RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 ERICH2A1L162 156 aa12.81□□□□□ -0.36
SSR3-202ENST00000463503 ENPP3O14638 875 aa12.81□□□□□ -0.36
SSR3-202ENST00000463503 CFBP00751 764 aa12.81□□□□□ -0.36
SSR3-202ENST00000463503 ID4P47928 161 aa12.81□□□□□ -0.36
SSR3-202ENST00000463503 EVCP57679 992 aa12.81□□□□□ -0.36
SSR3-202ENST00000463503 NAALADL2Q58DX5 795 aa12.81□□□□□ -0.36
SSR3-202ENST00000463503 RUFY4Q6ZNE9 571 aa12.81□□□□□ -0.36
SSR3-202ENST00000463503 RBM23Q86U06 439 aaKnown RBP12.81□□□□□ -0.36
SSR3-202ENST00000463503 VSIG10LQ86VR7 867 aa12.81□□□□□ -0.36
SSR3-202ENST00000463503 CMTR2Q8IYT2 770 aaKnown RBP12.81□□□□□ -0.36
SSR3-202ENST00000463503 ENAHQ8N8S7 591 aaPredicted RBP12.81□□□□□ -0.36
SSR3-202ENST00000463503 KLHL23Q8NBE8 558 aa12.81□□□□□ -0.36
SSR3-202ENST00000463503 POF1BQ8WVV4 589 aa12.81□□□□□ -0.36
SSR3-202ENST00000463503 UBAC1Q9BSL1 405 aa12.81□□□□□ -0.36
SSR3-202ENST00000463503 MRPL11Q9Y3B7 192 aaKnown RBP12.81□□□□□ -0.36
SSR3-202ENST00000463503 TELO2Q9Y4R8 837 aa12.81□□□□□ -0.36
SSR3-202ENST00000463503 WDR81Q562E7 1941 aa12.81□□□□□ -0.36
SSR3-202ENST00000463503 CHD6Q8TD26 2715 aa12.8□□□□□ -0.36
SSR3-202ENST00000463503 SH2B2O14492 632 aaPredicted RBP12.8□□□□□ -0.36
SSR3-202ENST00000463503 PPP1R11O60927 126 aaPredicted RBP12.8□□□□□ -0.36
SSR3-202ENST00000463503 TGFB3P10600 412 aa12.8□□□□□ -0.36
SSR3-202ENST00000463503 MYCLP12524 364 aaPredicted RBP12.8□□□□□ -0.36
SSR3-202ENST00000463503 RCAN1P53805 252 aa12.8□□□□□ -0.36
SSR3-202ENST00000463503 KCNC3Q14003 757 aa12.8□□□□□ -0.36
SSR3-202ENST00000463503 COL9A3Q14050 684 aaPredicted RBP12.8□□□□□ -0.36
SSR3-202ENST00000463503 FRMD5Q7Z6J6 570 aa12.8□□□□□ -0.36
SSR3-202ENST00000463503 ZFP91Q96JP5 570 aaPredicted RBP12.8□□□□□ -0.36
SSR3-202ENST00000463503 MAP3K14Q99558 947 aa12.8□□□□□ -0.36
SSR3-202ENST00000463503 JMJD4Q9H9V9 463 aa12.8□□□□□ -0.36
SSR3-202ENST00000463503 LY9Q9HBG7 655 aa12.8□□□□□ -0.36
SSR3-202ENST00000463503 FRMPD4Q14CM0 1322 aa12.8□□□□□ -0.36
SSR3-202ENST00000463503 MAP1BP46821 2468 aaKnown RBP12.8□□□□□ -0.36
SSR3-202ENST00000463503 IFIT3O14879 490 aaKnown RBP12.79□□□□□ -0.36
SSR3-202ENST00000463503 GNAT1P11488 350 aa12.79□□□□□ -0.36
SSR3-202ENST00000463503 ARHGAP4P98171 946 aa12.79□□□□□ -0.36
SSR3-202ENST00000463503 SEMA3FQ13275 785 aa12.79□□□□□ -0.36
SSR3-202ENST00000463503 WTAPQ15007 396 aa12.79□□□□□ -0.36
SSR3-202ENST00000463503 ANKRD1Q15327 319 aa12.79□□□□□ -0.36
SSR3-202ENST00000463503 FBXO47Q5MNV8 452 aa12.79□□□□□ -0.36
SSR3-202ENST00000463503 PNMA1Q8ND90 353 aa12.79□□□□□ -0.36
SSR3-202ENST00000463503 GPR20Q99678 358 aa12.79□□□□□ -0.36
SSR3-202ENST00000463503 ZKSCAN3Q9BRR0 538 aa12.79□□□□□ -0.36
SSR3-202ENST00000463503 S1PR5Q9H228 398 aa12.79□□□□□ -0.36
SSR3-202ENST00000463503 MLXIPQ9HAP2 919 aa12.79□□□□□ -0.36
SSR3-202ENST00000463503 NID2Q14112 1375 aa12.79□□□□□ -0.36
SSR3-202ENST00000463503 MED19A0JLT2 244 aaPredicted RBP12.78□□□□□ -0.36
SSR3-202ENST00000463503 PER2O15055 1255 aa12.78□□□□□ -0.36
SSR3-202ENST00000463503 BRD1O95696 1058 aa12.78□□□□□ -0.36
SSR3-202ENST00000463503 HOXA13P31271 388 aaPredicted RBP12.78□□□□□ -0.36
SSR3-202ENST00000463503 DUSP6Q16828 381 aa12.78□□□□□ -0.36
SSR3-202ENST00000463503 PAN2Q504Q3 1202 aaKnown RBP12.78□□□□□ -0.36
SSR3-202ENST00000463503 ASPRV1Q53RT3 343 aa12.78□□□□□ -0.36
SSR3-202ENST00000463503 IFIT1BQ5T764 474 aaKnown RBP12.78□□□□□ -0.36
SSR3-202ENST00000463503 METTL7BQ6UX53 244 aa12.78□□□□□ -0.36
SSR3-202ENST00000463503 TSHZ1Q6ZSZ6 1077 aa12.78□□□□□ -0.36
SSR3-202ENST00000463503 RTN4RL1Q86UN2 441 aaPredicted RBP12.78□□□□□ -0.36
SSR3-202ENST00000463503 SMOC2Q9H3U7 446 aa12.78□□□□□ -0.36
SSR3-202ENST00000463503 AGO3Q9H9G7 860 aaKnown RBP12.78□□□□□ -0.36
SSR3-202ENST00000463503 PDRG1Q9NUG6 133 aa12.78□□□□□ -0.36
SSR3-202ENST00000463503 USP24Q9UPU5 2620 aa12.78□□□□□ -0.36
SSR3-202ENST00000463503 SPTBN2O15020 2390 aa12.78□□□□□ -0.36
SSR3-202ENST00000463503 CHD8Q9HCK8 2581 aa12.77□□□□□ -0.36
SSR3-202ENST00000463503 NOP56O00567 594 aaKnown RBP12.77□□□□□ -0.37
SSR3-202ENST00000463503 SP100P23497 879 aaPredicted RBP12.77□□□□□ -0.37
SSR3-202ENST00000463503 GATMP50440 423 aa12.77□□□□□ -0.37
SSR3-202ENST00000463503 NEK4P51957 841 aa12.77□□□□□ -0.37
SSR3-202ENST00000463503 MRPS9P82933 396 aaKnown RBP12.77□□□□□ -0.37
SSR3-202ENST00000463503 TOB2Q14106 344 aaPredicted RBP12.77□□□□□ -0.37
SSR3-202ENST00000463503 TAF2Q6P1X5 1199 aa12.77□□□□□ -0.37
SSR3-202ENST00000463503 SYCE2Q6PIF2 218 aa12.77□□□□□ -0.37
SSR3-202ENST00000463503 TMEM184AQ6ZMB5 413 aa12.77□□□□□ -0.37
SSR3-202ENST00000463503 Q6ZUG5 572 aa12.77□□□□□ -0.37
SSR3-202ENST00000463503 NPAS4Q8IUM7 802 aa12.77□□□□□ -0.37
SSR3-202ENST00000463503 ADSSL1Q8N142 457 aa12.77□□□□□ -0.37
SSR3-202ENST00000463503 KREMEN2Q8NCW0 462 aa12.77□□□□□ -0.37
SSR3-202ENST00000463503 NKD2Q969F2 451 aaPredicted RBP12.77□□□□□ -0.37
SSR3-202ENST00000463503 MTMR8Q96EF0 704 aa12.77□□□□□ -0.37
SSR3-202ENST00000463503 INPP4AQ96PE3 977 aaPredicted RBP12.77□□□□□ -0.37
SSR3-202ENST00000463503 TLE6Q9H808 572 aa12.77□□□□□ -0.37
SSR3-202ENST00000463503 KAT14Q9H8E8 782 aa12.77□□□□□ -0.37
SSR3-202ENST00000463503 MAP3K20Q9NYL2 800 aaKnown RBP12.77□□□□□ -0.37
SSR3-202ENST00000463503 CDH22Q9UJ99 828 aa12.77□□□□□ -0.37
SSR3-202ENST00000463503 ZNF215Q9UL58 517 aaPredicted RBP12.77□□□□□ -0.37
SSR3-202ENST00000463503 NRCAMQ92823 1304 aa12.77□□□□□ -0.37
SSR3-202ENST00000463503 MBLAC1A4D2B0 266 aaPredicted RBP12.76□□□□□ -0.37
SSR3-202ENST00000463503 FSCN2O14926 492 aa12.76□□□□□ -0.37
SSR3-202ENST00000463503 DDAH1O94760 285 aa12.76□□□□□ -0.37
SSR3-202ENST00000463503 CALM1P0DP23 149 aa12.76□□□□□ -0.37
SSR3-202ENST00000463503 CALM2P0DP24 149 aa12.76□□□□□ -0.37
SSR3-202ENST00000463503 CALM3P0DP25 149 aa12.76□□□□□ -0.37
SSR3-202ENST00000463503 CPA1P15085 419 aa12.76□□□□□ -0.37
SSR3-202ENST00000463503 CCND2P30279 289 aa12.76□□□□□ -0.37
SSR3-202ENST00000463503 CD52P31358 61 aa12.76□□□□□ -0.37
SSR3-202ENST00000463503 MCM2P49736 904 aa12.76□□□□□ -0.37
SSR3-202ENST00000463503 TROAPQ12815 778 aa12.76□□□□□ -0.37
SSR3-202ENST00000463503 MTMR3Q13615 1198 aa12.76□□□□□ -0.37
SSR3-202ENST00000463503 MCTP2Q6DN12 878 aa12.76□□□□□ -0.37
SSR3-202ENST00000463503 CYFIP1Q7L576 1253 aa12.76□□□□□ -0.37
SSR3-202ENST00000463503 ZNF274Q96GC6 653 aaPredicted RBP12.76□□□□□ -0.37
SSR3-202ENST00000463503 AMNQ9BXJ7 453 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms