RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 CDCA3Q99618 268 aaPredicted RBP25.36■■□□□ 1.65
PTPRA-207ENST00000431048 LZTS2Q9BRK4 669 aa25.36■■□□□ 1.65
PTPRA-207ENST00000431048 CELF4Q9BZC1 486 aaKnown RBP25.36■■□□□ 1.65
PTPRA-207ENST00000431048 FAM49AQ9H0Q0 323 aaPredicted RBP25.36■■□□□ 1.65
PTPRA-207ENST00000431048 IGBP1P78318 339 aa25.35■■□□□ 1.65
PTPRA-207ENST00000431048 PAK2Q13177 524 aa25.35■■□□□ 1.65
PTPRA-207ENST00000431048 MTMR1Q13613 665 aa25.35■■□□□ 1.65
PTPRA-207ENST00000431048 RALYLQ86SE5 291 aaKnown RBP25.35■■□□□ 1.65
PTPRA-207ENST00000431048 ASIC4Q96FT7 647 aa25.35■■□□□ 1.65
PTPRA-207ENST00000431048 JADE2Q9NQC1 790 aa25.35■■□□□ 1.65
PTPRA-207ENST00000431048 CACNA1HO95180 2353 aa25.35■■□□□ 1.65
PTPRA-207ENST00000431048 KIF5BP33176 963 aa25.34■■□□□ 1.65
PTPRA-207ENST00000431048 PDE12Q6L8Q7 609 aaKnown RBP25.34■■□□□ 1.65
PTPRA-207ENST00000431048 TMX1Q9H3N1 280 aa25.34■■□□□ 1.65
PTPRA-207ENST00000431048 PSTPIP2Q9H939 334 aa25.34■■□□□ 1.65
PTPRA-207ENST00000431048 RNF216Q9NWF9 866 aaPredicted RBP25.34■■□□□ 1.65
PTPRA-207ENST00000431048 SEC63Q9UGP8 760 aaKnown RBP25.34■■□□□ 1.65
PTPRA-207ENST00000431048 LRFN2Q9ULH4 789 aa25.34■■□□□ 1.65
PTPRA-207ENST00000431048 PCDHB12Q9Y5F1 795 aa25.34■■□□□ 1.65
PTPRA-207ENST00000431048 SMIM35A0A1B0GVV1 85 aa25.33■■□□□ 1.65
PTPRA-207ENST00000431048 E7EWF7 191 aa25.33■■□□□ 1.65
PTPRA-207ENST00000431048 IGHDP01880 384 aa25.33■■□□□ 1.65
PTPRA-207ENST00000431048 SARSP49591 514 aaKnown RBP25.33■■□□□ 1.65
PTPRA-207ENST00000431048 TMEM184AQ6ZMB5 413 aa25.33■■□□□ 1.65
PTPRA-207ENST00000431048 PLPPR4Q7Z2D5 763 aa25.33■■□□□ 1.65
PTPRA-207ENST00000431048 CTCFLQ8NI51 663 aaPredicted RBP25.33■■□□□ 1.65
PTPRA-207ENST00000431048 ZBTB10Q96DT7 871 aa25.33■■□□□ 1.65
PTPRA-207ENST00000431048 RPGRIP1Q96KN7 1286 aa25.33■■□□□ 1.65
PTPRA-207ENST00000431048 AZI2Q9H6S1 392 aa25.33■■□□□ 1.65
PTPRA-207ENST00000431048 AAASQ9NRG9 546 aa25.33■■□□□ 1.65
PTPRA-207ENST00000431048 KIAA1671Q9BY89 1806 aa25.33■■□□□ 1.64
PTPRA-207ENST00000431048 DDAH1O94760 285 aa25.32■■□□□ 1.64
PTPRA-207ENST00000431048 AVPR2P30518 371 aa25.32■■□□□ 1.64
PTPRA-207ENST00000431048 GNAQP50148 359 aa25.32■■□□□ 1.64
PTPRA-207ENST00000431048 GATMP50440 423 aa25.32■■□□□ 1.64
PTPRA-207ENST00000431048 NUBP1P53384 320 aa25.32■■□□□ 1.64
PTPRA-207ENST00000431048 DUSP6Q16828 381 aa25.32■■□□□ 1.64
PTPRA-207ENST00000431048 MICAL1Q8TDZ2 1067 aa25.32■■□□□ 1.64
PTPRA-207ENST00000431048 TLR9Q9NR96 1032 aa25.32■■□□□ 1.64
PTPRA-207ENST00000431048 PCDHB7Q9Y5E2 793 aa25.32■■□□□ 1.64
PTPRA-207ENST00000431048 PCDHGC5Q9Y5F6 944 aa25.32■■□□□ 1.64
PTPRA-207ENST00000431048 ZFHX2Q9C0A1 2572 aaPredicted RBP25.31■■□□□ 1.64
PTPRA-207ENST00000431048 ANTXR2P58335 489 aa25.31■■□□□ 1.64
PTPRA-207ENST00000431048 PTH1RQ03431 593 aa25.31■■□□□ 1.64
PTPRA-207ENST00000431048 PLCB4Q15147 1175 aa25.31■■□□□ 1.64
PTPRA-207ENST00000431048 NEK1Q96PY6 1258 aa25.31■■□□□ 1.64
PTPRA-207ENST00000431048 MTA3Q9BTC8 594 aa25.31■■□□□ 1.64
PTPRA-207ENST00000431048 JPH1Q9HDC5 661 aaPredicted RBP25.31■■□□□ 1.64
PTPRA-207ENST00000431048 SLC9A2Q9UBY0 812 aa25.31■■□□□ 1.64
PTPRA-207ENST00000431048 PER2O15055 1255 aa25.3■■□□□ 1.64
PTPRA-207ENST00000431048 PPFIA3O75145 1194 aa25.3■■□□□ 1.64
PTPRA-207ENST00000431048 KRT76Q01546 638 aa25.3■■□□□ 1.64
PTPRA-207ENST00000431048 TMEM62Q0P6H9 643 aa25.3■■□□□ 1.64
PTPRA-207ENST00000431048 KCNC3Q14003 757 aa25.3■■□□□ 1.64
PTPRA-207ENST00000431048 PTPN21Q16825 1174 aa25.3■■□□□ 1.64
PTPRA-207ENST00000431048 ZNF654Q8IZM8 581 aa25.3■■□□□ 1.64
PTPRA-207ENST00000431048 VN1R2Q8NFZ6 395 aa25.3■■□□□ 1.64
PTPRA-207ENST00000431048 S1PR5Q9H228 398 aa25.3■■□□□ 1.64
PTPRA-207ENST00000431048 PKD2L1Q9P0L9 805 aa25.3■■□□□ 1.64
PTPRA-207ENST00000431048 TRPC6Q9Y210 931 aa25.3■■□□□ 1.64
PTPRA-207ENST00000431048 TAF6LQ9Y6J9 622 aa25.3■■□□□ 1.64
PTPRA-207ENST00000431048 CFAP54Q96N23 3096 aa25.3■■□□□ 1.64
PTPRA-207ENST00000431048 FSCN2O14926 492 aa25.29■■□□□ 1.64
PTPRA-207ENST00000431048 VCPP55072 806 aaKnown RBP25.29■■□□□ 1.64
PTPRA-207ENST00000431048 MB21D2Q8IYB1 491 aaPredicted RBP25.29■■□□□ 1.64
PTPRA-207ENST00000431048 SRBD1Q8N5C6 995 aaKnown RBP25.29■■□□□ 1.64
PTPRA-207ENST00000431048 RASGRP4Q8TDF6 673 aa25.29■■□□□ 1.64
PTPRA-207ENST00000431048 RUFY2Q8WXA3 655 aa25.29■■□□□ 1.64
PTPRA-207ENST00000431048 LY9Q9HBG7 655 aa25.29■■□□□ 1.64
PTPRA-207ENST00000431048 ERVK-5Q9HDB9 667 aa25.29■■□□□ 1.64
PTPRA-207ENST00000431048 RGS18Q9NS28 235 aa25.29■■□□□ 1.64
PTPRA-207ENST00000431048 C1orf112Q9NSG2 853 aa25.29■■□□□ 1.64
PTPRA-207ENST00000431048 KMT2EQ8IZD2 1858 aa25.29■■□□□ 1.64
PTPRA-207ENST00000431048 NFASCO94856 1347 aa25.29■■□□□ 1.64
PTPRA-207ENST00000431048 SPDYE3A6NKU9 549 aa25.28■■□□□ 1.64
PTPRA-207ENST00000431048 GFRA3O60609 400 aa25.28■■□□□ 1.64
PTPRA-207ENST00000431048 FGF18O76093 207 aa25.28■■□□□ 1.64
PTPRA-207ENST00000431048 STAT5BP51692 787 aa25.28■■□□□ 1.64
PTPRA-207ENST00000431048 ERVFC1P60507 584 aa25.28■■□□□ 1.64
PTPRA-207ENST00000431048 ODR4Q5SWX8 454 aa25.28■■□□□ 1.64
PTPRA-207ENST00000431048 MTHFD1LQ6UB35 978 aa25.28■■□□□ 1.64
PTPRA-207ENST00000431048 TRAPPC12Q8WVT3 735 aa25.28■■□□□ 1.64
PTPRA-207ENST00000431048 KCNH7Q9NS40 1196 aa25.28■■□□□ 1.64
PTPRA-207ENST00000431048 PCDHA6Q9UN73 950 aa25.28■■□□□ 1.64
PTPRA-207ENST00000431048 LZTS1Q9Y250 596 aa25.28■■□□□ 1.64
PTPRA-207ENST00000431048 PCDHA8Q9Y5H6 950 aa25.28■■□□□ 1.64
PTPRA-207ENST00000431048 ATG7O95352 703 aa25.27■■□□□ 1.64
PTPRA-207ENST00000431048 SRGAP2BP0DMP2 458 aa25.27■■□□□ 1.64
PTPRA-207ENST00000431048 SLC26A2P50443 739 aa25.27■■□□□ 1.64
PTPRA-207ENST00000431048 NFX1Q12986 1120 aaKnown RBP25.27■■□□□ 1.64
PTPRA-207ENST00000431048 SPOUT1Q5T280 376 aaKnown RBP25.27■■□□□ 1.64
PTPRA-207ENST00000431048 SLC24A5Q71RS6 500 aa25.27■■□□□ 1.64
PTPRA-207ENST00000431048 TMTC2Q8N394 836 aa25.27■■□□□ 1.64
PTPRA-207ENST00000431048 MXRA8Q9BRK3 442 aa25.27■■□□□ 1.64
PTPRA-207ENST00000431048 PLXNA4Q9HCM2 1894 aa25.27■■□□□ 1.64
PTPRA-207ENST00000431048 TBKBP1A7MCY6 615 aa25.26■■□□□ 1.63
PTPRA-207ENST00000431048 C9IYK1 514 aa25.26■■□□□ 1.63
PTPRA-207ENST00000431048 MGEA5O60502 916 aa25.26■■□□□ 1.63
PTPRA-207ENST00000431048 ACTR2P61160 394 aa25.26■■□□□ 1.63
PTPRA-207ENST00000431048 FAM189BP81408 668 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms