RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 DISC1Q9NRI5 854 aa22.5■■□□□ 1.19
COL9A3-202ENST00000452372 SAMM50Q9Y512 469 aa22.5■■□□□ 1.19
COL9A3-202ENST00000452372 WDR81Q562E7 1941 aa22.5■■□□□ 1.19
COL9A3-202ENST00000452372 H3BQV1 296 aa22.49■■□□□ 1.19
COL9A3-202ENST00000452372 PITPNM1O00562 1244 aa22.49■■□□□ 1.19
COL9A3-202ENST00000452372 WNT7AO00755 349 aa22.49■■□□□ 1.19
COL9A3-202ENST00000452372 JAK3P52333 1124 aa22.49■■□□□ 1.19
COL9A3-202ENST00000452372 ADAM17P78536 824 aa22.49■■□□□ 1.19
COL9A3-202ENST00000452372 PTK7Q13308 1070 aa22.49■■□□□ 1.19
COL9A3-202ENST00000452372 BFSP2Q13515 415 aa22.49■■□□□ 1.19
COL9A3-202ENST00000452372 PLCB4Q15147 1175 aa22.49■■□□□ 1.19
COL9A3-202ENST00000452372 SLFN12Q8IYM2 578 aa22.49■■□□□ 1.19
COL9A3-202ENST00000452372 RDM1Q8NG50 284 aa22.49■■□□□ 1.19
COL9A3-202ENST00000452372 ATP6V0A1Q93050 837 aa22.49■■□□□ 1.19
COL9A3-202ENST00000452372 MAFBQ9Y5Q3 323 aaPredicted RBP22.49■■□□□ 1.19
COL9A3-202ENST00000452372 MARCH6O60337 910 aa22.48■■□□□ 1.19
COL9A3-202ENST00000452372 BAG4O95429 457 aaKnown RBP22.48■■□□□ 1.19
COL9A3-202ENST00000452372 IQCF3P0C7M6 154 aa22.48■■□□□ 1.19
COL9A3-202ENST00000452372 ATP2B1P20020 1258 aa22.48■■□□□ 1.19
COL9A3-202ENST00000452372 TRAPPC10P48553 1259 aa22.48■■□□□ 1.19
COL9A3-202ENST00000452372 RABGGTBP53611 331 aa22.48■■□□□ 1.19
COL9A3-202ENST00000452372 PPFIA1Q13136 1202 aa22.48■■□□□ 1.19
COL9A3-202ENST00000452372 GPNMBQ14956 572 aa22.48■■□□□ 1.19
COL9A3-202ENST00000452372 PDXDC2PQ6P474 469 aa22.48■■□□□ 1.19
COL9A3-202ENST00000452372 DEFB128Q7Z7B8 93 aa22.48■■□□□ 1.19
COL9A3-202ENST00000452372 SERINC5Q86VE9 423 aa22.48■■□□□ 1.19
COL9A3-202ENST00000452372 CCDC155Q8N6L0 562 aa22.48■■□□□ 1.19
COL9A3-202ENST00000452372 CAGE1Q8TC20 777 aa22.48■■□□□ 1.19
COL9A3-202ENST00000452372 LMBR1Q8WVP7 490 aa22.48■■□□□ 1.19
COL9A3-202ENST00000452372 DHX38Q92620 1227 aaKnown RBP22.48■■□□□ 1.19
COL9A3-202ENST00000452372 NKX2-4Q9H2Z4 354 aa22.48■■□□□ 1.19
COL9A3-202ENST00000452372 PRDM12Q9H4Q4 367 aa22.48■■□□□ 1.19
COL9A3-202ENST00000452372 RRN3P2A6NIE6 340 aa22.47■■□□□ 1.19
COL9A3-202ENST00000452372 TREHO43280 583 aa22.47■■□□□ 1.19
COL9A3-202ENST00000452372 CHMP2AO43633 222 aa22.47■■□□□ 1.19
COL9A3-202ENST00000452372 NEMFO60524 1076 aa22.47■■□□□ 1.19
COL9A3-202ENST00000452372 INSRRP14616 1297 aa22.47■■□□□ 1.19
COL9A3-202ENST00000452372 MYOGP15173 224 aa22.47■■□□□ 1.19
COL9A3-202ENST00000452372 RBL2Q08999 1139 aa22.47■■□□□ 1.19
COL9A3-202ENST00000452372 PPP2R5CQ13362 524 aa22.47■■□□□ 1.19
COL9A3-202ENST00000452372 ORC2Q13416 577 aaPredicted RBP22.47■■□□□ 1.19
COL9A3-202ENST00000452372 ADGRE1Q14246 886 aa22.47■■□□□ 1.19
COL9A3-202ENST00000452372 RAB30Q15771 203 aa22.47■■□□□ 1.19
COL9A3-202ENST00000452372 MIER3Q7Z3K6 550 aa22.47■■□□□ 1.19
COL9A3-202ENST00000452372 RETREG2Q8NC44 543 aa22.47■■□□□ 1.19
COL9A3-202ENST00000452372 MTIF3Q9H2K0 278 aaKnown RBP22.47■■□□□ 1.19
COL9A3-202ENST00000452372 GABBR1Q9UBS5 961 aa22.47■■□□□ 1.19
COL9A3-202ENST00000452372 MSRAQ9UJ68 235 aa22.47■■□□□ 1.19
COL9A3-202ENST00000452372 VAV3Q9UKW4 847 aa22.47■■□□□ 1.19
COL9A3-202ENST00000452372 TRPC6Q9Y210 931 aa22.47■■□□□ 1.19
COL9A3-202ENST00000452372 SLC4A7Q9Y6M7 1214 aa22.47■■□□□ 1.19
COL9A3-202ENST00000452372 TRANK1O15050 2925 aa22.46■■□□□ 1.19
COL9A3-202ENST00000452372 POTEB3A0JP26 581 aa22.46■■□□□ 1.19
COL9A3-202ENST00000452372 RBAK-RBAKDNI3L0D1 243 aa22.46■■□□□ 1.19
COL9A3-202ENST00000452372 ATP4AP20648 1035 aa22.46■■□□□ 1.19
COL9A3-202ENST00000452372 GRIK4Q16099 956 aa22.46■■□□□ 1.19
COL9A3-202ENST00000452372 CALCRLQ16602 461 aa22.46■■□□□ 1.19
COL9A3-202ENST00000452372 TRIM71Q2Q1W2 868 aaKnown RBP22.46■■□□□ 1.19
COL9A3-202ENST00000452372 MCTP1Q6DN14 999 aa22.46■■□□□ 1.19
COL9A3-202ENST00000452372 POTEBQ6S5H4 581 aa22.46■■□□□ 1.19
COL9A3-202ENST00000452372 HSCBQ8IWL3 235 aa22.46■■□□□ 1.19
COL9A3-202ENST00000452372 ATP8B4Q8TF62 1192 aa22.46■■□□□ 1.19
COL9A3-202ENST00000452372 NOL7Q9UMY1 257 aaKnown RBP22.46■■□□□ 1.19
COL9A3-202ENST00000452372 HBP1O60381 514 aa22.45■■□□□ 1.18
COL9A3-202ENST00000452372 PFKMP08237 780 aa22.45■■□□□ 1.18
COL9A3-202ENST00000452372 PDCP20941 246 aa22.45■■□□□ 1.18
COL9A3-202ENST00000452372 MCM7P33993 719 aa22.45■■□□□ 1.18
COL9A3-202ENST00000452372 TTC38Q5R3I4 469 aa22.45■■□□□ 1.18
COL9A3-202ENST00000452372 MARCH8Q5T0T0 291 aa22.45■■□□□ 1.18
COL9A3-202ENST00000452372 WNT8BQ93098 351 aa22.45■■□□□ 1.18
COL9A3-202ENST00000452372 MTMR9Q96QG7 549 aa22.45■■□□□ 1.18
COL9A3-202ENST00000452372 PCDHA12Q9UN75 941 aa22.45■■□□□ 1.18
COL9A3-202ENST00000452372 IGSF9BQ9UPX0 1349 aa22.45■■□□□ 1.18
COL9A3-202ENST00000452372 REV3LO60673 3130 aa22.45■■□□□ 1.18
COL9A3-202ENST00000452372 MBLAC1A4D2B0 266 aaPredicted RBP22.44■■□□□ 1.18
COL9A3-202ENST00000452372 SELPP16109 830 aa22.44■■□□□ 1.18
COL9A3-202ENST00000452372 RFC2P35250 354 aa22.44■■□□□ 1.18
COL9A3-202ENST00000452372 TOB1P50616 345 aaPredicted RBP22.44■■□□□ 1.18
COL9A3-202ENST00000452372 ZNF174Q15697 407 aa22.44■■□□□ 1.18
COL9A3-202ENST00000452372 BBXQ8WY36 941 aaPredicted RBP22.44■■□□□ 1.18
COL9A3-202ENST00000452372 TMEM60Q9H2L4 133 aa22.44■■□□□ 1.18
COL9A3-202ENST00000452372 PCDHA11Q9Y5I1 949 aa22.44■■□□□ 1.18
COL9A3-202ENST00000452372 TANC1Q9C0D5 1861 aa22.43■■□□□ 1.18
COL9A3-202ENST00000452372 EML1O00423 815 aa22.43■■□□□ 1.18
COL9A3-202ENST00000452372 CKBP12277 381 aa22.43■■□□□ 1.18
COL9A3-202ENST00000452372 ATP2A2P16615 1042 aaKnown RBP22.43■■□□□ 1.18
COL9A3-202ENST00000452372 IGBP1P78318 339 aa22.43■■□□□ 1.18
COL9A3-202ENST00000452372 SPIRE1Q08AE8 756 aa22.43■■□□□ 1.18
COL9A3-202ENST00000452372 CKAP2LQ8IYA6 745 aa22.43■■□□□ 1.18
COL9A3-202ENST00000452372 SLC28A3Q9HAS3 691 aa22.43■■□□□ 1.18
COL9A3-202ENST00000452372 PRDM6Q9NQX0 595 aa22.43■■□□□ 1.18
COL9A3-202ENST00000452372 TUBE1Q9UJT0 475 aa22.43■■□□□ 1.18
COL9A3-202ENST00000452372 COL1A2P08123 1366 aa22.42■■□□□ 1.18
COL9A3-202ENST00000452372 ZBBXA8MT70 800 aa22.42■■□□□ 1.18
COL9A3-202ENST00000452372 ZNF862O60290 1169 aa22.42■■□□□ 1.18
COL9A3-202ENST00000452372 TXKP42681 527 aa22.42■■□□□ 1.18
COL9A3-202ENST00000452372 EPHA7Q15375 998 aa22.42■■□□□ 1.18
COL9A3-202ENST00000452372 UGCGQ16739 394 aa22.42■■□□□ 1.18
COL9A3-202ENST00000452372 ZNF484Q5JVG2 852 aa22.42■■□□□ 1.18
COL9A3-202ENST00000452372 TAF2Q6P1X5 1199 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms