RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 SGSM2O43147 1006 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 TRAK2O60296 914 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 GPR37L1O60883 481 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 PPP1R11O60927 126 aaPredicted RBP8.18□□□□□ -1.1
SND1-205ENST00000467238 CFBP00751 764 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 MMP3P08254 477 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 EIF2AK2P19525 551 aaKnown RBP8.18□□□□□ -1.1
SND1-205ENST00000467238 HSD17B4P51659 736 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 PTPN11Q06124 597 aaPredicted RBP8.18□□□□□ -1.1
SND1-205ENST00000467238 ARHGAP1Q07960 439 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 TRDNQ13061 729 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 GRM4Q14833 912 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 RAB30Q15771 203 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 STXBP2Q15833 593 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 LY6KQ17RY6 165 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 SLC35G1Q2M3R5 365 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 FAM47CQ5HY64 1035 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 ARHGEF16Q5VV41 709 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 PPP1R13LQ8WUF5 828 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 AFG1LQ8WV93 481 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 RUFY2Q8WXA3 655 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 ARHGAP9Q9BRR9 750 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 AMNQ9BXJ7 453 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 KRTAP9-9Q9BYP9 154 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 KRTAP9-4Q9BYQ2 154 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 GDPD2Q9HCC8 539 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 PXMP2Q9NR77 195 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 MSRAQ9UJ68 235 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 DDX41Q9UJV9 622 aaKnown RBP8.18□□□□□ -1.1
SND1-205ENST00000467238 TAF6LQ9Y6J9 622 aa8.18□□□□□ -1.1
SND1-205ENST00000467238 CYTH3O43739 400 aa8.17□□□□□ -1.1
SND1-205ENST00000467238 EIF3JO75822 258 aaKnown RBP8.17□□□□□ -1.1
SND1-205ENST00000467238 GH1P01241 217 aa8.17□□□□□ -1.1
SND1-205ENST00000467238 PFKMP08237 780 aa8.17□□□□□ -1.1
SND1-205ENST00000467238 COL8A1P27658 744 aa8.17□□□□□ -1.1
SND1-205ENST00000467238 IRX6P78412 446 aaPredicted RBP8.17□□□□□ -1.1
SND1-205ENST00000467238 TROAPQ12815 778 aa8.17□□□□□ -1.1
SND1-205ENST00000467238 NR6A1Q15406 480 aa8.17□□□□□ -1.1
SND1-205ENST00000467238 STOX1Q6ZVD7 989 aa8.17□□□□□ -1.1
SND1-205ENST00000467238 SESTD1Q86VW0 696 aa8.17□□□□□ -1.1
SND1-205ENST00000467238 USP38Q8NB14 1042 aa8.17□□□□□ -1.1
SND1-205ENST00000467238 KAT2BQ92831 832 aa8.17□□□□□ -1.1
SND1-205ENST00000467238 GAS2L1Q99501 681 aaPredicted RBP8.17□□□□□ -1.1
SND1-205ENST00000467238 RIOX1Q9H6W3 641 aa8.17□□□□□ -1.1
SND1-205ENST00000467238 MAP3K20Q9NYL2 800 aaKnown RBP8.17□□□□□ -1.1
SND1-205ENST00000467238 YBX2Q9Y2T7 364 aaKnown RBP8.17□□□□□ -1.1
SND1-205ENST00000467238 PCDHA1Q9Y5I3 950 aa8.17□□□□□ -1.1
SND1-205ENST00000467238 SLC4A7Q9Y6M7 1214 aa8.17□□□□□ -1.1
SND1-205ENST00000467238 C5orf42Q9H799 3197 aa8.17□□□□□ -1.1
SND1-205ENST00000467238 COL4A4P53420 1690 aaPredicted RBP8.17□□□□□ -1.1
SND1-205ENST00000467238 TTC3P53804 2025 aa8.17□□□□□ -1.1
SND1-205ENST00000467238 E7EWF7 191 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 IFIT3O14879 490 aaKnown RBP8.16□□□□□ -1.1
SND1-205ENST00000467238 IQCF3P0C7M6 154 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 RFC2P35250 354 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 RABGGTBP53611 331 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 ANTXR2P58335 489 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 ADGRE1Q14246 886 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 WTAPQ15007 396 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 DGKDQ16760 1214 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 GDF6Q6KF10 455 aaPredicted RBP8.16□□□□□ -1.1
SND1-205ENST00000467238 CHST3Q7LGC8 479 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 DEFB128Q7Z7B8 93 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 RALYLQ86SE5 291 aaKnown RBP8.16□□□□□ -1.1
SND1-205ENST00000467238 HOMER1Q86YM7 354 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 MB21D2Q8IYB1 491 aaPredicted RBP8.16□□□□□ -1.1
SND1-205ENST00000467238 SAMD3Q8N6K7 520 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 NCOA7Q8NI08 942 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 CAGE1Q8TC20 777 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 PIEZO1Q92508 2521 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 MAP4K1Q92918 833 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 CTAGE1Q96RT6 745 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 PIGSQ96S52 555 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 KCTD15Q96SI1 283 aaPredicted RBP8.16□□□□□ -1.1
SND1-205ENST00000467238 PDCD2LQ9BRP1 358 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 NKX2-4Q9H2Z4 354 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 PRDM12Q9H4Q4 367 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 MRVI1Q9Y6F6 885 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 TRIOO75962 3097 aa8.16□□□□□ -1.1
SND1-205ENST00000467238 ATG2AQ2TAZ0 1938 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 PNMA6FA0A0J9YX94 578 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 ERICH2A1L162 156 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 ZBBXA8MT70 800 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 HAS3O00219 553 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 F2P00734 622 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 MYCLP12524 364 aaPredicted RBP8.15□□□□□ -1.1
SND1-205ENST00000467238 ACTN1P12814 892 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 HOXD8P13378 290 aaPredicted RBP8.15□□□□□ -1.1
SND1-205ENST00000467238 MYOGP15173 224 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 ATP2A2P16615 1042 aaKnown RBP8.15□□□□□ -1.1
SND1-205ENST00000467238 CASTP20810 708 aaKnown RBP8.15□□□□□ -1.1
SND1-205ENST00000467238 HOXA13P31271 388 aaPredicted RBP8.15□□□□□ -1.1
SND1-205ENST00000467238 RBL2Q08999 1139 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 BFSP2Q13515 415 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 LAMC2Q13753 1193 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 SART3Q15020 963 aaKnown RBP8.15□□□□□ -1.1
SND1-205ENST00000467238 PGM5Q15124 567 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 PTGISQ16647 500 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 VSIG10LQ86VR7 867 aa8.15□□□□□ -1.1
SND1-205ENST00000467238 KDF1Q8NAX2 398 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms