RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 H2AFY2Q9P0M6 372 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-210ENST00000471181 KDM2BQ8NHM5 1336 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 ARHGAP10A1A4S6 786 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 MYO1GB0I1T2 1018 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 INO80B-WBP1J3KQ70 363 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 RHOBTB1O94844 696 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 KCNA2P16389 499 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 BPIFB4P59827 614 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 UBXN2AP68543 259 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 DHX9Q08211 1270 aaKnown RBP7.38□□□□□ -1.23
BRCA1-210ENST00000471181 PDCLQ13371 301 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 TRIP4Q15650 581 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-210ENST00000471181 EXOC3L4Q17RC7 722 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 DSTYKQ6XUX3 929 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 ARHGAP18Q8N392 663 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 CCNYL1Q8N7R7 359 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 AGBL1Q96MI9 1066 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 INO80BQ9C086 356 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-210ENST00000471181 SOX13Q9UN79 622 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 MAP3K4Q9Y6R4 1608 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 CCDC78A2IDD5 438 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 LRRN2O75325 713 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 TFAP4Q01664 338 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 CYTH1Q15438 398 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 ICA1LQ8NDH6 482 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 SUPT20HQ8NEM7 779 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 ZNF555Q8NEP9 628 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 PYROXD1Q8WU10 500 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 VPS11Q9H270 941 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 PARVBQ9HBI1 364 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 HFM1A2PYH4 1435 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 DYTNA2CJ06 578 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 CHGBP05060 677 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 ALS2CLQ60I27 953 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 TTLL7Q6ZT98 887 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 BTBD6Q96KE9 485 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 SMARCAD1Q9H4L7 1026 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 ATP8A2Q9NTI2 1148 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 ZFP69BQ9UJL9 534 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 AURKCQ9UQB9 309 aa7.38□□□□□ -1.23
BRCA1-210ENST00000471181 MRPL11Q9Y3B7 192 aaKnown RBP7.38□□□□□ -1.23
BRCA1-210ENST00000471181 COPEO14579 308 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 CIITAP33076 1130 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 COPS2P61201 443 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 PRKCQQ04759 706 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 NNTQ13423 1086 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 BFSP2Q13515 415 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 ALFQ53S48 1182 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 RETREG2Q8NC44 543 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 TMC2Q8TDI7 906 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 TUBGCP3Q96CW5 907 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 XAGE2Q96GT9 111 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 FRMD6Q96NE9 622 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 SH3GL1Q99961 368 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 NOP53Q9NZM5 478 aaKnown RBP7.37□□□□□ -1.23
BRCA1-210ENST00000471181 HPCAL4Q9UM19 191 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 GTF2A1LQ9UNN4 478 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 GPAA1O43292 621 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 TOMM70O94826 608 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 SNAP25P60880 206 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 CYP4A11Q02928 519 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 PABPC4Q13310 644 aaKnown RBP eCLIP7.37□□□□□ -1.23
BRCA1-210ENST00000471181 PWP1Q13610 501 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 RNF135Q8IUD6 432 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 LRRC47Q8N1G4 583 aaKnown RBP7.37□□□□□ -1.23
BRCA1-210ENST00000471181 DCPSQ96C86 337 aaKnown RBP7.37□□□□□ -1.23
BRCA1-210ENST00000471181 TMEM60Q9H2L4 133 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 KDM4CQ9H3R0 1056 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 IL16Q14005 1332 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 CDC42BPAQ5VT25 1732 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 MEFVO15553 781 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-210ENST00000471181 PPIP5K2O43314 1243 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 CYTH3O43739 400 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 GADD45BO75293 160 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-210ENST00000471181 CA4P22748 312 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 MAP4P27816 1152 aaKnown RBP7.37□□□□□ -1.23
BRCA1-210ENST00000471181 ANKRD44Q8N8A2 993 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 PLEKHA8Q96JA3 519 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 NACC1Q96RE7 527 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 CYP4F11Q9HBI6 524 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 CAPN10Q9HC96 672 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 TMEM191CA6NGB0 347 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 FOSP01100 380 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-210ENST00000471181 GSPT1P15170 499 aaKnown RBP7.37□□□□□ -1.23
BRCA1-210ENST00000471181 PSMA3P25788 255 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 CHMLP26374 656 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 AKIRIN2Q53H80 203 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 IYDQ6PHW0 289 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 TTC8Q8TAM2 541 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 PPP1R36Q96LQ0 422 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 DEPDC7Q96QD5 511 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 CNOT10Q9H9A5 744 aaKnown RBP7.37□□□□□ -1.23
BRCA1-210ENST00000471181 PCDHGB4Q9UN71 923 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 PCDHA12Q9UN75 941 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 TRIM33Q9UPN9 1127 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 COL4A3BPQ9Y5P4 624 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 ABCC2Q92887 1545 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 WDR7Q9Y4E6 1490 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 KPNA7A9QM74 516 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 ACSL3O95573 720 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms