RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 MRPS27Q92552 414 aaKnown RBP11.94□□□□□ -0.5
CDHR3-209ENST00000472116 GPR20Q99678 358 aa11.94□□□□□ -0.5
CDHR3-209ENST00000472116 PXMP2Q9NR77 195 aa11.94□□□□□ -0.5
CDHR3-209ENST00000472116 TOMM22Q9NS69 142 aa11.94□□□□□ -0.5
CDHR3-209ENST00000472116 PCDHB7Q9Y5E2 793 aa11.94□□□□□ -0.5
CDHR3-209ENST00000472116 GPR179Q6PRD1 2367 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 SPDYE4A6NLX3 237 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 HMMRO75330 724 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 EOMESO95936 686 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 LAG3P18627 525 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 UBA1P22314 1058 aaKnown RBP11.93□□□□□ -0.5
CDHR3-209ENST00000472116 CD52P31358 61 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 GATMP50440 423 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 KRT17Q04695 432 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 APOBRQ0VD83 1088 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 PPM1JQ5JR12 505 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 TMC7Q7Z402 723 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 C1orf210Q8IVY1 113 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 COLGALT1Q8NBJ5 622 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 OSBP2Q969R2 916 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 DZANK1Q9NVP4 752 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 COL20A1Q9P218 1284 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 WNT16Q9UBV4 365 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 MRPL11Q9Y3B7 192 aaKnown RBP11.93□□□□□ -0.5
CDHR3-209ENST00000472116 HCFC2Q9Y5Z7 792 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 CDY2AQ9Y6F7 541 aa11.93□□□□□ -0.5
CDHR3-209ENST00000472116 TBKBP1A7MCY6 615 aa11.92□□□□□ -0.5
CDHR3-209ENST00000472116 RNF113AO15541 343 aaKnown RBP11.92□□□□□ -0.5
CDHR3-209ENST00000472116 RAB11FIP3O75154 756 aa11.92□□□□□ -0.5
CDHR3-209ENST00000472116 CFBP00751 764 aa11.92□□□□□ -0.5
CDHR3-209ENST00000472116 CFHP08603 1231 aa11.92□□□□□ -0.5
CDHR3-209ENST00000472116 WEE2P0C1S8 567 aa11.92□□□□□ -0.5
CDHR3-209ENST00000472116 PDHBP11177 359 aa11.92□□□□□ -0.5
CDHR3-209ENST00000472116 ZNF543Q08ER8 600 aa11.92□□□□□ -0.5
CDHR3-209ENST00000472116 MGAT3Q09327 533 aa11.92□□□□□ -0.5
CDHR3-209ENST00000472116 PAK2Q13177 524 aa11.92□□□□□ -0.5
CDHR3-209ENST00000472116 SMC1AQ14683 1233 aaKnown RBP11.92□□□□□ -0.5
CDHR3-209ENST00000472116 CDC37Q16543 378 aaPredicted RBP11.92□□□□□ -0.5
CDHR3-209ENST00000472116 UTP14CQ5TAP6 766 aaKnown RBP11.92□□□□□ -0.5
CDHR3-209ENST00000472116 IER5Q5VY09 327 aa11.92□□□□□ -0.5
CDHR3-209ENST00000472116 CCDC149Q6ZUS6 474 aa11.92□□□□□ -0.5
CDHR3-209ENST00000472116 LINC01599Q8WXQ3 324 aa11.92□□□□□ -0.5
CDHR3-209ENST00000472116 TBC1D5Q92609 795 aa11.92□□□□□ -0.5
CDHR3-209ENST00000472116 TBC1D17Q9HA65 648 aa11.92□□□□□ -0.5
CDHR3-209ENST00000472116 IGSF9Q9P2J2 1179 aa11.92□□□□□ -0.5
CDHR3-209ENST00000472116 ANGPTL2Q9UKU9 493 aa11.92□□□□□ -0.5
CDHR3-209ENST00000472116 CNOT1A5YKK6 2376 aaKnown RBP11.92□□□□□ -0.5
CDHR3-209ENST00000472116 C2orf16Q68DN1 1984 aa11.92□□□□□ -0.5
CDHR3-209ENST00000472116 HIDE1A8MVS5 230 aa11.91□□□□□ -0.5
CDHR3-209ENST00000472116 DHX16O60231 1041 aaKnown RBP11.91□□□□□ -0.5
CDHR3-209ENST00000472116 PPM1AP35813 382 aa11.91□□□□□ -0.5
CDHR3-209ENST00000472116 MRPS6P82932 125 aaKnown RBP11.91□□□□□ -0.5
CDHR3-209ENST00000472116 PLCB3Q01970 1234 aa11.91□□□□□ -0.5
CDHR3-209ENST00000472116 GNPTABQ3T906 1256 aa11.91□□□□□ -0.5
CDHR3-209ENST00000472116 GPATCH4Q5T3I0 446 aaKnown RBP11.91□□□□□ -0.5
CDHR3-209ENST00000472116 KBTBD3Q8NAB2 608 aa11.91□□□□□ -0.5
CDHR3-209ENST00000472116 DNAJB3Q8WWF6 145 aa11.91□□□□□ -0.5
CDHR3-209ENST00000472116 ATRIPQ8WXE1 791 aa11.91□□□□□ -0.5
CDHR3-209ENST00000472116 TMEM47Q9BQJ4 181 aa11.91□□□□□ -0.5
CDHR3-209ENST00000472116 TUBE1Q9UJT0 475 aa11.91□□□□□ -0.5
CDHR3-209ENST00000472116 GMEB2Q9UKD1 530 aa11.91□□□□□ -0.5
CDHR3-209ENST00000472116 CA14Q9ULX7 337 aa11.91□□□□□ -0.5
CDHR3-209ENST00000472116 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.91□□□□□ -0.5
CDHR3-209ENST00000472116 SIT1Q9Y3P8 196 aa11.91□□□□□ -0.5
CDHR3-209ENST00000472116 SQORQ9Y6N5 450 aa11.91□□□□□ -0.5
CDHR3-209ENST00000472116 M0R2C6 588 aa11.9□□□□□ -0.5
CDHR3-209ENST00000472116 DCNP07585 359 aaKnown RBP11.9□□□□□ -0.5
CDHR3-209ENST00000472116 CCND2P30279 289 aa11.9□□□□□ -0.5
CDHR3-209ENST00000472116 SARSP49591 514 aaKnown RBP11.9□□□□□ -0.5
CDHR3-209ENST00000472116 ADAM17P78536 824 aa11.9□□□□□ -0.5
CDHR3-209ENST00000472116 CTDSPL2Q05D32 466 aa11.9□□□□□ -0.5
CDHR3-209ENST00000472116 PPFIA1Q13136 1202 aa11.9□□□□□ -0.5
CDHR3-209ENST00000472116 NEDD9Q14511 834 aa11.9□□□□□ -0.5
CDHR3-209ENST00000472116 RTN4RL1Q86UN2 441 aaPredicted RBP11.9□□□□□ -0.5
CDHR3-209ENST00000472116 CRIPAKQ8N1N5 446 aa11.9□□□□□ -0.5
CDHR3-209ENST00000472116 PDCD2LQ9BRP1 358 aa11.9□□□□□ -0.5
CDHR3-209ENST00000472116 AGO3Q9H9G7 860 aaKnown RBP11.9□□□□□ -0.5
CDHR3-209ENST00000472116 KCNK12Q9HB15 430 aa11.9□□□□□ -0.5
CDHR3-209ENST00000472116 TYW1Q9NV66 732 aaKnown RBP11.9□□□□□ -0.5
CDHR3-209ENST00000472116 PATJQ8NI35 1801 aa11.9□□□□□ -0.5
CDHR3-209ENST00000472116 ARP10275 920 aa11.89□□□□□ -0.51
CDHR3-209ENST00000472116 NOVP48745 357 aa11.89□□□□□ -0.51
CDHR3-209ENST00000472116 SP2Q02086 613 aa11.89□□□□□ -0.51
CDHR3-209ENST00000472116 ZNF528Q3MIS6 628 aa11.89□□□□□ -0.51
CDHR3-209ENST00000472116 RRP12Q5JTH9 1297 aaKnown RBP11.89□□□□□ -0.51
CDHR3-209ENST00000472116 METTL7BQ6UX53 244 aa11.89□□□□□ -0.51
CDHR3-209ENST00000472116 FAM43BQ6ZT52 329 aaPredicted RBP11.89□□□□□ -0.51
CDHR3-209ENST00000472116 TRIM50Q86XT4 487 aa11.89□□□□□ -0.51
CDHR3-209ENST00000472116 NETO1Q8TDF5 533 aa11.89□□□□□ -0.51
CDHR3-209ENST00000472116 PADI3Q9ULW8 664 aa11.89□□□□□ -0.51
CDHR3-209ENST00000472116 SMG5Q9UPR3 1016 aaKnown RBP11.89□□□□□ -0.51
CDHR3-209ENST00000472116 SUPT16HQ9Y5B9 1047 aaKnown RBP11.89□□□□□ -0.51
CDHR3-209ENST00000472116 DENND3A2RUS2 1198 aa11.88□□□□□ -0.51
CDHR3-209ENST00000472116 LAMTOR5O43504 91 aa11.88□□□□□ -0.51
CDHR3-209ENST00000472116 HOXB3P14651 431 aaPredicted RBP11.88□□□□□ -0.51
CDHR3-209ENST00000472116 NFX1Q12986 1120 aaKnown RBP11.88□□□□□ -0.51
CDHR3-209ENST00000472116 PGM5Q15124 567 aa11.88□□□□□ -0.51
CDHR3-209ENST00000472116 ODR4Q5SWX8 454 aa11.88□□□□□ -0.51
CDHR3-209ENST00000472116 VSIG10LQ86VR7 867 aa11.88□□□□□ -0.51
CDHR3-209ENST00000472116 C12orf76Q8N812 135 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms