RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 ZNF215Q9UL58 517 aaPredicted RBP5.6□□□□□ -1.51
CCDC140-202ENST00000440903 GABRQQ9UN88 632 aa5.6□□□□□ -1.51
CCDC140-202ENST00000440903 PTPN22Q9Y2R2 807 aa5.6□□□□□ -1.51
CCDC140-202ENST00000440903 PLXNA1Q9UIW2 1896 aa5.6□□□□□ -1.51
CCDC140-202ENST00000440903 CYP3A7-CYP3A51PA0A087WV96 503 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 VWA3AA6NCI4 1184 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 SPATA31C2B4DYI2 1134 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 KBTBD13C9JR72 458 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 FAM86B1E9PN63 330 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 DDX39AO00148 427 aaKnown RBP5.59□□□□□ -1.51
CCDC140-202ENST00000440903 MEIS1O00470 390 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 BACH1O14867 736 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 SPTLC2O15270 562 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 SEPT4O43236 478 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 SLC26A4O43511 780 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 PPP6R2O75170 966 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 PSAPP07602 524 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 FAM86B2P0C5J1 330 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 CYBAP13498 195 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 CD46P15529 392 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 UBA1P22314 1058 aaKnown RBP5.59□□□□□ -1.51
CCDC140-202ENST00000440903 CYP3A7P24462 503 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 CTGFP29279 349 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 DDIT3P35638 169 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 LONP1P36776 959 aaKnown RBP5.59□□□□□ -1.51
CCDC140-202ENST00000440903 UBA7P41226 1012 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 ADCYAP1R1P41586 468 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 TXKP42681 527 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 MRPS9P82933 396 aaKnown RBP5.59□□□□□ -1.51
CCDC140-202ENST00000440903 ATP2C1P98194 919 aaPredicted RBP5.59□□□□□ -1.51
CCDC140-202ENST00000440903 SP4Q02446 784 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 DNM1Q05193 864 aaKnown RBP5.59□□□□□ -1.51
CCDC140-202ENST00000440903 NNTQ13423 1086 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 PKP1Q13835 747 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 CCL14Q16627 93 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 DUSP28Q4G0W2 176 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 ZNF746Q6NUN9 644 aaPredicted RBP5.59□□□□□ -1.51
CCDC140-202ENST00000440903 CCDC73Q6ZRK6 1079 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 MIER3Q7Z3K6 550 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 RNF180Q86T96 592 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 TLK2Q86UE8 772 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 KRI1Q8N9T8 703 aaKnown RBP5.59□□□□□ -1.51
CCDC140-202ENST00000440903 CRYGNQ8WXF5 182 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 SLC5A5Q92911 643 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 HLA-CQ95604 372 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 FGD4Q96M96 766 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 AK8Q96MA6 479 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 SPATA33Q96N06 139 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 MBOAT7Q96N66 472 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 PHOX2BQ99453 314 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 KATNAL1Q9BW62 490 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.59□□□□□ -1.51
CCDC140-202ENST00000440903 AGO4Q9HCK5 861 aaKnown RBP5.59□□□□□ -1.51
CCDC140-202ENST00000440903 KCNMB3Q9NPA1 279 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 XPNPEP3Q9NQH7 507 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 SLC9A2Q9UBY0 812 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 GJD2Q9UKL4 321 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 PCDHA12Q9UN75 941 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 PCDHB6Q9Y5E3 794 aa5.59□□□□□ -1.51
CCDC140-202ENST00000440903 MORC2Q9Y6X9 1032 aaPredicted RBP5.59□□□□□ -1.51
CCDC140-202ENST00000440903 ZSWIM8A7E2V4 1837 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 ASTN1O14525 1302 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 IGLV3-22A0A075B6J6 115 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 MSH4O15457 936 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 SLC37A4O43826 429 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 KPNA6O60684 536 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 CUTAO60888 179 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 DUSP11O75319 330 aaKnown RBP5.58□□□□□ -1.52
CCDC140-202ENST00000440903 FARP2O94887 1054 aaPredicted RBP5.58□□□□□ -1.52
CCDC140-202ENST00000440903 SNAI1O95863 264 aaPredicted RBP5.58□□□□□ -1.52
CCDC140-202ENST00000440903 C6orf222P0C671 652 aaPredicted RBP5.58□□□□□ -1.52
CCDC140-202ENST00000440903 ITGB5P18084 799 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 SLC26A2P50443 739 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 WDR4P57081 412 aaKnown RBP5.58□□□□□ -1.52
CCDC140-202ENST00000440903 USP46P62068 366 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 SH3BP2P78314 561 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 SLC39A14Q15043 492 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 CCDC144BQ3MJ40 725 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 EARS2Q5JPH6 523 aaKnown RBP5.58□□□□□ -1.52
CCDC140-202ENST00000440903 PTCRAQ6ISU1 281 aaPredicted RBP5.58□□□□□ -1.52
CCDC140-202ENST00000440903 FAM173BQ6P4H8 233 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 CKAP2LQ8IYA6 745 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 PCSK9Q8NBP7 692 aaKnown RBP5.58□□□□□ -1.52
CCDC140-202ENST00000440903 LINC00301Q8NCQ3 95 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 ARRDC4Q8NCT1 418 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 ETNPPLQ8TBG4 499 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 SNX29Q8TEQ0 813 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 SH3TC2Q8TF17 1288 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 GLG1Q92896 1179 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 FAM167AQ96KS9 214 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 NT5C3AQ9H0P0 336 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 TTC12Q9H892 705 aaPredicted RBP5.58□□□□□ -1.52
CCDC140-202ENST00000440903 DISC1Q9NRI5 854 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 FLRT1Q9NZU1 646 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 LRWD1Q9UFC0 647 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 DDX20Q9UHI6 824 aaKnown RBP5.58□□□□□ -1.52
CCDC140-202ENST00000440903 HOOK1Q9UJC3 728 aaKnown RBP5.58□□□□□ -1.52
CCDC140-202ENST00000440903 DDX41Q9UJV9 622 aaKnown RBP5.58□□□□□ -1.52
CCDC140-202ENST00000440903 Q9Y3F1 56 aa5.58□□□□□ -1.52
CCDC140-202ENST00000440903 MYH15Q9Y2K3 1946 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms