RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 SLC26A6Q9BXS9 759 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 UPF3BQ9BZI7 483 aaKnown RBP7.97□□□□□ -1.13
VPS50-218ENST00000485994 ZNF576Q9H609 170 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 NCOA5Q9HCD5 579 aaKnown RBP7.97□□□□□ -1.13
VPS50-218ENST00000485994 JPH1Q9HDC5 661 aaPredicted RBP7.97□□□□□ -1.13
VPS50-218ENST00000485994 SETD4Q9NVD3 440 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 SQORQ9Y6N5 450 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 TANC1Q9C0D5 1861 aa7.97□□□□□ -1.13
VPS50-218ENST00000485994 CHD9Q3L8U1 2897 aa7.96□□□□□ -1.13
VPS50-218ENST00000485994 KIF28PB7ZC32 967 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 IPO5O00410 1097 aaKnown RBP7.96□□□□□ -1.14
VPS50-218ENST00000485994 ATP2A2P16615 1042 aaKnown RBP7.96□□□□□ -1.14
VPS50-218ENST00000485994 STAT5BP51692 787 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 NLRP5P59047 1200 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 ACTR2P61160 394 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 ITGB3BPQ13352 177 aaPredicted RBP7.96□□□□□ -1.14
VPS50-218ENST00000485994 IKBKEQ14164 716 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 NPY5RQ15761 445 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 Q4G0T1 1027 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 PLEKHG4Q58EX7 1191 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 MARCH8Q5T0T0 291 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 UTP14CQ5TAP6 766 aaKnown RBP7.96□□□□□ -1.14
VPS50-218ENST00000485994 ZNF746Q6NUN9 644 aaPredicted RBP7.96□□□□□ -1.14
VPS50-218ENST00000485994 NME8Q8N427 588 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 OXER1Q8TDS5 423 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 PPP1R13LQ8WUF5 828 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 WNT8BQ93098 351 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 MBOAT7Q96N66 472 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 FTOQ9C0B1 505 aaKnown RBP eCLIP7.96□□□□□ -1.14
VPS50-218ENST00000485994 SLKQ9H2G2 1235 aaPredicted RBP7.96□□□□□ -1.14
VPS50-218ENST00000485994 AZI2Q9H6S1 392 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 TMEM260Q9NX78 707 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 PCDHA4Q9UN74 947 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 TELO2Q9Y4R8 837 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 MAFBQ9Y5Q3 323 aaPredicted RBP7.96□□□□□ -1.14
VPS50-218ENST00000485994 STK36Q9NRP7 1315 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 GBF1Q92538 1859 aa7.96□□□□□ -1.14
VPS50-218ENST00000485994 TTC3P53804 2025 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 GOLGA8CPA6NN73 597 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 GRXCR1A8MXD5 290 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 ADAMTS3O15072 1205 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 HBP1O60381 514 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 SORBS3O60504 671 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 XBP1P17861 261 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 AK2P54819 239 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 CHMP4BP1P59074 171 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 KRT76Q01546 638 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 SCRN1Q12765 414 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 MBTPS1Q14703 1052 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 GRIN2CQ14957 1233 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 RSPH3Q86UC2 560 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 SMAP1Q8IYB5 467 aaPredicted RBP7.95□□□□□ -1.14
VPS50-218ENST00000485994 BLIDQ8IZY5 108 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 LMBR1Q8WVP7 490 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 WASF1Q92558 559 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 APBB2Q92870 758 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 GLG1Q92896 1179 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 LENG9Q96B70 501 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 PGBD1Q96JS3 809 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 RIT2Q99578 217 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 ZNF577Q9BSK1 485 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 PHF20Q9BVI0 1012 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 SLC28A3Q9HAS3 691 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 VPS54Q9P1Q0 977 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 TPCN1Q9ULQ1 816 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 PCDHA2Q9Y5H9 948 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 MICAL3Q7RTP6 2002 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 CHD7Q9P2D1 2997 aa7.95□□□□□ -1.14
VPS50-218ENST00000485994 CDH23Q9H251 3354 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 PRRC2BQ5JSZ5 2229 aaKnown RBP7.94□□□□□ -1.14
VPS50-218ENST00000485994 SMIM35A0A1B0GVV1 85 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 ZBBXA8MT70 800 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 CTDNEP1O95476 244 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 CCNE2O96020 404 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 INSRRP14616 1297 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 THPOP40225 353 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 KCNJ6P48051 423 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 FOSBP53539 338 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 WDR5P61964 334 aaKnown RBP7.94□□□□□ -1.14
VPS50-218ENST00000485994 MGAT3Q09327 533 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 PPFIA1Q13136 1202 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 PLCB4Q15147 1175 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 GRIK4Q16099 956 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 ZNF484Q5JVG2 852 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 IER5Q5VY09 327 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 FAM160B1Q5W0V3 765 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 PPP4R3AQ6IN85 833 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 MIS18BP1Q6P0N0 1132 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 B3GNT9Q6UX72 402 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 TRIM50Q86XT4 487 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 HERC6Q8IVU3 1022 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 USP38Q8NB14 1042 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 DBF4BQ8NFT6 615 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 RDM1Q8NG50 284 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 TBCKQ8TEA7 893 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 RAD9AQ99638 391 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 YBX2Q9Y2T7 364 aaKnown RBP7.94□□□□□ -1.14
VPS50-218ENST00000485994 PCDHA10Q9Y5I2 948 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 KDM3AQ9Y4C1 1321 aa7.94□□□□□ -1.14
VPS50-218ENST00000485994 TRANK1O15050 2925 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms