RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 SPIRE2Q8WWL2 714 aa10.94□□□□□ -0.66
LINC01090-201ENST00000415357 HLA-CQ95604 372 aa10.94□□□□□ -0.66
LINC01090-201ENST00000415357 C17orf102A2RUQ5 167 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 ZBBXA8MT70 800 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 DDX39AO00148 427 aaKnown RBP10.93□□□□□ -0.66
LINC01090-201ENST00000415357 MEIS1O00470 390 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 TREHO43280 583 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 HOXA2O43364 376 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 PFKFB2O60825 505 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 DEXIO95424 95 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 CKBP12277 381 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 GNA11P29992 359 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 NLRP5P59047 1200 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 SMAD3P84022 425 aaKnown RBP10.93□□□□□ -0.66
LINC01090-201ENST00000415357 PTK7Q13308 1070 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 TRIM71Q2Q1W2 868 aaKnown RBP10.93□□□□□ -0.66
LINC01090-201ENST00000415357 C8orf34Q49A92 452 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 LRRC8DQ7L1W4 858 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 PLA2G4DQ86XP0 818 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 TEX2Q8IWB9 1127 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 NECAB1Q8N987 351 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 RETREG2Q8NC44 543 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 GIMAP8Q8ND71 665 aaPredicted RBP10.93□□□□□ -0.66
LINC01090-201ENST00000415357 CAGE1Q8TC20 777 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 CRYGNQ8WXF5 182 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 HERVK_113Q902F9 699 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 IL17RAQ96F46 866 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 SLKQ9H2G2 1235 aaPredicted RBP10.93□□□□□ -0.66
LINC01090-201ENST00000415357 RNPEPQ9H4A4 650 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 IL21Q9HBE4 155 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 AGO4Q9HCK5 861 aaKnown RBP10.93□□□□□ -0.66
LINC01090-201ENST00000415357 JPH1Q9HDC5 661 aaPredicted RBP10.93□□□□□ -0.66
LINC01090-201ENST00000415357 SETD4Q9NVD3 440 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 MTMR10Q9NXD2 777 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 PLA2G2EQ9NZK7 142 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 SLC9A2Q9UBY0 812 aa10.93□□□□□ -0.66
LINC01090-201ENST00000415357 TRIP12Q14669 1992 aaPredicted RBP10.92□□□□□ -0.66
LINC01090-201ENST00000415357 CHD9Q3L8U1 2897 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 EYSQ5T1H1 3165 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 IGLV3-22A0A075B6J6 115 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.92□□□□□ -0.66
LINC01090-201ENST00000415357 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.92□□□□□ -0.66
LINC01090-201ENST00000415357 MAFGO15525 162 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 EDIL3O43854 480 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 CTDNEP1O95476 244 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 SELPP16109 830 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 HOXC8P31273 242 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 NEK4P51957 841 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 USP46P62068 366 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 GUCA2AQ02747 115 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 GPNMBQ14956 572 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 ME3Q16798 604 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 ZNF618Q5T7W0 954 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 ZNF697Q5TEC3 545 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 CPLX2Q6PUV4 134 aaKnown RBP10.92□□□□□ -0.66
LINC01090-201ENST00000415357 TRAF7Q6Q0C0 670 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 RPUSD2Q8IZ73 545 aaKnown RBP10.92□□□□□ -0.66
LINC01090-201ENST00000415357 CCDC155Q8N6L0 562 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 BICD2Q8TD16 824 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 AFAP1L1Q8TED9 768 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 LMBR1Q8WVP7 490 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 SEPT1Q8WYJ6 367 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 ZNF516Q92618 1163 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 ATP6V0A1Q93050 837 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 PCYT2Q99447 389 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 SDF4Q9BRK5 362 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 FTOQ9C0B1 505 aaKnown RBP eCLIP10.92□□□□□ -0.66
LINC01090-201ENST00000415357 TTYH1Q9H313 450 aaPredicted RBP10.92□□□□□ -0.66
LINC01090-201ENST00000415357 GJB4Q9NTQ9 266 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 ZNF215Q9UL58 517 aaPredicted RBP10.92□□□□□ -0.66
LINC01090-201ENST00000415357 KCNJ14Q9UNX9 436 aa10.92□□□□□ -0.66
LINC01090-201ENST00000415357 NFASCO94856 1347 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 NBNO60934 754 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 CCNE2O96020 404 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 CYP3A4P08684 503 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 RFC2P35250 354 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 THPOP40225 353 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 ACTR2P61160 394 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 KCNC4Q03721 635 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 RBL2Q08999 1139 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 MBTPS1Q14703 1052 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 NPY5RQ15761 445 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 TCTN1Q2MV58 587 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 NIPA1Q7RTP0 329 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 SERINC5Q86VE9 423 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 GLG1Q92896 1179 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 ZBTB10Q96DT7 871 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 GUCD1Q96NT3 240 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 PBX4Q9BYU1 374 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 MTIF3Q9H2K0 278 aaKnown RBP10.91□□□□□ -0.66
LINC01090-201ENST00000415357 SH3GLB2Q9NR46 395 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 PCDHA4Q9UN74 947 aa10.91□□□□□ -0.66
LINC01090-201ENST00000415357 EMSYQ7Z589 1322 aa10.9□□□□□ -0.66
LINC01090-201ENST00000415357 STK36Q9NRP7 1315 aa10.9□□□□□ -0.66
LINC01090-201ENST00000415357 TET1Q8NFU7 2136 aa10.9□□□□□ -0.66
LINC01090-201ENST00000415357 GBF1Q92538 1859 aa10.9□□□□□ -0.66
LINC01090-201ENST00000415357 TLL1O43897 1013 aa10.9□□□□□ -0.66
LINC01090-201ENST00000415357 NR1I2O75469 434 aa10.9□□□□□ -0.66
LINC01090-201ENST00000415357 LGR5O75473 907 aa10.9□□□□□ -0.66
LINC01090-201ENST00000415357 CDKL5O76039 1030 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms