RNA–Protein interactions for RNA: ENST00000479092.5

PTPN7-211, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-211ENST00000479092 SH3RF1Q7Z6J0 888 aa13.33□□□□□ -0.28
PTPN7-211ENST00000479092 CAGE1Q8TC20 777 aa13.33□□□□□ -0.28
PTPN7-211ENST00000479092 CCDC43Q96MW1 224 aaKnown RBP13.33□□□□□ -0.28
PTPN7-211ENST00000479092 ZNF396Q96N95 335 aaPredicted RBP13.33□□□□□ -0.28
PTPN7-211ENST00000479092 EIF2AK1Q9BQI3 630 aaKnown RBP13.33□□□□□ -0.28
PTPN7-211ENST00000479092 PPP1R12CQ9BZL4 782 aa13.33□□□□□ -0.28
PTPN7-211ENST00000479092 ZSWIM4Q9H7M6 989 aa13.33□□□□□ -0.28
PTPN7-211ENST00000479092 NRBP2Q9NSY0 501 aa13.33□□□□□ -0.28
PTPN7-211ENST00000479092 LRWD1Q9UFC0 647 aa13.33□□□□□ -0.28
PTPN7-211ENST00000479092 STK24Q9Y6E0 443 aa13.33□□□□□ -0.28
PTPN7-211ENST00000479092 VWA3AA6NCI4 1184 aa13.32□□□□□ -0.28
PTPN7-211ENST00000479092 TRIM43BA6NCK2 446 aa13.32□□□□□ -0.28
PTPN7-211ENST00000479092 TREHO43280 583 aa13.32□□□□□ -0.28
PTPN7-211ENST00000479092 ZNF862O60290 1169 aa13.32□□□□□ -0.28
PTPN7-211ENST00000479092 CEBPZQ03701 1054 aaKnown RBP13.32□□□□□ -0.28
PTPN7-211ENST00000479092 PKP1Q13835 747 aa13.32□□□□□ -0.28
PTPN7-211ENST00000479092 ZNF484Q5JVG2 852 aa13.32□□□□□ -0.28
PTPN7-211ENST00000479092 RSPH3Q86UC2 560 aa13.32□□□□□ -0.28
PTPN7-211ENST00000479092 SERINC5Q86VE9 423 aa13.32□□□□□ -0.28
PTPN7-211ENST00000479092 C4orf32Q8N8J7 132 aa13.32□□□□□ -0.28
PTPN7-211ENST00000479092 RETREG2Q8NC44 543 aa13.32□□□□□ -0.28
PTPN7-211ENST00000479092 TRIM43Q96BQ3 446 aaPredicted RBP13.32□□□□□ -0.28
PTPN7-211ENST00000479092 DYDC2Q96IM9 177 aa13.32□□□□□ -0.28
PTPN7-211ENST00000479092 NOC4LQ9BVI4 516 aaKnown RBP13.32□□□□□ -0.28
PTPN7-211ENST00000479092 PITPNM1O00562 1244 aa13.31□□□□□ -0.28
PTPN7-211ENST00000479092 TIMP1P01033 207 aa13.31□□□□□ -0.28
PTPN7-211ENST00000479092 RPLP2P05387 115 aaKnown RBP13.31□□□□□ -0.28
PTPN7-211ENST00000479092 ATP4AP20648 1035 aa13.31□□□□□ -0.28
PTPN7-211ENST00000479092 ZNF200P98182 395 aaPredicted RBP13.31□□□□□ -0.28
PTPN7-211ENST00000479092 CTTNQ14247 550 aaKnown RBP13.31□□□□□ -0.28
PTPN7-211ENST00000479092 FOXD4L6Q3SYB3 417 aaPredicted RBP13.31□□□□□ -0.28
PTPN7-211ENST00000479092 PRPF38BQ5VTL8 546 aaKnown RBP13.31□□□□□ -0.28
PTPN7-211ENST00000479092 KRT79Q5XKE5 535 aa13.31□□□□□ -0.28
PTPN7-211ENST00000479092 FOXD4L3Q6VB84 417 aaPredicted RBP13.31□□□□□ -0.28
PTPN7-211ENST00000479092 TPH2Q8IWU9 490 aa13.31□□□□□ -0.28
PTPN7-211ENST00000479092 C4orf19Q8IY42 314 aa13.31□□□□□ -0.28
PTPN7-211ENST00000479092 SNX29Q8TEQ0 813 aa13.31□□□□□ -0.28
PTPN7-211ENST00000479092 TRAPPC12Q8WVT3 735 aa13.31□□□□□ -0.28
PTPN7-211ENST00000479092 USP28Q96RU2 1077 aa13.31□□□□□ -0.28
PTPN7-211ENST00000479092 FTOQ9C0B1 505 aaKnown RBP eCLIP13.31□□□□□ -0.28
PTPN7-211ENST00000479092 TUFT1Q9NNX1 390 aa13.31□□□□□ -0.28
PTPN7-211ENST00000479092 RGL1Q9NZL6 768 aa13.31□□□□□ -0.28
PTPN7-211ENST00000479092 ATP6V1DQ9Y5K8 247 aa13.31□□□□□ -0.28
PTPN7-211ENST00000479092 CLIC4Q9Y696 253 aa13.31□□□□□ -0.28
PTPN7-211ENST00000479092 PDE4DIPQ5VU43 2346 aa13.31□□□□□ -0.28
PTPN7-211ENST00000479092 MBLAC1A4D2B0 266 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-211ENST00000479092 DDX11L8A8MPP1 907 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 CAND2O75155 1236 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 BRD1O95696 1058 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 YWHABP31946 246 aaKnown RBP13.3□□□□□ -0.28
PTPN7-211ENST00000479092 CYP2C18P33260 490 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 THPOP40225 353 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 CCT6AP40227 531 aaKnown RBP13.3□□□□□ -0.28
PTPN7-211ENST00000479092 NUCB2P80303 420 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 MDM2Q00987 491 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-211ENST00000479092 TBC1D8BQ0IIM8 1120 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 HIC1Q14526 733 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 PDIA5Q14554 519 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 STK38Q15208 465 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 MTERF2Q49AM1 385 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 LRRC8DQ7L1W4 858 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 OTUD6AQ7L8S5 288 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 TMEM199Q8N511 208 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 IGSF22Q8N9C0 903 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 BADQ92934 168 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 CDK5RAP3Q96JB5 506 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 CTAGE1Q96RT6 745 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 KDM3AQ9Y4C1 1321 aa13.3□□□□□ -0.28
PTPN7-211ENST00000479092 M0QZ92 97 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 MAGEB2O15479 319 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 SLITRK3O94933 977 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 C22orf31O95567 290 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 CTSHP09668 335 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 CKBP12277 381 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 SELPP16109 830 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 RPA1P27694 616 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 TMOD1P28289 359 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 MAGEA10P43363 369 aaPredicted RBP13.29□□□□□ -0.28
PTPN7-211ENST00000479092 CCL23P55773 120 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 ADAM17P78536 824 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 FPGSQ05932 587 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 RBL2Q08999 1139 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 PPIGQ13427 754 aaKnown RBP eCLIP13.29□□□□□ -0.28
PTPN7-211ENST00000479092 MARCH8Q5T0T0 291 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 PLA2G4FQ68DD2 849 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 ATL3Q6DD88 541 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 MFSD5Q6N075 450 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 MTHFD1LQ6UB35 978 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 RUFY4Q6ZNE9 571 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 METTL13Q8N6R0 699 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 RASSF8Q8NHQ8 419 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 SLC7A3Q8WY07 619 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 DHX38Q92620 1227 aaKnown RBP13.29□□□□□ -0.28
PTPN7-211ENST00000479092 CEP170P1Q96L14 293 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 AK8Q96MA6 479 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 MAP7D2Q96T17 732 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 HSD17B14Q9BPX1 270 aa13.29□□□□□ -0.28
PTPN7-211ENST00000479092 JPH2Q9BR39 696 aaPredicted RBP13.29□□□□□ -0.28
PTPN7-211ENST00000479092 POLR3CQ9BUI4 534 aaPredicted RBP13.29□□□□□ -0.28
PTPN7-211ENST00000479092 FAM49AQ9H0Q0 323 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms