RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 RTEL1Q9NZ71 1219 aa20.83■□□□□ 0.93
DDR1-245ENST00000484556 IGBP1P78318 339 aa20.82■□□□□ 0.92
DDR1-245ENST00000484556 PAK2Q13177 524 aa20.82■□□□□ 0.92
DDR1-245ENST00000484556 GNPTABQ3T906 1256 aa20.82■□□□□ 0.92
DDR1-245ENST00000484556 PDE12Q6L8Q7 609 aaKnown RBP20.82■□□□□ 0.92
DDR1-245ENST00000484556 CES5AQ6NT32 575 aa20.82■□□□□ 0.92
DDR1-245ENST00000484556 TMX1Q9H3N1 280 aa20.82■□□□□ 0.92
DDR1-245ENST00000484556 ACACBO00763 2458 aa20.82■□□□□ 0.92
DDR1-245ENST00000484556 TRIM6-TRIM34B2RNG4 842 aa20.81■□□□□ 0.92
DDR1-245ENST00000484556 SPATA31C2B4DYI2 1134 aa20.81■□□□□ 0.92
DDR1-245ENST00000484556 PARP1P09874 1014 aaKnown RBP20.81■□□□□ 0.92
DDR1-245ENST00000484556 MARCH8Q5T0T0 291 aa20.81■□□□□ 0.92
DDR1-245ENST00000484556 FAM102BQ5T8I3 360 aa20.81■□□□□ 0.92
DDR1-245ENST00000484556 DGKHQ86XP1 1220 aa20.81■□□□□ 0.92
DDR1-245ENST00000484556 CYP2W1Q8TAV3 490 aa20.81■□□□□ 0.92
DDR1-245ENST00000484556 NECTIN4Q96NY8 510 aa20.81■□□□□ 0.92
DDR1-245ENST00000484556 INPP4AQ96PE3 977 aaPredicted RBP20.81■□□□□ 0.92
DDR1-245ENST00000484556 ADAM7Q9H2U9 754 aa20.81■□□□□ 0.92
DDR1-245ENST00000484556 DLL3Q9NYJ7 618 aa20.81■□□□□ 0.92
DDR1-245ENST00000484556 MAP3K20Q9NYL2 800 aaKnown RBP20.81■□□□□ 0.92
DDR1-245ENST00000484556 PCDHA1Q9Y5I3 950 aa20.81■□□□□ 0.92
DDR1-245ENST00000484556 MBLAC1A4D2B0 266 aaPredicted RBP20.8■□□□□ 0.92
DDR1-245ENST00000484556 TCF7P36402 384 aaPredicted RBP20.8■□□□□ 0.92
DDR1-245ENST00000484556 TMEM266Q2M3C6 531 aa20.8■□□□□ 0.92
DDR1-245ENST00000484556 TPRNQ4KMQ1 711 aa20.8■□□□□ 0.92
DDR1-245ENST00000484556 STAG2Q8N3U4 1231 aa20.8■□□□□ 0.92
DDR1-245ENST00000484556 DCLK2Q8N568 766 aa20.8■□□□□ 0.92
DDR1-245ENST00000484556 ESR2Q92731 530 aa20.8■□□□□ 0.92
DDR1-245ENST00000484556 CASP10Q92851 521 aa20.8■□□□□ 0.92
DDR1-245ENST00000484556 TYW1Q9NV66 732 aaKnown RBP20.8■□□□□ 0.92
DDR1-245ENST00000484556 PCDHB7Q9Y5E2 793 aa20.8■□□□□ 0.92
DDR1-245ENST00000484556 TRPV2Q9Y5S1 764 aa20.8■□□□□ 0.92
DDR1-245ENST00000484556 GCOM1H8Y6P7 765 aaPredicted RBP20.79■□□□□ 0.92
DDR1-245ENST00000484556 FIBPO43427 364 aa20.79■□□□□ 0.92
DDR1-245ENST00000484556 POLR2MP0CAP2 368 aa20.79■□□□□ 0.92
DDR1-245ENST00000484556 SARSP49591 514 aaKnown RBP20.79■□□□□ 0.92
DDR1-245ENST00000484556 ZDHHC14Q8IZN3 488 aa20.79■□□□□ 0.92
DDR1-245ENST00000484556 MRPS27Q92552 414 aaKnown RBP20.79■□□□□ 0.92
DDR1-245ENST00000484556 DCTPP1Q9H773 170 aa20.79■□□□□ 0.92
DDR1-245ENST00000484556 HCFC2Q9Y5Z7 792 aa20.79■□□□□ 0.92
DDR1-245ENST00000484556 DENND4AQ7Z401 1863 aa20.79■□□□□ 0.92
DDR1-245ENST00000484556 IGSF9BQ9UPX0 1349 aa20.78■□□□□ 0.92
DDR1-245ENST00000484556 A0A0D9SFI3 127 aa20.78■□□□□ 0.92
DDR1-245ENST00000484556 MGEA5O60502 916 aa20.78■□□□□ 0.92
DDR1-245ENST00000484556 ITIH3Q06033 890 aa20.78■□□□□ 0.92
DDR1-245ENST00000484556 RSPO4Q2I0M5 234 aaPredicted RBP20.78■□□□□ 0.92
DDR1-245ENST00000484556 RARS2Q5T160 578 aaKnown RBP20.78■□□□□ 0.92
DDR1-245ENST00000484556 IER5Q5VY09 327 aa20.78■□□□□ 0.92
DDR1-245ENST00000484556 KANK3Q6NY19 840 aa20.78■□□□□ 0.92
DDR1-245ENST00000484556 C12orf76Q8N812 135 aaPredicted RBP20.78■□□□□ 0.92
DDR1-245ENST00000484556 RIN2Q8WYP3 895 aaPredicted RBP20.78■□□□□ 0.92
DDR1-245ENST00000484556 FAM227BQ96M60 508 aa20.78■□□□□ 0.92
DDR1-245ENST00000484556 RTP3Q9BQQ7 232 aa20.78■□□□□ 0.92
DDR1-245ENST00000484556 SEMA4AQ9H3S1 761 aa20.78■□□□□ 0.92
DDR1-245ENST00000484556 ERVK-5Q9HDB9 667 aa20.78■□□□□ 0.92
DDR1-245ENST00000484556 SQORQ9Y6N5 450 aa20.78■□□□□ 0.92
DDR1-245ENST00000484556 OTOGLQ3ZCN5 2332 aa20.78■□□□□ 0.92
DDR1-245ENST00000484556 CFAP47Q6ZTR5 3102 aa20.78■□□□□ 0.92
DDR1-245ENST00000484556 M0QZ92 97 aa20.77■□□□□ 0.92
DDR1-245ENST00000484556 MTHFRP42898 656 aa20.77■□□□□ 0.92
DDR1-245ENST00000484556 HOMER1Q86YM7 354 aa20.77■□□□□ 0.92
DDR1-245ENST00000484556 SIX5Q8N196 739 aa20.77■□□□□ 0.92
DDR1-245ENST00000484556 CHMP4BQ9H444 224 aaKnown RBP20.77■□□□□ 0.92
DDR1-245ENST00000484556 CWH43Q9H720 699 aa20.77■□□□□ 0.92
DDR1-245ENST00000484556 HELLSQ9NRZ9 838 aa20.77■□□□□ 0.92
DDR1-245ENST00000484556 DBR1Q9UK59 544 aaKnown RBP20.77■□□□□ 0.92
DDR1-245ENST00000484556 FBXL21Q9UKT6 434 aa20.77■□□□□ 0.92
DDR1-245ENST00000484556 LZTS1Q9Y250 596 aa20.77■□□□□ 0.92
DDR1-245ENST00000484556 ZMYM6O95789 1325 aa20.77■□□□□ 0.91
DDR1-245ENST00000484556 LAMA4Q16363 1823 aa20.76■□□□□ 0.91
DDR1-245ENST00000484556 MAP1BP46821 2468 aaKnown RBP20.76■□□□□ 0.91
DDR1-245ENST00000484556 ZBTB5O15062 677 aa20.76■□□□□ 0.91
DDR1-245ENST00000484556 PBX3P40426 434 aa20.76■□□□□ 0.91
DDR1-245ENST00000484556 NFX1Q12986 1120 aaKnown RBP20.76■□□□□ 0.91
DDR1-245ENST00000484556 TMC7Q7Z402 723 aa20.76■□□□□ 0.91
DDR1-245ENST00000484556 ZNF589Q86UQ0 364 aaPredicted RBP20.76■□□□□ 0.91
DDR1-245ENST00000484556 FEZF2Q8TBJ5 459 aa20.76■□□□□ 0.91
DDR1-245ENST00000484556 NGRNQ9NPE2 291 aaKnown RBP20.76■□□□□ 0.91
DDR1-245ENST00000484556 ERAP1Q9NZ08 941 aa20.76■□□□□ 0.91
DDR1-245ENST00000484556 PUF60Q9UHX1 559 aaKnown RBP20.76■□□□□ 0.91
DDR1-245ENST00000484556 SPTBN2O15020 2390 aa20.76■□□□□ 0.91
DDR1-245ENST00000484556 FGFR1P11362 822 aa20.75■□□□□ 0.91
DDR1-245ENST00000484556 PCP11498 1178 aaKnown RBP20.75■□□□□ 0.91
DDR1-245ENST00000484556 LAG3P18627 525 aa20.75■□□□□ 0.91
DDR1-245ENST00000484556 PDE4AP27815 886 aa20.75■□□□□ 0.91
DDR1-245ENST00000484556 IQCA1Q86XH1 822 aa20.75■□□□□ 0.91
DDR1-245ENST00000484556 ENAHQ8N8S7 591 aaPredicted RBP20.75■□□□□ 0.91
DDR1-245ENST00000484556 GLG1Q92896 1179 aa20.75■□□□□ 0.91
DDR1-245ENST00000484556 MTMR8Q96EF0 704 aa20.75■□□□□ 0.91
DDR1-245ENST00000484556 RNF41Q9H4P4 317 aaPredicted RBP20.75■□□□□ 0.91
DDR1-245ENST00000484556 FRMPD4Q14CM0 1322 aa20.75■□□□□ 0.91
DDR1-245ENST00000484556 STAM2O75886 525 aa20.74■□□□□ 0.91
DDR1-245ENST00000484556 CA8P35219 290 aa20.74■□□□□ 0.91
DDR1-245ENST00000484556 PLCB3Q01970 1234 aa20.74■□□□□ 0.91
DDR1-245ENST00000484556 ST3GAL2Q16842 350 aa20.74■□□□□ 0.91
DDR1-245ENST00000484556 KIAA1841Q6NSI8 718 aa20.74■□□□□ 0.91
DDR1-245ENST00000484556 FANCMQ8IYD8 2048 aa20.74■□□□□ 0.91
DDR1-245ENST00000484556 PLCD3Q8N3E9 789 aa20.74■□□□□ 0.91
DDR1-245ENST00000484556 SAMD3Q8N6K7 520 aa20.74■□□□□ 0.91
DDR1-245ENST00000484556 TRAPPC12Q8WVT3 735 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms