RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 SNX30Q5VWJ9 437 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 THEMISQ8N1K5 641 aaPredicted RBP16.28■□□□□ 0.2
VLDLR-202ENST00000382099 FAM133AQ8N9E0 248 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 UTP4Q969X6 686 aaKnown RBP16.28■□□□□ 0.2
VLDLR-202ENST00000382099 TSPAN18Q96SJ8 248 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 RANBP17Q9H2T7 1088 aaKnown RBP16.28■□□□□ 0.2
VLDLR-202ENST00000382099 DBR1Q9UK59 544 aaKnown RBP16.28■□□□□ 0.2
VLDLR-202ENST00000382099 PDS5AQ29RF7 1337 aaKnown RBP16.28■□□□□ 0.2
VLDLR-202ENST00000382099 CCDC160A6NGH7 325 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 PSMA7O14818 248 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 EPHB2P29323 1055 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 VHLP40337 213 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 RPS6KA1Q15418 735 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 KIAA0753Q2KHM9 967 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 TMEM67Q5HYA8 995 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 WDR60Q8WVS4 1066 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 TLCD1Q96CP7 247 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 NMD3Q96D46 503 aaKnown RBP16.28■□□□□ 0.2
VLDLR-202ENST00000382099 FMO2Q99518 471 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 TXLNGQ9NUQ3 528 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 SLC12A7Q9Y666 1083 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 NFAT5O94916 1531 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 CCDC169A6NNP5 214 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 E7ENQ6 273 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 WFS1O76024 890 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 ERFP50548 548 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 DIXDC1Q155Q3 683 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 SLC44A4Q53GD3 710 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 CFAP157Q5JU67 520 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 IQCDQ96DY2 449 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.28■□□□□ 0.22e-6■■■■■ 149.1
VLDLR-202ENST00000382099 FAM114A2Q9NRY5 505 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 PDP2Q9P2J9 529 aa16.28■□□□□ 0.2
VLDLR-202ENST00000382099 UTP11Q9Y3A2 253 aaKnown RBP16.28■□□□□ 0.2
VLDLR-202ENST00000382099 PALLDQ8WX93 1383 aa16.27■□□□□ 0.2
VLDLR-202ENST00000382099 AKAP4Q5JQC9 854 aa16.27■□□□□ 0.2
VLDLR-202ENST00000382099 ADAT2Q7Z6V5 191 aaKnown RBP16.27■□□□□ 0.2
VLDLR-202ENST00000382099 ZBTB8BQ8NAP8 495 aaPredicted RBP16.27■□□□□ 0.2
VLDLR-202ENST00000382099 WASF1Q92558 559 aa16.27■□□□□ 0.2
VLDLR-202ENST00000382099 DNAJC1Q96KC8 554 aaKnown RBP16.27■□□□□ 0.2
VLDLR-202ENST00000382099 SPATA16Q9BXB7 569 aa16.27■□□□□ 0.2
VLDLR-202ENST00000382099 FAM192AQ9GZU8 254 aa16.27■□□□□ 0.2
VLDLR-202ENST00000382099 TMOD4Q9NZQ9 345 aa16.27■□□□□ 0.2
VLDLR-202ENST00000382099 MST1RQ04912 1400 aa16.27■□□□□ 0.2
VLDLR-202ENST00000382099 UNC5CO95185 931 aa16.27■□□□□ 0.19
VLDLR-202ENST00000382099 EIF3BP55884 814 aaKnown RBP16.27■□□□□ 0.19
VLDLR-202ENST00000382099 ASRGL1Q7L266 308 aa16.27■□□□□ 0.19
VLDLR-202ENST00000382099 SH3RF1Q7Z6J0 888 aa16.27■□□□□ 0.19
VLDLR-202ENST00000382099 DAAM2Q86T65 1068 aa16.27■□□□□ 0.19
VLDLR-202ENST00000382099 ERP27Q96DN0 273 aa16.27■□□□□ 0.19
VLDLR-202ENST00000382099 ZNF333Q96JL9 665 aa16.27■□□□□ 0.19
VLDLR-202ENST00000382099 CNOT6LQ96LI5 555 aaKnown RBP16.27■□□□□ 0.19
VLDLR-202ENST00000382099 FAM81BQ96LP2 452 aa16.27■□□□□ 0.19
VLDLR-202ENST00000382099 SLX1AQ9BQ83 275 aa16.27■□□□□ 0.19
VLDLR-202ENST00000382099 MAP3K15Q6ZN16 1313 aa16.27■□□□□ 0.19
VLDLR-202ENST00000382099 GRID2IPA4D2P6 1211 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 LRRC53A6NM62 1247 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 RNMTO43148 476 aaKnown RBP16.26■□□□□ 0.19
VLDLR-202ENST00000382099 ITGA6P23229 1130 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 MMP13P45452 471 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 RCN1Q15293 331 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 CYB5R4Q7L1T6 521 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 HS2ST1Q7LGA3 356 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 SESTD1Q86VW0 696 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 IFT43Q96FT9 208 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 CENPKQ9BS16 269 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 TRIM51Q9BSJ1 452 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 ARHGAP23Q9P227 1491 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 SLIT1O75093 1534 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 hCG_1642624A0A1W2PR95 340 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 TMEM110-MUSTN1A8MSY1 372 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 OPHN1O60890 802 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 GNAT2P19087 354 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 ZNF653Q96CK0 615 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 MYD88Q99836 296 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 MTA3Q9BTC8 594 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 TANGO6Q9C0B7 1094 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 ZMYND12Q9H0C1 365 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 IGKV5-2P06315 115 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 DZIP3Q86Y13 1208 aaKnown RBP16.26■□□□□ 0.19
VLDLR-202ENST00000382099 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.26■□□□□ 0.19
VLDLR-202ENST00000382099 MPP4Q96JB8 637 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 AGBL1Q96MI9 1066 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 INPP4AQ96PE3 977 aaPredicted RBP16.26■□□□□ 0.19
VLDLR-202ENST00000382099 SIKE1Q9BRV8 207 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 ARHGEF38Q9NXL2 777 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 TUBGCP4Q9UGJ1 667 aa16.26■□□□□ 0.19
VLDLR-202ENST00000382099 ABCC12Q96J65 1359 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 HEG1Q9ULI3 1381 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 MYH7BA7E2Y1 1941 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 A6NJR5 290 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 GTPBP6O43824 516 aaPredicted RBP16.25■□□□□ 0.19
VLDLR-202ENST00000382099 GCP02774 474 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 PLTPP55058 493 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 CTDSPL2Q05D32 466 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 CCDC80Q76M96 950 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 NANOGNBQ7Z5D8 188 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 PALB2Q86YC2 1186 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 NEK9Q8TD19 979 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 TIPINQ9BVW5 301 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms