RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 BRMS1Q9HCU9 246 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 KCNH7Q9NS40 1196 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 TELO2Q9Y4R8 837 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 MRVI1Q9Y6F6 885 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 SYNRGQ9UMZ2 1314 aa8.42□□□□□ -1.06
LINC01049-201ENST00000426840 DHX15O43143 795 aaKnown RBP8.41□□□□□ -1.06
LINC01049-201ENST00000426840 TDP2O95551 362 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 GGPS1O95749 300 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 C6orf222P0C671 652 aaPredicted RBP8.41□□□□□ -1.06
LINC01049-201ENST00000426840 COL6A1P12109 1028 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 SYT1P21579 422 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 UBA1P22314 1058 aaKnown RBP8.41□□□□□ -1.06
LINC01049-201ENST00000426840 RGS19P49795 217 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 MTMR1Q13613 665 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 LAMC2Q13753 1193 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 NEDD9Q14511 834 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 KCNA10Q16322 511 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 LETM2Q2VYF4 491 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 HSDL1Q3SXM5 330 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 Q4G0T1 1027 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 PRR16Q569H4 304 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 GNASQ5JWF2 1037 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 PPP4R3AQ6IN85 833 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 NEK8Q86SG6 692 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 RNF180Q86T96 592 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 OR6J1Q8NGC5 347 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 DIS3LQ8TF46 1054 aaKnown RBP8.41□□□□□ -1.06
LINC01049-201ENST00000426840 AFG1LQ8WV93 481 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 CDHR1Q96JP9 859 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 ARHGAP9Q9BRR9 750 aa8.41□□□□□ -1.06
LINC01049-201ENST00000426840 TSEN34Q9BSV6 310 aaKnown RBP8.41□□□□□ -1.06
LINC01049-201ENST00000426840 AGO4Q9HCK5 861 aaKnown RBP8.41□□□□□ -1.06
LINC01049-201ENST00000426840 FRMPD3Q5JV73 1810 aa8.4□□□□□ -1.06
LINC01049-201ENST00000426840 NFASCO94856 1347 aa8.4□□□□□ -1.06
LINC01049-201ENST00000426840 H3BQV1 296 aa8.4□□□□□ -1.06
LINC01049-201ENST00000426840 DNM1LO00429 736 aa8.4□□□□□ -1.06
LINC01049-201ENST00000426840 MSH4O15457 936 aa8.4□□□□□ -1.06
LINC01049-201ENST00000426840 SORBS3O60504 671 aa8.4□□□□□ -1.06
LINC01049-201ENST00000426840 FARP2O94887 1054 aaPredicted RBP8.4□□□□□ -1.06
LINC01049-201ENST00000426840 ASGR1P07306 291 aa8.4□□□□□ -1.06
LINC01049-201ENST00000426840 PDCP20941 246 aa8.4□□□□□ -1.06
LINC01049-201ENST00000426840 TOB1P50616 345 aaPredicted RBP8.4□□□□□ -1.06
LINC01049-201ENST00000426840 ACLYP53396 1101 aa8.4□□□□□ -1.06
LINC01049-201ENST00000426840 ITGB3BPQ13352 177 aaPredicted RBP8.4□□□□□ -1.06
LINC01049-201ENST00000426840 FSCN1Q16658 493 aaKnown RBP8.4□□□□□ -1.06
LINC01049-201ENST00000426840 METTL7BQ6UX53 244 aa8.4□□□□□ -1.06
LINC01049-201ENST00000426840 CYFIP1Q7L576 1253 aa8.4□□□□□ -1.06
LINC01049-201ENST00000426840 NOSTRINQ8IVI9 506 aa8.4□□□□□ -1.06
LINC01049-201ENST00000426840 GIMAP8Q8ND71 665 aaPredicted RBP8.4□□□□□ -1.06
LINC01049-201ENST00000426840 PAWRQ96IZ0 340 aaKnown RBP8.4□□□□□ -1.06
LINC01049-201ENST00000426840 UIMC1Q96RL1 719 aa8.4□□□□□ -1.06
LINC01049-201ENST00000426840 MLXIPQ9HAP2 919 aa8.4□□□□□ -1.06
LINC01049-201ENST00000426840 SPC25Q9HBM1 224 aa8.4□□□□□ -1.06
LINC01049-201ENST00000426840 PHF24Q9UPV7 400 aa8.4□□□□□ -1.06
LINC01049-201ENST00000426840 MTMR6Q9Y217 621 aa8.4□□□□□ -1.06
LINC01049-201ENST00000426840 DOCK5Q9H7D0 1870 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 GSTTP1A0A1W2PQM5 241 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 KBTBD13C9JR72 458 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 IPO5O00410 1097 aaKnown RBP8.39□□□□□ -1.07
LINC01049-201ENST00000426840 SLC37A4O43826 429 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 CCNT1O60563 726 aaKnown RBP8.39□□□□□ -1.07
LINC01049-201ENST00000426840 PPFIA4O75335 1185 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 ATG7O95352 703 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 MMP3P08254 477 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 HOXD8P13378 290 aaPredicted RBP8.39□□□□□ -1.07
LINC01049-201ENST00000426840 GCFC2P16383 781 aaKnown RBP8.39□□□□□ -1.07
LINC01049-201ENST00000426840 CPT1AP50416 773 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 SETQ01105 290 aaPredicted RBP8.39□□□□□ -1.07
LINC01049-201ENST00000426840 BECN1Q14457 450 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 MCTP1Q6DN14 999 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 CXCL17Q6UXB2 119 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 NECAB2Q7Z6G3 386 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 SH3RF1Q7Z6J0 888 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 C4orf32Q8N8J7 132 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 PCSK9Q8NBP7 692 aaKnown RBP8.39□□□□□ -1.07
LINC01049-201ENST00000426840 PPTC7Q8NI37 304 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 ETNPPLQ8TBG4 499 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 HAS1Q92839 578 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 SLC5A5Q92911 643 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 GJA10Q969M2 543 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 FERMT2Q96AC1 680 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 SPATA33Q96N06 139 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 GPR20Q99678 358 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 NAP1L4Q99733 375 aaKnown RBP8.39□□□□□ -1.07
LINC01049-201ENST00000426840 ZNF577Q9BSK1 485 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 SENP6Q9GZR1 1112 aaPredicted RBP8.39□□□□□ -1.07
LINC01049-201ENST00000426840 KCNMB3Q9NPA1 279 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 AAASQ9NRG9 546 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 TBC1D22BQ9NU19 505 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 DDX25Q9UHL0 483 aaKnown RBP8.39□□□□□ -1.07
LINC01049-201ENST00000426840 CENPFP49454 3210 aa8.39□□□□□ -1.07
LINC01049-201ENST00000426840 GRIN2DO15399 1336 aa8.38□□□□□ -1.07
LINC01049-201ENST00000426840 TBX3O15119 743 aa8.38□□□□□ -1.07
LINC01049-201ENST00000426840 AXIN1O15169 862 aa8.38□□□□□ -1.07
LINC01049-201ENST00000426840 STX6O43752 255 aa8.38□□□□□ -1.07
LINC01049-201ENST00000426840 ZEB2O60315 1214 aa8.38□□□□□ -1.07
LINC01049-201ENST00000426840 KPNA6O60684 536 aa8.38□□□□□ -1.07
LINC01049-201ENST00000426840 PSMD10O75832 226 aa8.38□□□□□ -1.07
LINC01049-201ENST00000426840 CCNE2O96020 404 aa8.38□□□□□ -1.07
LINC01049-201ENST00000426840 HSP90AA1P07900 732 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms