RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 CHORDC1Q9UHD1 332 aaPredicted RBP9.84□□□□□ -0.83
COPB1-202ENST00000439561 TBK1Q9UHD2 729 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 CCT8L1PA6NM43 557 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 PJA2O43164 708 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 DIAPH2O60879 1101 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 ACSL3O95573 720 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 GNA14O95837 355 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 PLA2G4BP0C869 781 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 STAT3P40763 770 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 USP11P51784 963 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 CALCOCO2Q13137 446 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 ACCSLQ4AC99 568 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 NAIF1Q69YI7 327 aaPredicted RBP9.84□□□□□ -0.83
COPB1-202ENST00000439561 LRIG3Q6UXM1 1119 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 ZNF571Q7Z3V5 609 aaPredicted RBP9.84□□□□□ -0.83
COPB1-202ENST00000439561 MIEF2Q96C03 454 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 CNOT10Q9H9A5 744 aaKnown RBP9.84□□□□□ -0.83
COPB1-202ENST00000439561 BLOC1S4Q9NUP1 217 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 DBR1Q9UK59 544 aaKnown RBP9.84□□□□□ -0.83
COPB1-202ENST00000439561 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.84□□□□□ -0.836e-6■■□□□ 13.9
COPB1-202ENST00000439561 C4AP0C0L4 1744 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 C4BP0C0L5 1744 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 ENO4A6NNW6 628 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 CCDC188H7C350 402 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 AFPP02771 609 aaKnown RBP9.84□□□□□ -0.83
COPB1-202ENST00000439561 HNRNPH3P31942 346 aaKnown RBP9.84□□□□□ -0.83
COPB1-202ENST00000439561 PCK1P35558 622 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 SARNPP82979 210 aaKnown RBP9.84□□□□□ -0.83
COPB1-202ENST00000439561 HGSNATQ68CP4 663 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 MAEAQ7L5Y9 396 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 ARMC9Q7Z3E5 817 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 YTHDF3Q7Z739 585 aaKnown RBP9.84□□□□□ -0.83
COPB1-202ENST00000439561 SLC4A9Q96Q91 983 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 MCM8Q9UJA3 840 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 A0A1W2PRG0 241 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 SPOPO43791 374 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 UCHL3P15374 230 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 CYP2J2P51589 502 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 PMS2P54278 862 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 ATP11AP98196 1134 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 DDR1Q08345 913 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 PLCB4Q15147 1175 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 UAP1Q16222 522 aaPredicted RBP9.83□□□□□ -0.84
COPB1-202ENST00000439561 CUL5Q93034 780 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 LZTS2Q9BRK4 669 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 OSGEPQ9NPF4 335 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 ASIC3Q9UHC3 531 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 NID2Q14112 1375 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 POTEFA5A3E0 1075 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 CHMP2AO43633 222 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 SHBGP04278 402 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 POTEIP0CG38 1075 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 NEFHP12036 1026 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 TNFRSF8P28908 595 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 GJC1P36383 396 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 SLC29A2Q14542 456 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 MESDQ14696 234 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 POTEGQ6S5H5 508 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 POTEEQ6S8J3 1075 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 LRRC55Q6ZSA7 311 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 VSIG1Q86XK7 387 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 SYCP3Q8IZU3 236 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 PNMA5Q96PV4 448 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 LBHD1Q9BQE6 289 aaPredicted RBP9.83□□□□□ -0.84
COPB1-202ENST00000439561 MMTAG2Q9BU76 263 aaKnown RBP9.83□□□□□ -0.84
COPB1-202ENST00000439561 FGFBP2Q9BYJ0 223 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 YIPF3Q9GZM5 350 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 NAGPAQ9UK23 515 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 FLT1P17948 1338 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 RASGRF2O14827 1237 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 RASSF9O75901 435 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 ATP6V1G2O95670 118 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 LDHCP07864 332 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 MYBL1P10243 752 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 IFI35P80217 286 aaPredicted RBP9.83□□□□□ -0.84
COPB1-202ENST00000439561 SNX1Q13596 522 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 GRIPAP1Q4V328 841 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 C12orf60Q5U649 245 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 TAOK1Q7L7X3 1001 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 TMC3Q7Z5M5 1100 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 PROM2Q8N271 834 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 CEP95Q96GE4 821 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 NAP1L3Q99457 506 aaPredicted RBP9.83□□□□□ -0.84
COPB1-202ENST00000439561 MYH13Q9UKX3 1938 aa9.83□□□□□ -0.84
COPB1-202ENST00000439561 F8VZ95 297 aa9.82□□□□□ -0.84
COPB1-202ENST00000439561 G3V3G9 751 aa9.82□□□□□ -0.84
COPB1-202ENST00000439561 PLCG2P16885 1265 aa9.82□□□□□ -0.84
COPB1-202ENST00000439561 RPL13P26373 211 aaKnown RBP9.82□□□□□ -0.84
COPB1-202ENST00000439561 STX2P32856 288 aa9.82□□□□□ -0.84
COPB1-202ENST00000439561 MRPL12P52815 198 aaKnown RBP9.82□□□□□ -0.84
COPB1-202ENST00000439561 GALCP54803 685 aa9.82□□□□□ -0.84
COPB1-202ENST00000439561 PSMD2Q13200 908 aa9.82□□□□□ -0.84
COPB1-202ENST00000439561 TRIP13Q15645 432 aaPredicted RBP9.82□□□□□ -0.84
COPB1-202ENST00000439561 PRR16Q569H4 304 aa9.82□□□□□ -0.84
COPB1-202ENST00000439561 DCAF8Q5TAQ9 597 aa9.82□□□□□ -0.84
COPB1-202ENST00000439561 SEL1L2Q5TEA6 688 aa9.82□□□□□ -0.84
COPB1-202ENST00000439561 C3orf67Q6ZVT6 689 aa9.82□□□□□ -0.84
COPB1-202ENST00000439561 INTS8Q75QN2 995 aaKnown RBP9.82□□□□□ -0.84
COPB1-202ENST00000439561 CD302Q8IX05 232 aa9.82□□□□□ -0.84
COPB1-202ENST00000439561 MREGQ8N565 214 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms