RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 NR1I3Q14994 352 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 FAM110CQ1W6H9 321 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 CCDC144BQ3MJ40 725 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 ANKRD40Q6AI12 368 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 ABHD15Q6UXT9 468 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 SAPCD2Q86UD0 394 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 ZC3H3Q8IXZ2 948 aaKnown RBP6.12□□□□□ -1.43
EPHA4-202ENST00000409854 GLIS3Q8NEA6 775 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 SMCR8Q8TEV9 937 aaPredicted RBP6.12□□□□□ -1.43
EPHA4-202ENST00000409854 CTAGE1Q96RT6 745 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 MPHOSPH6Q99547 160 aaKnown RBP6.12□□□□□ -1.43
EPHA4-202ENST00000409854 FGFBP2Q9BYJ0 223 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 ANKEF1Q9NU02 776 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 SLC9A2Q9UBY0 812 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 PCDHA10Q9Y5I2 948 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 IGKV6D-21A0A0A0MT36 114 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 MANSC4A6NHS7 340 aaPredicted RBP6.12□□□□□ -1.43
EPHA4-202ENST00000409854 ZBTB39O15060 712 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 SERPINC1P01008 464 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 EEF1GP26641 437 aaKnown RBP6.12□□□□□ -1.43
EPHA4-202ENST00000409854 PBX1P40424 430 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 RARRES1P49788 294 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 MKRN3Q13064 507 aaKnown RBP6.12□□□□□ -1.43
EPHA4-202ENST00000409854 MAPK7Q13164 816 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 ZNF792Q3KQV3 632 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 TCP11X2Q5H9J9 407 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 ZNF467Q7Z7K2 595 aaPredicted RBP6.12□□□□□ -1.43
EPHA4-202ENST00000409854 VSTM4Q8IW00 320 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 MYOCDQ8IZQ8 938 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 ANKRD13CQ8N6S4 541 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 ZNF526Q8TF50 670 aaPredicted RBP6.12□□□□□ -1.43
EPHA4-202ENST00000409854 SECISBP2LQ93073 1101 aaKnown RBP6.12□□□□□ -1.43
EPHA4-202ENST00000409854 TIPINQ9BVW5 301 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 KCTD10Q9H3F6 313 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 EFCC1Q9HA90 598 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 SEL1LQ9UBV2 794 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 TCEAL9Q9UHQ7 104 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 ZKSCAN5Q9Y2L8 839 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 UBE4BO95155 1302 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 SYNGAP1Q96PV0 1343 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 DOCK3Q8IZD9 2030 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 RSPH10B2B2RC85 870 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 KCNJ18B7U540 433 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 STRNO43815 780 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 KRT18P05783 430 aaKnown RBP6.12□□□□□ -1.43
EPHA4-202ENST00000409854 PGK2P07205 417 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 PSAPP07602 524 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 RSPH10BP0C881 870 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 UBA1P22314 1058 aaKnown RBP6.12□□□□□ -1.43
EPHA4-202ENST00000409854 ACTR2P61160 394 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 CACNB1Q02641 598 aaPredicted RBP6.12□□□□□ -1.43
EPHA4-202ENST00000409854 KCNJ12Q14500 433 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 HERC4Q5GLZ8 1057 aaPredicted RBP6.12□□□□□ -1.43
EPHA4-202ENST00000409854 RGMBQ6NW40 437 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 KCNV1Q6PIU1 500 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 ZSCAN30Q86W11 494 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 SFR1Q86XK3 245 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 SPC24Q8NBT2 197 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 SCFD1Q8WVM8 642 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 FIZ1Q96SL8 496 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 KCNF1Q9H3M0 494 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 BCAS3Q9H6U6 928 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 NRBP1Q9UHY1 535 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 COL4A3BPQ9Y5P4 624 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 TLL2Q9Y6L7 1015 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.12□□□□□ -1.43
EPHA4-202ENST00000409854 CASP8AP2Q9UKL3 1982 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 ARHGEF35A5YM69 484 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 FAM155AB1AL88 458 aaPredicted RBP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 EIF3DO15371 548 aaKnown RBP eCLIP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 DKC1O60832 514 aaKnown RBP eCLIP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 COBLO75128 1261 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 FARP2O94887 1054 aaPredicted RBP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 KIF20AO95235 890 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 SUPT20HL2P0C7V6 817 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 YWHABP31946 246 aaKnown RBP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 TBX2Q13207 712 aaPredicted RBP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 MAPK8IP2Q13387 824 aaPredicted RBP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 GRB14Q14449 540 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 KRT31Q15323 416 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 LRRC55Q6ZSA7 311 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 ATP6V0A1Q93050 837 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 HHIPL1Q96JK4 782 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 TRIM47Q96LD4 638 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 STRA6Q9BX79 667 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 TELO2Q9Y4R8 837 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 SAMM50Q9Y512 469 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 ASB14A6NK59 587 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 IGF2BP3O00425 579 aaKnown RBP eCLIP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 KIF3CO14782 793 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 ZNF862O60290 1169 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 TBCAO75347 108 aaKnown RBP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 MAPTP10636 758 aaKnown RBP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 CASP5P51878 434 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 RAD51AP2Q09MP3 1159 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 NEDD9Q14511 834 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 TPD52L1Q16890 204 aaPredicted RBP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 HSP90AA4PQ58FG1 418 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 PADI6Q6TGC4 694 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 CCDC186Q7Z3E2 898 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms