RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 ANGPTL2Q9UKU9 493 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 SCAF8Q9UPN6 1271 aaKnown RBP12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 PRPF3O43395 683 aaKnown RBP12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 SMIM5Q71RC9 77 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 ZNF668Q96K58 619 aaPredicted RBP12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 MTIF3Q9H2K0 278 aaKnown RBP12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 TLR3O15455 904 aaKnown RBP12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 PRR29P0C7W0 189 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 POLR2BP30876 1174 aaKnown RBP12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 LRRC23Q53EV4 343 aaPredicted RBP12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 ASPRV1Q53RT3 343 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 PIP4K2CQ8TBX8 421 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 PTCH1Q13635 1447 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 PALMO75781 387 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 ELAC2Q9BQ52 826 aaKnown RBP12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 ZNF341Q9BYN7 854 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 SLC24A3Q9HC58 644 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 GJB4Q9NTQ9 266 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 STK17AQ9UEE5 414 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 RASGRF2O14827 1237 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 WDR46O15213 610 aaKnown RBP12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 USP17L8P0C7I0 530 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 C10orf76Q5T2E6 689 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 SARM1Q6SZW1 724 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 SEC31BQ9NQW1 1179 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 H0YCG3 227 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 TTC4O95801 387 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 CASP1P29466 404 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 NAA30Q147X3 362 aaPredicted RBP12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 ICE2Q659A1 982 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 DARS2Q6PI48 645 aaKnown RBP12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 RNF207Q6ZRF8 634 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 PDZD4Q76G19 769 aaPredicted RBP12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 SZRD1Q7Z422 152 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 SDCCAG3Q96C92 435 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 FMO2Q99518 471 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 ATP7BP35670 1465 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 MGEA5O60502 916 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 ACTN1P12814 892 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 BASP1P80723 227 aaKnown RBP12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 CCDC144BQ3MJ40 725 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 C7orf31Q8N865 590 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 TRIM11Q96F44 468 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 HESX1Q9UBX0 185 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 AATKQ6ZMQ8 1374 aa12.91□□□□□ -0.34
PCDHA9-201ENST00000378122 GOLGA8SH3BPF8 625 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 HNRNPDLO14979 420 aaKnown RBP12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 KCTD6Q8NC69 237 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 DEPDC1BQ8WUY9 529 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 TSC22D3Q99576 134 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 EPC1Q9H2F5 836 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 KMT5AQ9NQR1 393 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 EMILIN3Q9NT22 766 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 ABHD10Q9NUJ1 306 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 ERBB3P21860 1342 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 XDHP47989 1333 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 TRIM49BA6NDI0 452 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 INO80B-WBP1J3KQ70 363 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 PLEKHA8P1O95397 391 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 DYNLL2Q96FJ2 89 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 INO80BQ9C086 356 aaPredicted RBP12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 PIH1D3Q9NQM4 214 aaKnown RBP12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 NEK9Q8TD19 979 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 MAML1Q92585 1016 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 NDST4Q9H3R1 872 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 RNF14Q9UBS8 474 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 APOEP02649 317 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 MT-ND3P03897 115 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 CCNE1P24864 410 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 SLMAPQ14BN4 828 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 ACSL3O95573 720 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 TTLL1O95922 423 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 BEND6Q5SZJ8 279 aaPredicted RBP12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 YIPF2Q9BWQ6 316 aa12.9□□□□□ -0.34
PCDHA9-201ENST00000378122 EXOC1LA0A1B0GW35 172 aa12.9□□□□□ -0.35
PCDHA9-201ENST00000378122 PLA2G4BP0C869 781 aa12.9□□□□□ -0.35
PCDHA9-201ENST00000378122 ANKRD36BP1Q96IX9 119 aa12.9□□□□□ -0.35
PCDHA9-201ENST00000378122 HAUS8Q9BT25 410 aa12.9□□□□□ -0.35
PCDHA9-201ENST00000378122 BPIFB4P59827 614 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 MCUQ8NE86 351 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 PPP2R3CQ969Q6 453 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 CENPKQ9BS16 269 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 TUBB6Q9BUF5 446 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 NOP53Q9NZM5 478 aaKnown RBP12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 EPS15L1Q9UBC2 864 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 GDAQ9Y2T3 454 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 MCF2LO15068 1137 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 TADA3O75528 432 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 SKIP12755 728 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 NCF2P19878 526 aaPredicted RBP12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 USP17L2Q6R6M4 530 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 TRIM42Q8IWZ5 723 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 NRBP2Q9NSY0 501 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 ADD3Q9UEY8 706 aaKnown RBP12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 MORC2Q9Y6X9 1032 aaPredicted RBP12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 MMEP08473 750 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 DDIT3P35638 169 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 FKBP3Q00688 224 aaKnown RBP12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 CUL1Q13616 776 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 C6orf118Q5T5N4 469 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms