RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 CEP131Q9UPN4 1083 aa15.87■□□□□ 0.13
SMPD4-215ENST00000457039 TRPC6Q9Y210 931 aa15.87■□□□□ 0.13
SMPD4-215ENST00000457039 NR2E3Q9Y5X4 410 aa15.87■□□□□ 0.13
SMPD4-215ENST00000457039 MYH9P35579 1960 aaKnown RBP15.86■□□□□ 0.13
SMPD4-215ENST00000457039 TREHO43280 583 aa15.86■□□□□ 0.13
SMPD4-215ENST00000457039 CYP2C9P11712 490 aa15.86■□□□□ 0.13
SMPD4-215ENST00000457039 ITGB8P26012 769 aa15.86■□□□□ 0.13
SMPD4-215ENST00000457039 NASPP49321 788 aaPredicted RBP15.86■□□□□ 0.13
SMPD4-215ENST00000457039 TMEM266Q2M3C6 531 aa15.86■□□□□ 0.13
SMPD4-215ENST00000457039 SERINC5Q86VE9 423 aa15.86■□□□□ 0.13
SMPD4-215ENST00000457039 C4orf19Q8IY42 314 aa15.86■□□□□ 0.13
SMPD4-215ENST00000457039 TNPO1Q92973 898 aaKnown RBP15.86■□□□□ 0.13
SMPD4-215ENST00000457039 WNT8BQ93098 351 aa15.86■□□□□ 0.13
SMPD4-215ENST00000457039 LXNQ9BS40 222 aa15.86■□□□□ 0.13
SMPD4-215ENST00000457039 TMEM39AQ9NV64 488 aa15.86■□□□□ 0.13
SMPD4-215ENST00000457039 PCDH10Q9P2E7 1040 aa15.86■□□□□ 0.13
SMPD4-215ENST00000457039 COL1A2P08123 1366 aa15.86■□□□□ 0.13
SMPD4-215ENST00000457039 RRN3P2A6NIE6 340 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 LYPLA2O95372 231 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 SPATA31C1P0DKV0 1188 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 GNAT1P11488 350 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 CYP4A11Q02928 519 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 RBL2Q08999 1139 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 PTK7Q13308 1070 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 CTTNQ14247 550 aaKnown RBP15.85■□□□□ 0.13
SMPD4-215ENST00000457039 TARBP2Q15633 366 aaKnown RBP15.85■□□□□ 0.13
SMPD4-215ENST00000457039 TRIM71Q2Q1W2 868 aaKnown RBP15.85■□□□□ 0.13
SMPD4-215ENST00000457039 XKR3Q5GH77 459 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 ZNF484Q5JVG2 852 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 ANO5Q75V66 913 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 CKAP2LQ8IYA6 745 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 TRAPPC12Q8WVT3 735 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 CEP89Q96ST8 783 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 POLR3CQ9BUI4 534 aaPredicted RBP15.85■□□□□ 0.13
SMPD4-215ENST00000457039 NOC4LQ9BVI4 516 aaKnown RBP15.85■□□□□ 0.13
SMPD4-215ENST00000457039 NIFKQ9BYG3 293 aaKnown RBP15.85■□□□□ 0.13
SMPD4-215ENST00000457039 ZSWIM4Q9H7M6 989 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 PRDM5Q9NQX1 630 aaPredicted RBP15.85■□□□□ 0.13
SMPD4-215ENST00000457039 NRBP2Q9NSY0 501 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 LRWD1Q9UFC0 647 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 TUBE1Q9UJT0 475 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 ZMYND8Q9ULU4 1186 aaPredicted RBP15.85■□□□□ 0.13
SMPD4-215ENST00000457039 PDE4DIPQ5VU43 2346 aa15.85■□□□□ 0.13
SMPD4-215ENST00000457039 LTBP2Q14767 1821 aa15.84■□□□□ 0.13
SMPD4-215ENST00000457039 TRIP12Q14669 1992 aaPredicted RBP15.84■□□□□ 0.13
SMPD4-215ENST00000457039 VWA3AA6NCI4 1184 aa15.84■□□□□ 0.13
SMPD4-215ENST00000457039 DKC1O60832 514 aaKnown RBP eCLIP15.84■□□□□ 0.13
SMPD4-215ENST00000457039 MED24O75448 989 aa15.84■□□□□ 0.13
SMPD4-215ENST00000457039 TIMP1P01033 207 aa15.84■□□□□ 0.13
SMPD4-215ENST00000457039 SYN1P17600 705 aa15.84■□□□□ 0.13
SMPD4-215ENST00000457039 RPA1P27694 616 aa15.84■□□□□ 0.13
SMPD4-215ENST00000457039 IGBP1P78318 339 aa15.84■□□□□ 0.13
SMPD4-215ENST00000457039 SLC39A14Q15043 492 aa15.84■□□□□ 0.13
SMPD4-215ENST00000457039 CATSPER3Q86XQ3 398 aa15.84■□□□□ 0.13
SMPD4-215ENST00000457039 ZBTB10Q96DT7 871 aa15.84■□□□□ 0.13
SMPD4-215ENST00000457039 ZNF396Q96N95 335 aaPredicted RBP15.84■□□□□ 0.13
SMPD4-215ENST00000457039 MMTAG2Q9BU76 263 aaKnown RBP15.84■□□□□ 0.13
SMPD4-215ENST00000457039 RAB34Q9BZG1 259 aa15.84■□□□□ 0.13
SMPD4-215ENST00000457039 TUFT1Q9NNX1 390 aa15.84■□□□□ 0.13
SMPD4-215ENST00000457039 FBXO2Q9UK22 296 aaPredicted RBP15.84■□□□□ 0.13
SMPD4-215ENST00000457039 NOD1Q9Y239 953 aa15.84■□□□□ 0.13
SMPD4-215ENST00000457039 RBM19Q9Y4C8 960 aaKnown RBP15.84■□□□□ 0.13
SMPD4-215ENST00000457039 UMODL1Q5DID0 1318 aa15.84■□□□□ 0.13
SMPD4-215ENST00000457039 TMEM150BA6NC51 233 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 PP2D1A8MPX8 630 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 H0YGN5 161 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 PITPNM1O00562 1244 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 C22orf31O95567 290 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 YEATS4O95619 227 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 CEBPZQ03701 1054 aaKnown RBP15.83■□□□□ 0.12
SMPD4-215ENST00000457039 GRIN1Q05586 938 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 HAUS3Q68CZ6 603 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 ATL3Q6DD88 541 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 MTHFD1LQ6UB35 978 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 RUFY4Q6ZNE9 571 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 TRMT1LQ7Z2T5 733 aaKnown RBP15.83■□□□□ 0.12
SMPD4-215ENST00000457039 RPAINQ86UA6 219 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 TPH2Q8IWU9 490 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 LINC00301Q8NCQ3 95 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 ERMNQ8TAM6 284 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 CAGE1Q8TC20 777 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 HIPK3Q9H422 1215 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 TFIP11Q9UBB9 837 aaKnown RBP15.83■□□□□ 0.12
SMPD4-215ENST00000457039 PRKAG2Q9UGJ0 569 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 SEPT9Q9UHD8 586 aaPredicted RBP15.83■□□□□ 0.12
SMPD4-215ENST00000457039 PCDHA2Q9Y5H9 948 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 STK24Q9Y6E0 443 aa15.83■□□□□ 0.12
SMPD4-215ENST00000457039 ZBTB39O15060 712 aa15.82■□□□□ 0.12
SMPD4-215ENST00000457039 RAG1P15918 1043 aa15.82■□□□□ 0.12
SMPD4-215ENST00000457039 MUTP22033 750 aa15.82■□□□□ 0.12
SMPD4-215ENST00000457039 KLRC1P26715 233 aa15.82■□□□□ 0.12
SMPD4-215ENST00000457039 MARCKSP29966 332 aaPredicted RBP15.82■□□□□ 0.12
SMPD4-215ENST00000457039 CDC25AP30304 524 aa15.82■□□□□ 0.12
SMPD4-215ENST00000457039 YWHABP31946 246 aaKnown RBP15.82■□□□□ 0.12
SMPD4-215ENST00000457039 NUCB2P80303 420 aa15.82■□□□□ 0.12
SMPD4-215ENST00000457039 DNM1Q05193 864 aaKnown RBP15.82■□□□□ 0.12
SMPD4-215ENST00000457039 BFSP2Q13515 415 aa15.82■□□□□ 0.12
SMPD4-215ENST00000457039 ECM1Q16610 540 aa15.82■□□□□ 0.12
SMPD4-215ENST00000457039 FOXD4L6Q3SYB3 417 aaPredicted RBP15.82■□□□□ 0.12
SMPD4-215ENST00000457039 TAF2Q6P1X5 1199 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms