RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 CACNB2Q08289 660 aaPredicted RBP6.38□□□□□ -1.39
COPS3-208ENST00000486032 CBLBQ13191 982 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 IRF5Q13568 498 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 ACVR2BQ13705 512 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 C4orf48Q5BLP8 95 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 TTC38Q5R3I4 469 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 TMEM63BQ5T3F8 832 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 GJC2Q5T442 439 aaPredicted RBP6.38□□□□□ -1.39
COPS3-208ENST00000486032 ARTNQ5T4W7 220 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 PCNX4Q63HM2 1172 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 DESI1Q6ICB0 168 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 VSIG10LQ86VR7 867 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 TRMT44Q8IYL2 757 aaKnown RBP6.38□□□□□ -1.39
COPS3-208ENST00000486032 FAM177A1Q8N128 213 aaPredicted RBP6.38□□□□□ -1.39
COPS3-208ENST00000486032 CYP2W1Q8TAV3 490 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 COPS5Q92905 334 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 TNFRSF25Q93038 417 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 GJA10Q969M2 543 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 LENG1Q96BZ8 264 aaPredicted RBP6.38□□□□□ -1.39
COPS3-208ENST00000486032 ARMC5Q96C12 935 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 CHAMP1Q96JM3 812 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 IWS1Q96ST2 819 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 MXRA8Q9BRK3 442 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 WDR11Q9BZH6 1224 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 TFIP11Q9UBB9 837 aaKnown RBP6.38□□□□□ -1.39
COPS3-208ENST00000486032 PCDHGC3Q9UN70 934 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 MAP4K5Q9Y4K4 846 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 MRVI1Q9Y6F6 885 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 RPTORQ8N122 1335 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 MYH7BA7E2Y1 1941 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 ALPK3Q96L96 1907 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 FRMPD4Q14CM0 1322 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 SYNGAP1Q96PV0 1343 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 FAM86B1E9PN63 330 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 DYNC1LI2O43237 492 aaPredicted RBP6.37□□□□□ -1.39
COPS3-208ENST00000486032 SLC37A4O43826 429 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 ARIH2O95376 493 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 IGHA2P01877 340 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 FAM86B2P0C5J1 330 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 TXNP10599 105 aaKnown RBP6.37□□□□□ -1.39
COPS3-208ENST00000486032 ITGB5P18084 799 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 EDNRBP24530 442 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 U2AF2P26368 475 aaKnown RBP eCLIP6.37□□□□□ -1.39
COPS3-208ENST00000486032 CHMP4BP1P59074 171 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 NUCB2P80303 420 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 MTMR1Q13613 665 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 LY6KQ17RY6 165 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 CCDC144BQ3MJ40 725 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 GNPTABQ3T906 1256 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 CEP55Q53EZ4 464 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 MYSM1Q5VVJ2 828 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 OLFML2BQ68BL8 750 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 VASH1Q7L8A9 365 aaPredicted RBP6.37□□□□□ -1.39
COPS3-208ENST00000486032 BRAPQ7Z569 592 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 PRR7Q8TB68 274 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 DIS3LQ8TF46 1054 aaKnown RBP6.37□□□□□ -1.39
COPS3-208ENST00000486032 ZNF577Q9BSK1 485 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 FTOQ9C0B1 505 aaKnown RBP eCLIP6.37□□□□□ -1.39
COPS3-208ENST00000486032 MAF1Q9H063 256 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 ABHD16BQ9H3Z7 469 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 ZSCAN16Q9H4T2 348 aaPredicted RBP6.37□□□□□ -1.39
COPS3-208ENST00000486032 VTA1Q9NP79 307 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 POLMQ9NP87 494 aaPredicted RBP6.37□□□□□ -1.39
COPS3-208ENST00000486032 JADE2Q9NQC1 790 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 RTN4Q9NQC3 1192 aaKnown RBP6.37□□□□□ -1.39
COPS3-208ENST00000486032 PGPEP1Q9NXJ5 209 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 CHMP5Q9NZZ3 219 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 DDX25Q9UHL0 483 aaKnown RBP6.37□□□□□ -1.39
COPS3-208ENST00000486032 FAM184BQ9ULE4 1060 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 ZDHHC9Q9Y397 364 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 PCDHB6Q9Y5E3 794 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 UBIAD1Q9Y5Z9 338 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 CLIC4Q9Y696 253 aa6.37□□□□□ -1.39
COPS3-208ENST00000486032 MSH4O15457 936 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 ADCY6O43306 1168 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 FIBPO43427 364 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 CHMP2AO43633 222 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 EDIL3O43854 480 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 NEMFO60524 1076 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 ATP9AO75110 1047 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 BAG4O95429 457 aaKnown RBP6.36□□□□□ -1.39
COPS3-208ENST00000486032 BRD1O95696 1058 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 GGPS1O95749 300 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 CYP3A4P08684 503 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 ZNF865P0CJ78 1059 aaPredicted RBP6.36□□□□□ -1.39
COPS3-208ENST00000486032 CYBAP13498 195 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 CCL5P13501 91 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 AKR1A1P14550 325 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 TXKP42681 527 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 TOB1P50616 345 aaPredicted RBP6.36□□□□□ -1.39
COPS3-208ENST00000486032 USP11P51784 963 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 TNFAIP2Q03169 654 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 DNM1Q05193 864 aaKnown RBP6.36□□□□□ -1.39
COPS3-208ENST00000486032 SEMA3FQ13275 785 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 DOC2BQ14184 412 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 TTLL4Q14679 1199 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 GRIN2CQ14957 1233 aa6.36□□□□□ -1.39
COPS3-208ENST00000486032 SF3A1Q15459 793 aaKnown RBP6.36□□□□□ -1.39
COPS3-208ENST00000486032 PKN2Q16513 984 aaKnown RBP6.36□□□□□ -1.39
COPS3-208ENST00000486032 CALCRLQ16602 461 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms