RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 DPYDQ12882 1025 aa19.18■□□□□ 0.66
PTPRC-206ENST00000413409 FAM178BQ8IXR5 827 aa19.18■□□□□ 0.66
PTPRC-206ENST00000413409 RPUSD2Q8IZ73 545 aaKnown RBP19.18■□□□□ 0.66
PTPRC-206ENST00000413409 GJD3Q8N144 294 aa19.18■□□□□ 0.66
PTPRC-206ENST00000413409 GMCL1Q96IK5 515 aa19.18■□□□□ 0.66
PTPRC-206ENST00000413409 GSDMAQ96QA5 445 aa19.18■□□□□ 0.66
PTPRC-206ENST00000413409 CCSER1Q9C0I3 900 aa19.18■□□□□ 0.66
PTPRC-206ENST00000413409 MAGEF1Q9HAY2 307 aa19.18■□□□□ 0.66
PTPRC-206ENST00000413409 SPC25Q9HBM1 224 aa19.18■□□□□ 0.66
PTPRC-206ENST00000413409 VAT1LQ9HCJ6 419 aa19.18■□□□□ 0.66
PTPRC-206ENST00000413409 RIPK3Q9Y572 518 aa19.18■□□□□ 0.66
PTPRC-206ENST00000413409 ASTN1O14525 1302 aa19.18■□□□□ 0.66
PTPRC-206ENST00000413409 B4GALT4O60513 344 aa19.17■□□□□ 0.66
PTPRC-206ENST00000413409 PTGS1P23219 599 aa19.17■□□□□ 0.66
PTPRC-206ENST00000413409 ERCC5P28715 1186 aaPredicted RBP19.17■□□□□ 0.66
PTPRC-206ENST00000413409 SLFN13Q68D06 897 aa19.17■□□□□ 0.66
PTPRC-206ENST00000413409 CCDC186Q7Z3E2 898 aa19.17■□□□□ 0.66
PTPRC-206ENST00000413409 GRAMD1CQ8IYS0 662 aa19.17■□□□□ 0.66
PTPRC-206ENST00000413409 KATNBL1Q9H079 304 aa19.17■□□□□ 0.66
PTPRC-206ENST00000413409 TMEM60Q9H2L4 133 aa19.17■□□□□ 0.66
PTPRC-206ENST00000413409 SPTLC3Q9NUV7 552 aa19.17■□□□□ 0.66
PTPRC-206ENST00000413409 IMPACTQ9P2X3 320 aa19.17■□□□□ 0.66
PTPRC-206ENST00000413409 PPP1R9AQ9ULJ8 1098 aa19.17■□□□□ 0.66
PTPRC-206ENST00000413409 TRIOO75962 3097 aa19.16■□□□□ 0.66
PTPRC-206ENST00000413409 CBFA2T2O43439 604 aa19.16■□□□□ 0.66
PTPRC-206ENST00000413409 SEMA3FQ13275 785 aa19.16■□□□□ 0.66
PTPRC-206ENST00000413409 ITGA7Q13683 1181 aa19.16■□□□□ 0.66
PTPRC-206ENST00000413409 ENOX1Q8TC92 643 aaKnown RBP19.16■□□□□ 0.66
PTPRC-206ENST00000413409 HSD3B7Q9H2F3 369 aa19.16■□□□□ 0.66
PTPRC-206ENST00000413409 CUEDC2Q9H467 287 aa19.16■□□□□ 0.66
PTPRC-206ENST00000413409 ARHGEF10LQ9HCE6 1279 aa19.16■□□□□ 0.66
PTPRC-206ENST00000413409 DISC1Q9NRI5 854 aa19.16■□□□□ 0.66
PTPRC-206ENST00000413409 MCM3APO60318 1980 aa19.16■□□□□ 0.66
PTPRC-206ENST00000413409 PPP1R11O60927 126 aaPredicted RBP19.15■□□□□ 0.66
PTPRC-206ENST00000413409 MYL1P05976 194 aa19.15■□□□□ 0.66
PTPRC-206ENST00000413409 SLC1A4P43007 532 aa19.15■□□□□ 0.66
PTPRC-206ENST00000413409 CLK2P49760 499 aaKnown RBP19.15■□□□□ 0.66
PTPRC-206ENST00000413409 GSDMDP57764 484 aa19.15■□□□□ 0.66
PTPRC-206ENST00000413409 ISM2Q6H9L7 571 aa19.15■□□□□ 0.66
PTPRC-206ENST00000413409 TTBK2Q6IQ55 1244 aa19.15■□□□□ 0.66
PTPRC-206ENST00000413409 ZNF467Q7Z7K2 595 aaPredicted RBP19.15■□□□□ 0.66
PTPRC-206ENST00000413409 TBCKQ8TEA7 893 aa19.15■□□□□ 0.66
PTPRC-206ENST00000413409 CUL5Q93034 780 aa19.15■□□□□ 0.66
PTPRC-206ENST00000413409 NAP1L4Q99733 375 aaKnown RBP19.15■□□□□ 0.66
PTPRC-206ENST00000413409 ABHD16BQ9H3Z7 469 aa19.15■□□□□ 0.66
PTPRC-206ENST00000413409 CFAP54Q96N23 3096 aa19.14■□□□□ 0.66
PTPRC-206ENST00000413409 CACNA1AO00555 2505 aa19.14■□□□□ 0.65
PTPRC-206ENST00000413409 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.14■□□□□ 0.65
PTPRC-206ENST00000413409 COPB2P35606 906 aa19.14■□□□□ 0.65
PTPRC-206ENST00000413409 MRPL12P52815 198 aaKnown RBP19.14■□□□□ 0.65
PTPRC-206ENST00000413409 FANCCQ00597 558 aa19.14■□□□□ 0.65
PTPRC-206ENST00000413409 LETM2Q2VYF4 491 aa19.14■□□□□ 0.65
PTPRC-206ENST00000413409 MCTP2Q6DN12 878 aa19.14■□□□□ 0.65
PTPRC-206ENST00000413409 KCTD1Q719H9 257 aa19.14■□□□□ 0.65
PTPRC-206ENST00000413409 TEX2Q8IWB9 1127 aa19.14■□□□□ 0.65
PTPRC-206ENST00000413409 KIAA1524Q8TCG1 905 aa19.14■□□□□ 0.65
PTPRC-206ENST00000413409 ZNF830Q96NB3 372 aaPredicted RBP19.14■□□□□ 0.65
PTPRC-206ENST00000413409 PHOX2BQ99453 314 aa19.14■□□□□ 0.65
PTPRC-206ENST00000413409 RMND1Q9NWS8 449 aa19.14■□□□□ 0.65
PTPRC-206ENST00000413409 CCNT1O60563 726 aaKnown RBP19.13■□□□□ 0.65
PTPRC-206ENST00000413409 STAT6P42226 847 aa19.13■□□□□ 0.65
PTPRC-206ENST00000413409 PSMC6P62333 389 aa19.13■□□□□ 0.65
PTPRC-206ENST00000413409 JAKMIP3Q5VZ66 844 aa19.13■□□□□ 0.65
PTPRC-206ENST00000413409 BTNL9Q6UXG8 535 aa19.13■□□□□ 0.65
PTPRC-206ENST00000413409 ARMCX2Q7L311 632 aa19.13■□□□□ 0.65
PTPRC-206ENST00000413409 DEFB128Q7Z7B8 93 aa19.13■□□□□ 0.65
PTPRC-206ENST00000413409 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.13■□□□□ 0.65
PTPRC-206ENST00000413409 XPO4Q9C0E2 1151 aaKnown RBP19.13■□□□□ 0.65
PTPRC-206ENST00000413409 IFNKQ9P0W0 207 aa19.13■□□□□ 0.65
PTPRC-206ENST00000413409 ZNF318Q5VUA4 2279 aa19.13■□□□□ 0.65
PTPRC-206ENST00000413409 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.12■□□□□ 0.65
PTPRC-206ENST00000413409 NDUFB10O96000 172 aa19.12■□□□□ 0.65
PTPRC-206ENST00000413409 GCFC2P16383 781 aaKnown RBP19.12■□□□□ 0.65
PTPRC-206ENST00000413409 UBA7P41226 1012 aa19.12■□□□□ 0.65
PTPRC-206ENST00000413409 AFMP43652 599 aa19.12■□□□□ 0.65
PTPRC-206ENST00000413409 QRICH1Q2TAL8 776 aa19.12■□□□□ 0.65
PTPRC-206ENST00000413409 FAM83BQ5T0W9 1011 aa19.12■□□□□ 0.65
PTPRC-206ENST00000413409 SNRNP48Q6IEG0 339 aaKnown RBP19.12■□□□□ 0.65
PTPRC-206ENST00000413409 SH2D4AQ9H788 454 aa19.12■□□□□ 0.65
PTPRC-206ENST00000413409 UBE2ZQ9H832 354 aaPredicted RBP19.12■□□□□ 0.65
PTPRC-206ENST00000413409 TMEM260Q9NX78 707 aa19.12■□□□□ 0.65
PTPRC-206ENST00000413409 PYCARDQ9ULZ3 195 aa19.12■□□□□ 0.65
PTPRC-206ENST00000413409 SCN5AQ14524 2016 aa19.12■□□□□ 0.65
PTPRC-206ENST00000413409 F5H6K3 240 aa19.11■□□□□ 0.65
PTPRC-206ENST00000413409 CABYRO75952 493 aa19.11■□□□□ 0.65
PTPRC-206ENST00000413409 ALADP13716 330 aa19.11■□□□□ 0.65
PTPRC-206ENST00000413409 IL9P15248 144 aa19.11■□□□□ 0.65
PTPRC-206ENST00000413409 ZNF18P17022 549 aa19.11■□□□□ 0.65
PTPRC-206ENST00000413409 SLC16A2P36021 539 aa19.11■□□□□ 0.65
PTPRC-206ENST00000413409 FXR2P51116 673 aaKnown RBP eCLIP19.11■□□□□ 0.65
PTPRC-206ENST00000413409 KLRC3Q07444 240 aa19.11■□□□□ 0.65
PTPRC-206ENST00000413409 CDC37Q16543 378 aaPredicted RBP19.11■□□□□ 0.65
PTPRC-206ENST00000413409 PPP4R3AQ6IN85 833 aa19.11■□□□□ 0.65
PTPRC-206ENST00000413409 HERC6Q8IVU3 1022 aa19.11■□□□□ 0.65
PTPRC-206ENST00000413409 CCDC150Q8NCX0 1101 aa19.11■□□□□ 0.65
PTPRC-206ENST00000413409 MTMR9Q96QG7 549 aa19.11■□□□□ 0.65
PTPRC-206ENST00000413409 TEX13BQ9BXU2 312 aa19.11■□□□□ 0.65
PTPRC-206ENST00000413409 KCNH6Q9H252 994 aa19.11■□□□□ 0.65
PTPRC-206ENST00000413409 GNEQ9Y223 722 aaKnown RBP19.11■□□□□ 0.65
PTPRC-206ENST00000413409 POTEB3A0JP26 581 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms