RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 NR3C2P08235 984 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 APBA1Q02410 837 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 FIGNQ5HY92 759 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 ZNF569Q5MCW4 686 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 ODR4Q5SWX8 454 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 PPP4R3CPQ6ZMV5 832 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 RRAGAQ7L523 313 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 NIPA1Q7RTP0 329 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 SULF1Q8IWU6 871 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 DCPSQ96C86 337 aaKnown RBP11.47□□□□□ -0.57
HDAC9-210ENST00000428307 ZSWIM4Q9H7M6 989 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 NHEJ1Q9H9Q4 299 aaPredicted RBP11.47□□□□□ -0.57
HDAC9-210ENST00000428307 OLFML3Q9NRN5 406 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 REXO2Q9Y3B8 237 aaKnown RBP11.47□□□□□ -0.57
HDAC9-210ENST00000428307 ATAD5Q96QE3 1844 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 SSC5DA1L4H1 1573 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 PDXKO00764 312 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 AKAP3O75969 853 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 PLEKP08567 350 aaPredicted RBP11.47□□□□□ -0.57
HDAC9-210ENST00000428307 GAP43P17677 238 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 MEA1Q16626 185 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 UTP14CQ5TAP6 766 aaKnown RBP11.47□□□□□ -0.57
HDAC9-210ENST00000428307 PADI6Q6TGC4 694 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 CACNA2D4Q7Z3S7 1137 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 FAM178BQ8IXR5 827 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 TEX13BQ9BXU2 312 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 NLRC4Q9NPP4 1024 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 ADARB2Q9NS39 739 aaKnown RBP11.47□□□□□ -0.57
HDAC9-210ENST00000428307 TBC1D22BQ9NU19 505 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 HOXC10Q9NYD6 342 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 TRIM10Q9UDY6 481 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 TCEAL9Q9UHQ7 104 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 PNMA2Q9UL42 364 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 ADAMTS5Q9UNA0 930 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 A0A1W2PQJ5 194 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 SPDYE16A6NNV3 312 aaPredicted RBP11.46□□□□□ -0.57
HDAC9-210ENST00000428307 CALUO43852 315 aaPredicted RBP11.46□□□□□ -0.57
HDAC9-210ENST00000428307 SORBS3O60504 671 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 HIP1RO75146 1068 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 NR3C1P04150 777 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 MUTP22033 750 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 QARSP47897 775 aaKnown RBP11.46□□□□□ -0.57
HDAC9-210ENST00000428307 CASP4P49662 377 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 MAP3K9P80192 1104 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 CYP27A1Q02318 531 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 KCNH2Q12809 1159 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 TREML2Q5T2D2 321 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 VSIG10LQ86VR7 867 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 NEK11Q8NG66 645 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 ARID3AQ99856 593 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 SYT17Q9BSW7 474 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 ARMCX3Q9UH62 379 aaPredicted RBP11.46□□□□□ -0.57
HDAC9-210ENST00000428307 GUCA1BQ9UMX6 200 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 PLAGL2Q9UPG8 496 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 PCDHB13Q9Y5F0 798 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 SNCAIPQ9Y6H5 919 aa11.46□□□□□ -0.57
HDAC9-210ENST00000428307 ASTN1O14525 1302 aa11.46□□□□□ -0.58
HDAC9-210ENST00000428307 FRMPD4Q14CM0 1322 aa11.46□□□□□ -0.58
HDAC9-210ENST00000428307 LRRC53A6NM62 1247 aa11.46□□□□□ -0.58
HDAC9-210ENST00000428307 TGFB1I1O43294 461 aa11.46□□□□□ -0.58
HDAC9-210ENST00000428307 CCNE2O96020 404 aa11.46□□□□□ -0.58
HDAC9-210ENST00000428307 ARHGAP25P42331 645 aa11.46□□□□□ -0.58
HDAC9-210ENST00000428307 SP4Q02446 784 aa11.46□□□□□ -0.58
HDAC9-210ENST00000428307 UGCGQ16739 394 aa11.46□□□□□ -0.58
HDAC9-210ENST00000428307 TCERG1LQ5VWI1 586 aa11.46□□□□□ -0.58
HDAC9-210ENST00000428307 ZNF720Q7Z2F6 126 aa11.46□□□□□ -0.58
HDAC9-210ENST00000428307 SAMD3Q8N6K7 520 aa11.46□□□□□ -0.58
HDAC9-210ENST00000428307 ERO1AQ96HE7 468 aa11.46□□□□□ -0.58
HDAC9-210ENST00000428307 FIZ1Q96SL8 496 aa11.46□□□□□ -0.58
HDAC9-210ENST00000428307 A1CFQ9NQ94 594 aaKnown RBP11.46□□□□□ -0.58
HDAC9-210ENST00000428307 TYW1Q9NV66 732 aaKnown RBP11.46□□□□□ -0.58
HDAC9-210ENST00000428307 PPP1R12BO60237 982 aaPredicted RBP11.45□□□□□ -0.58
HDAC9-210ENST00000428307 YBX3P16989 372 aaKnown RBP eCLIP11.45□□□□□ -0.58
HDAC9-210ENST00000428307 YWHABP31946 246 aaKnown RBP11.45□□□□□ -0.58
HDAC9-210ENST00000428307 MARSP56192 900 aaKnown RBP11.45□□□□□ -0.58
HDAC9-210ENST00000428307 HERVK_113P62684 666 aa11.45□□□□□ -0.58
HDAC9-210ENST00000428307 BMT2Q1RMZ1 405 aa11.45□□□□□ -0.58
HDAC9-210ENST00000428307 ERCC6LQ2NKX8 1250 aa11.45□□□□□ -0.58
HDAC9-210ENST00000428307 DCAF17Q5H9S7 520 aaPredicted RBP11.45□□□□□ -0.58
HDAC9-210ENST00000428307 NOL9Q5SY16 702 aaKnown RBP11.45□□□□□ -0.58
HDAC9-210ENST00000428307 C9orf131Q5VYM1 1079 aa11.45□□□□□ -0.58
HDAC9-210ENST00000428307 MOB2Q70IA6 237 aa11.45□□□□□ -0.58
HDAC9-210ENST00000428307 ZC3H3Q8IXZ2 948 aaKnown RBP11.45□□□□□ -0.58
HDAC9-210ENST00000428307 DAW1Q8N136 415 aa11.45□□□□□ -0.58
HDAC9-210ENST00000428307 NSUN6Q8TEA1 469 aaKnown RBP11.45□□□□□ -0.58
HDAC9-210ENST00000428307 CCDC42Q96M95 316 aa11.45□□□□□ -0.58
HDAC9-210ENST00000428307 CARD6Q9BX69 1037 aa11.45□□□□□ -0.58
HDAC9-210ENST00000428307 CYP39A1Q9NYL5 469 aa11.45□□□□□ -0.58
HDAC9-210ENST00000428307 USO1O60763 962 aaKnown RBP11.45□□□□□ -0.58
HDAC9-210ENST00000428307 GUCY2CP25092 1073 aa11.45□□□□□ -0.58
HDAC9-210ENST00000428307 RPL13P26373 211 aaKnown RBP11.45□□□□□ -0.58
HDAC9-210ENST00000428307 CCND2P30279 289 aa11.45□□□□□ -0.58
HDAC9-210ENST00000428307 CYLC1P35663 651 aaPredicted RBP11.45□□□□□ -0.58
HDAC9-210ENST00000428307 RARRES1P49788 294 aa11.45□□□□□ -0.58
HDAC9-210ENST00000428307 ZNF131P52739 623 aa11.45□□□□□ -0.58
HDAC9-210ENST00000428307 OAZ1P54368 228 aa11.45□□□□□ -0.58
HDAC9-210ENST00000428307 POLR2FP61218 127 aaKnown RBP11.45□□□□□ -0.58
HDAC9-210ENST00000428307 ELF2Q15723 593 aa11.45□□□□□ -0.58
HDAC9-210ENST00000428307 NLRX1Q86UT6 975 aa11.45□□□□□ -0.58
HDAC9-210ENST00000428307 SLC35F6Q8N357 371 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms