RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 POMKQ9H5K3 350 aa10.89□□□□□ -0.67
SMARCE1-210ENST00000481231 TUT1Q9H6E5 874 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-210ENST00000481231 RIOX1Q9H6W3 641 aa10.89□□□□□ -0.67
SMARCE1-210ENST00000481231 SENP2Q9HC62 589 aa10.89□□□□□ -0.67
SMARCE1-210ENST00000481231 NR2E1Q9Y466 385 aa10.89□□□□□ -0.67
SMARCE1-210ENST00000481231 TAF6LQ9Y6J9 622 aa10.89□□□□□ -0.67
SMARCE1-210ENST00000481231 KIAA1217Q5T5P2 1943 aa10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 IFIT3O14879 490 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 GSPT1P15170 499 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 NPR3P17342 541 aa10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 AOC1P19801 751 aa10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 IBSPP21815 317 aaPredicted RBP10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 MAP1BP46821 2468 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 ERVFC1P60507 584 aa10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 ARHGAP4P98171 946 aa10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 APOBRQ0VD83 1088 aa10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 TROAPQ12815 778 aa10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 TRAF1Q13077 416 aa10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 COL9A2Q14055 689 aaPredicted RBP10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 RUFY4Q6ZNE9 571 aa10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 TRIM50Q86XT4 487 aa10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 DTWD2Q8NBA8 298 aa10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 INPP4AQ96PE3 977 aaPredicted RBP10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 EHMT1Q9H9B1 1298 aa10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 MLXIPQ9HAP2 919 aa10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 HCSTQ9UBK5 93 aa10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 CHD8Q9HCK8 2581 aa10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 SPTBN2O15020 2390 aa10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 USP24Q9UPU5 2620 aa10.88□□□□□ -0.67
SMARCE1-210ENST00000481231 BAZ2BQ9UIF8 2168 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 FRMPD4Q14CM0 1322 aa10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 PLXNA4Q9HCM2 1894 aa10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 PNMA6FA0A0J9YX94 578 aa10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 SPATA31C2B4DYI2 1134 aa10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 NOP56O00567 594 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 CYP21A2P08686 494 aa10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 WEE2P0C1S8 567 aa10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 PDE4AP27815 886 aa10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 MRPS9P82933 396 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 PTH1RQ03431 593 aa10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 TRDNQ13061 729 aa10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 SEMA3FQ13275 785 aa10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 KCNC3Q14003 757 aa10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 PLPP4Q5VZY2 271 aa10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 CRIPAKQ8N1N5 446 aa10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 LMBR1Q8WVP7 490 aa10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 PIBF1Q8WXW3 757 aa10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 RIN2Q8WYP3 895 aaPredicted RBP10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 CDCA3Q99618 268 aaPredicted RBP10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 U3KPZ7 1027 aaPredicted RBP10.87□□□□□ -0.67
SMARCE1-210ENST00000481231 SRGAP2BP0DMP2 458 aa10.86□□□□□ -0.67
SMARCE1-210ENST00000481231 CD52P31358 61 aa10.86□□□□□ -0.67
SMARCE1-210ENST00000481231 MGAT3Q09327 533 aa10.86□□□□□ -0.67
SMARCE1-210ENST00000481231 WTAPQ15007 396 aa10.86□□□□□ -0.67
SMARCE1-210ENST00000481231 GNPTABQ3T906 1256 aa10.86□□□□□ -0.67
SMARCE1-210ENST00000481231 TTC22Q5TAA0 569 aa10.86□□□□□ -0.67
SMARCE1-210ENST00000481231 METTL7BQ6UX53 244 aa10.86□□□□□ -0.67
SMARCE1-210ENST00000481231 TMEM184AQ6ZMB5 413 aa10.86□□□□□ -0.67
SMARCE1-210ENST00000481231 CYFIP1Q7L576 1253 aa10.86□□□□□ -0.67
SMARCE1-210ENST00000481231 RALYLQ86SE5 291 aaKnown RBP10.86□□□□□ -0.67
SMARCE1-210ENST00000481231 RTN4RL1Q86UN2 441 aaPredicted RBP10.86□□□□□ -0.67
SMARCE1-210ENST00000481231 GPR20Q99678 358 aa10.86□□□□□ -0.67
SMARCE1-210ENST00000481231 USP26Q9BXU7 913 aa10.86□□□□□ -0.67
SMARCE1-210ENST00000481231 AGO3Q9H9G7 860 aaKnown RBP10.86□□□□□ -0.67
SMARCE1-210ENST00000481231 LIMD1Q9UGP4 676 aa10.86□□□□□ -0.67
SMARCE1-210ENST00000481231 TELO2Q9Y4R8 837 aa10.86□□□□□ -0.67
SMARCE1-210ENST00000481231 ATRXP46100 2492 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 ERICH2A1L162 156 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 HIDE1A8MVS5 230 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 E7EWF7 191 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 FSCN2O14926 492 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 FIBPO43427 364 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 STAM2O75886 525 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 FGF18O76093 207 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 GNAT1P11488 350 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 CHMLP26374 656 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 ANTXR2P58335 489 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 ADAM17P78536 824 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 NEDD9Q14511 834 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 SART3Q15020 963 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 FBXO47Q5MNV8 452 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 SPOUT1Q5T280 376 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 CATIPQ7Z7H3 387 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 NPAS4Q8IUM7 802 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 TDRD5Q8NAT2 981 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 RUBCNQ92622 972 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 SEMA4AQ9H3S1 761 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 ERVK-5Q9HDB9 667 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 TMEM260Q9NX78 707 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 RTEL1Q9NZ71 1219 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 MYH6P13533 1939 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 OTOGLQ3ZCN5 2332 aa10.85□□□□□ -0.67
SMARCE1-210ENST00000481231 TTC3P53804 2025 aa10.84□□□□□ -0.67
SMARCE1-210ENST00000481231 FSD2A1L4K1 749 aa10.84□□□□□ -0.67
SMARCE1-210ENST00000481231 SP4Q02446 784 aa10.84□□□□□ -0.67
SMARCE1-210ENST00000481231 UBE3AQ05086 875 aa10.84□□□□□ -0.67
SMARCE1-210ENST00000481231 UTP14CQ5TAP6 766 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-210ENST00000481231 USP17L6PQ6QN14 398 aa10.84□□□□□ -0.67
SMARCE1-210ENST00000481231 TSHZ1Q6ZSZ6 1077 aa10.84□□□□□ -0.67
SMARCE1-210ENST00000481231 THNSL1Q8IYQ7 743 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms