RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 HOXC8P31273 242 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 ANP32AP39687 249 aaKnown RBP10.26□□□□□ -0.77
VCP-206ENST00000480327 PLA2G5P39877 138 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 KCNJ6P48051 423 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 ERVK-21P61565 698 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 SEMA3FQ13275 785 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 PTK7Q13308 1070 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 MTMR1Q13613 665 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 DGKDQ16760 1214 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 AAK1Q2M2I8 961 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 GNPTABQ3T906 1256 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 CEP55Q53EZ4 464 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 PRR16Q569H4 304 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 NEK8Q86SG6 692 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 FERMT3Q86UX7 667 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 NOSTRINQ8IVI9 506 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 CCDC155Q8N6L0 562 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 PPTC7Q8NI37 304 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 CRYGNQ8WXF5 182 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 HLA-CQ95604 372 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 C16orf70Q9BSU1 422 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 LRFN3Q9BTN0 628 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 FOXP1Q9H334 677 aaPredicted RBP10.26□□□□□ -0.77
VCP-206ENST00000480327 JADE2Q9NQC1 790 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 MTUS1Q9ULD2 1270 aa10.26□□□□□ -0.77
VCP-206ENST00000480327 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.25□□□□□ -0.77
VCP-206ENST00000480327 ABHD14A-ACY1A0A1B0GW23 586 aa10.25□□□□□ -0.77
VCP-206ENST00000480327 DDX39AO00148 427 aaKnown RBP10.25□□□□□ -0.77
VCP-206ENST00000480327 MEIS1O00470 390 aa10.25□□□□□ -0.77
VCP-206ENST00000480327 WNT7AO00755 349 aa10.25□□□□□ -0.77
VCP-206ENST00000480327 STX6O43752 255 aa10.25□□□□□ -0.77
VCP-206ENST00000480327 CCNT1O60563 726 aaKnown RBP10.25□□□□□ -0.77
VCP-206ENST00000480327 ATP9AO75110 1047 aa10.25□□□□□ -0.77
VCP-206ENST00000480327 GGPS1O95749 300 aa10.25□□□□□ -0.77
VCP-206ENST00000480327 UBA1P22314 1058 aaKnown RBP10.25□□□□□ -0.77
VCP-206ENST00000480327 U2AF2P26368 475 aaKnown RBP eCLIP10.25□□□□□ -0.772e-9■■□□□ 11.5
VCP-206ENST00000480327 USP11P51784 963 aa10.25□□□□□ -0.77
VCP-206ENST00000480327 SP4Q02446 784 aa10.25□□□□□ -0.77
VCP-206ENST00000480327 LAMC2Q13753 1193 aa10.25□□□□□ -0.77
VCP-206ENST00000480327 NBR1Q14596 966 aa10.25□□□□□ -0.77
VCP-206ENST00000480327 CELF3Q5SZQ8 465 aaKnown RBP10.25□□□□□ -0.77
VCP-206ENST00000480327 FAM117BQ6P1L5 589 aa10.25□□□□□ -0.77
VCP-206ENST00000480327 DHX37Q8IY37 1157 aaKnown RBP10.25□□□□□ -0.77
VCP-206ENST00000480327 C7orf31Q8N865 590 aa10.25□□□□□ -0.77
VCP-206ENST00000480327 GJA10Q969M2 543 aa10.25□□□□□ -0.77
VCP-206ENST00000480327 GPRASP2Q96D09 838 aa10.25□□□□□ -0.77
VCP-206ENST00000480327 RAD9AQ99638 391 aa10.25□□□□□ -0.77
VCP-206ENST00000480327 C17orf80Q9BSJ5 609 aa10.25□□□□□ -0.77
VCP-206ENST00000480327 KCNH7Q9NS40 1196 aa10.25□□□□□ -0.77
VCP-206ENST00000480327 RBM19Q9Y4C8 960 aaKnown RBP10.25□□□□□ -0.77
VCP-206ENST00000480327 IGLV3-22A0A075B6J6 115 aa10.24□□□□□ -0.77
VCP-206ENST00000480327 SLC37A4O43826 429 aa10.24□□□□□ -0.77
VCP-206ENST00000480327 LGR5O75473 907 aa10.24□□□□□ -0.77
VCP-206ENST00000480327 ICAM3P32942 547 aa10.24□□□□□ -0.77
VCP-206ENST00000480327 CIITAP33076 1130 aa10.24□□□□□ -0.77
VCP-206ENST00000480327 MCM7P33993 719 aa10.24□□□□□ -0.77
VCP-206ENST00000480327 HTRA4P83105 476 aaPredicted RBP10.24□□□□□ -0.77
VCP-206ENST00000480327 ZNF174Q15697 407 aa10.24□□□□□ -0.77
VCP-206ENST00000480327 KCNV1Q6PIU1 500 aa10.24□□□□□ -0.77
VCP-206ENST00000480327 CYFIP1Q7L576 1253 aa10.24□□□□□ -0.77
VCP-206ENST00000480327 SERINC5Q86VE9 423 aa10.24□□□□□ -0.77
VCP-206ENST00000480327 DBF4BQ8NFT6 615 aa10.24□□□□□ -0.77
VCP-206ENST00000480327 SP7Q8TDD2 431 aaPredicted RBP10.24□□□□□ -0.77
VCP-206ENST00000480327 TGS1Q96RS0 853 aaKnown RBP10.24□□□□□ -0.77
VCP-206ENST00000480327 ZNF577Q9BSK1 485 aa10.24□□□□□ -0.77
VCP-206ENST00000480327 C1QTNF1Q9BXJ1 281 aa10.24□□□□□ -0.77
VCP-206ENST00000480327 MLXIPQ9HAP2 919 aa10.24□□□□□ -0.77
VCP-206ENST00000480327 AGO4Q9HCK5 861 aaKnown RBP10.24□□□□□ -0.77
VCP-206ENST00000480327 LMCD1Q9NZU5 365 aa10.24□□□□□ -0.77
VCP-206ENST00000480327 DAXXQ9UER7 740 aaPredicted RBP10.24□□□□□ -0.77
VCP-206ENST00000480327 DDX25Q9UHL0 483 aaKnown RBP10.24□□□□□ -0.77
VCP-206ENST00000480327 MTMR6Q9Y217 621 aa10.24□□□□□ -0.77
VCP-206ENST00000480327 MSH4O15457 936 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 TREHO43280 583 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 MARCH6O60337 910 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 PPFIA4O75335 1185 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 PARNO95453 639 aaKnown RBP10.23□□□□□ -0.77
VCP-206ENST00000480327 TGFB3P10600 412 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 KCNA2P16389 499 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 ITGB3BPQ13352 177 aaPredicted RBP10.23□□□□□ -0.77
VCP-206ENST00000480327 PKP1Q13835 747 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 IKBKEQ14164 716 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 PLEKHG4Q58EX7 1191 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 FAM173BQ6P4H8 233 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 NIPA1Q7RTP0 329 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 POTEDQ86YR6 584 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.23□□□□□ -0.77
VCP-206ENST00000480327 LENG9Q96B70 501 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 CDHR1Q96JP9 859 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 SPATA33Q96N06 139 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 ZBED2Q9BTP6 218 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 KATNAL1Q9BW62 490 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 UBE2ZQ9H832 354 aaPredicted RBP10.23□□□□□ -0.77
VCP-206ENST00000480327 NOL7Q9UMY1 257 aaKnown RBP10.23□□□□□ -0.77
VCP-206ENST00000480327 TTC3P53804 2025 aa10.23□□□□□ -0.77
VCP-206ENST00000480327 MUC6Q6W4X9 2439 aa10.22□□□□□ -0.77
VCP-206ENST00000480327 PLXNA4Q9HCM2 1894 aa10.22□□□□□ -0.77
VCP-206ENST00000480327 CYP3A7-CYP3A51PA0A087WV96 503 aa10.22□□□□□ -0.77
VCP-206ENST00000480327 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.22□□□□□ -0.77
VCP-206ENST00000480327 FAM86C2PA6NEL3 165 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms