486536 ALDH1B1P30837 517 aa7.1□□□□□ -1.27
USP41-204ENST00000486536 KCNJ6P48051 423 aa7.1□□□□□ -1.27
USP41-204ENST00000486536 SYTL5Q8TDW5 730 aaPredicted RBP7.1□□□□□ -1.27
USP41-204ENST00000486536 TRIM11Q96F44 468 aa7.1□□□□□ -1.27
USP41-204ENST00000486536 SCLYQ96I15 445 aa7.1□□□□□ -1.27
USP41-204ENST00000486536 MAGEB10Q96LZ2 347 aaPredicted RBP7.1□□□□□ -1.27
USP41-204ENST00000486536 TBC1D32Q96NH3 1257 aa7.1□□□□□ -1.27
USP41-204ENST00000486536 PLVAPQ9BX97 442 aa7.1□□□□□ -1.27
USP41-204ENST00000486536 PRDM14Q9GZV8 571 aa7.1□□□□□ -1.27
USP41-204ENST00000486536 NOL6Q9H6R4 1146 aaKnown RBP7.1□□□□□ -1.27
USP41-204ENST00000486536 PAG1Q9NWQ8 432 aa7.1□□□□□ -1.27
USP41-204ENST00000486536 GEMIN8Q9NWZ8 242 aaKnown RBP7.1□□□□□ -1.27
USP41-204ENST00000486536 FHOD1Q9Y613 1164 aa7.1□□□□□ -1.27
USP41-204ENST00000486536 DDX60Q8IY21 1712 aaKnown RBP7.1□□□□□ -1.27
USP41-204ENST00000486536 XDHP47989 1333 aa7.09□□□□□ -1.27
USP41-204ENST00000486536 RAD50Q92878 1312 aa7.09□□□□□ -1.27
USP41-204ENST00000486536 KATNA1O75449 491 aa7.09□□□□□ -1.27
USP41-204ENST00000486536 TAF5LO75529 589 aa7.09□□□□□ -1.27
USP41-204ENST00000486536 SLITRK5O94991 958 aa7.09□□□□□ -1.27
USP41-204ENST00000486536 SRGNP10124 158 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms