RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 RIT2Q99578 217 aa8.55□□□□□ -1.04
CCDC93-207ENST00000474006 SENP7Q9BQF6 1050 aa8.55□□□□□ -1.04
CCDC93-207ENST00000474006 ARHGAP9Q9BRR9 750 aa8.55□□□□□ -1.04
CCDC93-207ENST00000474006 TTC12Q9H892 705 aaPredicted RBP8.55□□□□□ -1.04
CCDC93-207ENST00000474006 TBC1D22BQ9NU19 505 aa8.55□□□□□ -1.04
CCDC93-207ENST00000474006 FBXO2Q9UK22 296 aaPredicted RBP8.55□□□□□ -1.04
CCDC93-207ENST00000474006 ZHX1Q9UKY1 873 aaPredicted RBP8.55□□□□□ -1.04
CCDC93-207ENST00000474006 USTQ9Y2C2 406 aa8.55□□□□□ -1.04
CCDC93-207ENST00000474006 PTPN22Q9Y2R2 807 aa8.55□□□□□ -1.04
CCDC93-207ENST00000474006 MORC2Q9Y6X9 1032 aaPredicted RBP8.55□□□□□ -1.04
CCDC93-207ENST00000474006 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.54□□□□□ -1.04
CCDC93-207ENST00000474006 SORBS3O60504 671 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 GAS7O60861 476 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 CUTAO60888 179 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 GADD45BO75293 160 aaPredicted RBP8.54□□□□□ -1.04
CCDC93-207ENST00000474006 ATG7O95352 703 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 ARIH2O95376 493 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 S1PR4O95977 384 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 SMPD1P17405 629 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 ADCYAP1R1P41586 468 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 TNFAIP2Q03169 654 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 CACNB2Q08289 660 aaPredicted RBP8.54□□□□□ -1.04
CCDC93-207ENST00000474006 NEDD9Q14511 834 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 CCDC144BQ3MJ40 725 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 SPECC1Q5M775 1068 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 CELF3Q5SZQ8 465 aaKnown RBP8.54□□□□□ -1.04
CCDC93-207ENST00000474006 LRCH2Q5VUJ6 765 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 ADALQ6DHV7 355 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 CYFIP1Q7L576 1253 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 KCTD17Q8N5Z5 321 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 TMEM87AQ8NBN3 555 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 TRPV1Q8NER1 839 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 ADAM32Q8TC27 787 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 SCFD2Q8WU76 684 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 SDF4Q9BRK5 362 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 CSRNP2Q9H175 543 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 LMBRD1Q9NUN5 540 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 LRWD1Q9UFC0 647 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 NRBP1Q9UHY1 535 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 FAM184BQ9ULE4 1060 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 PTCH2Q9Y6C5 1203 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 ELP1O95163 1332 aa8.54□□□□□ -1.04
CCDC93-207ENST00000474006 PARP14Q460N5 1801 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 GOLGA6L4A6NEF3 574 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 GOLGA6L22H0YM25 854 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 DDX39AO00148 427 aaKnown RBP8.53□□□□□ -1.04
CCDC93-207ENST00000474006 GGPS1O95749 300 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 UBA1P22314 1058 aaKnown RBP8.53□□□□□ -1.04
CCDC93-207ENST00000474006 PTGS1P23219 599 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 CMA1P23946 247 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 CDC25AP30304 524 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 GRK4P32298 578 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 MCM4P33991 863 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 LONP1P36776 959 aaKnown RBP8.53□□□□□ -1.04
CCDC93-207ENST00000474006 PPP2R5CQ13362 524 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 LAMC2Q13753 1193 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 TMEM266Q2M3C6 531 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 DUSP28Q4G0W2 176 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 B3GNT9Q6UX72 402 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 USP49Q70CQ1 688 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 SH3RF1Q7Z6J0 888 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 DHX37Q8IY37 1157 aaKnown RBP8.53□□□□□ -1.04
CCDC93-207ENST00000474006 IGSF22Q8N9C0 903 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 GIMAP8Q8ND71 665 aaPredicted RBP8.53□□□□□ -1.04
CCDC93-207ENST00000474006 COPS5Q92905 334 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 EPSTI1Q96J88 318 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 TEKT3Q9BXF9 490 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 PANK2Q9BZ23 570 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 UNC45AQ9H3U1 944 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 MLXIPQ9HAP2 919 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 HCSTQ9UBK5 93 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 VAV3Q9UKW4 847 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 FCF1Q9Y324 198 aaKnown RBP8.53□□□□□ -1.04
CCDC93-207ENST00000474006 TELO2Q9Y4R8 837 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 PCDHB9Q9Y5E1 797 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 NFASCO94856 1347 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 SMCHD1A6NHR9 2005 aa8.53□□□□□ -1.04
CCDC93-207ENST00000474006 THSD7BQ9C0I4 1608 aa8.52□□□□□ -1.05
CCDC93-207ENST00000474006 A0A1W2PQ27 194 aa8.52□□□□□ -1.05
CCDC93-207ENST00000474006 A0A1W2PQ64 194 aa8.52□□□□□ -1.05
CCDC93-207ENST00000474006 A0A1W2PQD8 194 aa8.52□□□□□ -1.05
CCDC93-207ENST00000474006 PP2D1A8MPX8 630 aa8.52□□□□□ -1.05
CCDC93-207ENST00000474006 EML1O00423 815 aa8.52□□□□□ -1.05
CCDC93-207ENST00000474006 NKRFO15226 690 aaKnown RBP eCLIP8.52□□□□□ -1.05
CCDC93-207ENST00000474006 DYNC1LI2O43237 492 aaPredicted RBP8.52□□□□□ -1.05
CCDC93-207ENST00000474006 CHMP2AO43633 222 aa8.52□□□□□ -1.05
CCDC93-207ENST00000474006 CCNE2O96020 404 aa8.52□□□□□ -1.05
CCDC93-207ENST00000474006 HMGCRP04035 888 aa8.52□□□□□ -1.05
CCDC93-207ENST00000474006 CYBAP13498 195 aa8.52□□□□□ -1.05
CCDC93-207ENST00000474006 CNGA1P29973 690 aa8.52□□□□□ -1.05
CCDC93-207ENST00000474006 CCND3P30281 292 aaPredicted RBP8.52□□□□□ -1.05
CCDC93-207ENST00000474006 SP4Q02446 784 aa8.52□□□□□ -1.05
CCDC93-207ENST00000474006 SPIRE1Q08AE8 756 aa8.52□□□□□ -1.05
CCDC93-207ENST00000474006 EPHA7Q15375 998 aa8.52□□□□□ -1.05
CCDC93-207ENST00000474006 GJC2Q5T442 439 aaPredicted RBP8.52□□□□□ -1.05
CCDC93-207ENST00000474006 MAP3K21Q5TCX8 1036 aa8.52□□□□□ -1.05
CCDC93-207ENST00000474006 NCAPH2Q6IBW4 605 aa8.52□□□□□ -1.05
CCDC93-207ENST00000474006 ZNF746Q6NUN9 644 aaPredicted RBP8.52□□□□□ -1.05
CCDC93-207ENST00000474006 SHC4Q6S5L8 630 aa8.52□□□□□ -1.05
CCDC93-207ENST00000474006 METTL7BQ6UX53 244 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms