RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 DSTYKQ6XUX3 929 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 CYFIP1Q7L576 1253 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 DEFB128Q7Z7B8 93 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 FMNL3Q8IVF7 1028 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 C7orf61Q8IZ16 206 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 CCAR2Q8N163 923 aaKnown RBP6.53□□□□□ -1.36
CPS1-207ENST00000479988 TMEM169Q96HH4 297 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 GMCL1Q96IK5 515 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 FAM20AQ96MK3 541 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 CSRNP2Q9H175 543 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 ATP6V0A4Q9HBG4 840 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 GABBR1Q9UBS5 961 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 FAM198AQ9UFP1 575 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 FAM237AA0A1B0GTK4 181 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 SHTN1A0MZ66 631 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 URI1O94763 535 aaPredicted RBP6.53□□□□□ -1.36
CPS1-207ENST00000479988 SKIP12755 728 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 NR5A1Q13285 461 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 ACVR2BQ13705 512 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 IQSEC1Q6DN90 963 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 TLK2Q86UE8 772 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 THNSL1Q8IYQ7 743 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 GOLGA6L1Q8N7Z2 621 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 MMS19Q96T76 1030 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 NUP58Q9BVL2 599 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 SLC28A3Q9HAS3 691 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 SRRDQ9UH36 339 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 DPP7Q9UHL4 492 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 INHAP05111 366 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 SLC10A3P09131 477 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 PDHBP11177 359 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 CD19P15391 556 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 FSCN1Q16658 493 aaKnown RBP6.53□□□□□ -1.36
CPS1-207ENST00000479988 LONRF3Q496Y0 759 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 LIN9Q5TKA1 542 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 AMIGO3Q86WK7 504 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 DNERQ8NFT8 737 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 RASGRP4Q8TDF6 673 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 IPO4Q8TEX9 1081 aaKnown RBP6.53□□□□□ -1.36
CPS1-207ENST00000479988 SPZ1Q9BXG8 430 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 ZCCHC17Q9NP64 241 aaKnown RBP6.53□□□□□ -1.36
CPS1-207ENST00000479988 ATP8B3O60423 1300 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 PLCH1Q4KWH8 1693 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 HBP1O60381 514 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 AMHP03971 560 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 CYLC1P35663 651 aaPredicted RBP6.53□□□□□ -1.36
CPS1-207ENST00000479988 SEC23AQ15436 765 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 DCAF17Q5H9S7 520 aaPredicted RBP6.53□□□□□ -1.36
CPS1-207ENST00000479988 SHC4Q6S5L8 630 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 CATSPERGQ6ZRH7 1159 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 ARMCX2Q7L311 632 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 DYMQ7RTS9 669 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 TMTC1Q8IUR5 882 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 GMCL1P1Q8NEA9 526 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 POMGNT1Q8WZA1 660 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 PHF20Q9BVI0 1012 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 RNF186Q9NXI6 227 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 SYNPO2Q9UMS6 1093 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 HPSEQ9Y251 543 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 PCDHB7Q9Y5E2 793 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 PCDHB6Q9Y5E3 794 aa6.53□□□□□ -1.36
CPS1-207ENST00000479988 POTEB3A0JP26 581 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 TYW5A2RUC4 315 aaKnown RBP6.52□□□□□ -1.37
CPS1-207ENST00000479988 VWA5AO00534 786 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 POTEIP0CG38 1075 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 MCM3P25205 808 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 QARSP47897 775 aaKnown RBP6.52□□□□□ -1.37
CPS1-207ENST00000479988 MLLT1Q03111 559 aaPredicted RBP6.52□□□□□ -1.37
CPS1-207ENST00000479988 PTPAQ15257 358 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 POTEBQ6S5H4 581 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 FAM43BQ6ZT52 329 aaPredicted RBP6.52□□□□□ -1.37
CPS1-207ENST00000479988 RASAL3Q86YV0 1011 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 RIOX2Q8IUF8 465 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 FBXO16Q8IX29 292 aaPredicted RBP6.52□□□□□ -1.37
CPS1-207ENST00000479988 YAF2Q8IY57 180 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.52□□□□□ -1.37
CPS1-207ENST00000479988 FANCLQ9NW38 375 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 PYCARDQ9ULZ3 195 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 GJB1P08034 283 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 ATXN8OSP0DMR3 200 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 PRELPP51888 382 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 GNG11P61952 73 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 PSMC5P62195 406 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 KRT83P78385 493 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 TROAPQ12815 778 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 VEPH1Q14D04 833 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 SPA17Q15506 151 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 SYMPKQ92797 1274 aaKnown RBP6.52□□□□□ -1.37
CPS1-207ENST00000479988 DDX4Q9NQI0 724 aaKnown RBP6.52□□□□□ -1.37
CPS1-207ENST00000479988 HESX1Q9UBX0 185 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 MAN1B1Q9UKM7 699 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 KIAA1024Q9UPX6 916 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 PLEKHA8P1O95397 391 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 CTNNA2P26232 953 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 TNNC1P63316 161 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 SPECC1Q5M775 1068 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 RHPN2Q8IUC4 686 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 THEM5Q8N1Q8 247 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 IGSF22Q8N9C0 903 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 GJB4Q9NTQ9 266 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms