RNA–Protein interactions for RNA: ENST00000353546.7

ARFGAP1-201, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARFGAP1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-201ENST00000353546 ECT2Q9H8V3 914 aa18.38■□□□□ 0.53
ARFGAP1-201ENST00000353546 DNAAF2Q9NVR5 837 aaKnown RBP18.38■□□□□ 0.53
ARFGAP1-201ENST00000353546 PCDHA13Q9Y5I0 950 aa18.38■□□□□ 0.53
ARFGAP1-201ENST00000353546 USO1O60763 962 aaKnown RBP18.38■□□□□ 0.53
ARFGAP1-201ENST00000353546 MECOMQ03112 1051 aa18.38■□□□□ 0.53
ARFGAP1-201ENST00000353546 UBE4AQ14139 1066 aa18.38■□□□□ 0.53
ARFGAP1-201ENST00000353546 ITIH4Q14624 930 aa18.38■□□□□ 0.53
ARFGAP1-201ENST00000353546 ANKRD40Q6AI12 368 aa18.38■□□□□ 0.53
ARFGAP1-201ENST00000353546 PHC3Q8NDX5 983 aa18.38■□□□□ 0.53
ARFGAP1-201ENST00000353546 DHTKD1Q96HY7 919 aaPredicted RBP18.38■□□□□ 0.53
ARFGAP1-201ENST00000353546 SHBGP04278 402 aa18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 MAGEA10P43363 369 aaPredicted RBP18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 MTIF2P46199 727 aaKnown RBP18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 ERVK-9P63128 1117 aa18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 AGBL2Q5U5Z8 902 aa18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 LRRC34Q8IZ02 419 aa18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 CNOT6LQ96LI5 555 aaKnown RBP18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 CCDC42Q96M95 316 aa18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 CRNKL1Q9BZJ0 848 aaKnown RBP18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 NKX1-2Q9UD57 310 aaPredicted RBP18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 SWAP70Q9UH65 585 aa18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 DLEC1Q9Y238 1755 aa18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 FLT3P36888 993 aa18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 RFC5P40937 340 aa18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 KLHDC7AQ5VTJ3 777 aa18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 RETREG2Q8NC44 543 aa18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 PROCA1Q8NCQ7 364 aaPredicted RBP18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 UBLCP1Q8WVY7 318 aaPredicted RBP18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 P2RX5Q93086 422 aa18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 NEUROG2Q9H2A3 272 aa18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 PCDHA6Q9UN73 950 aa18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 PCDHA8Q9Y5H6 950 aa18.37■□□□□ 0.53
ARFGAP1-201ENST00000353546 NKRFO15226 690 aaKnown RBP eCLIP18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 PCK1P35558 622 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 MRPS35P82673 323 aaKnown RBP18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 PDE4DQ08499 809 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 MYBPC3Q14896 1274 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 CCDC178Q5BJE1 867 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 TMEM154Q6P9G4 183 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 KLHL29Q96CT2 875 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 DYNLL2Q96FJ2 89 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 NOC4LQ9BVI4 516 aaKnown RBP18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 CCSER1Q9C0I3 900 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 TRIM33Q9UPN9 1127 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 BUB1O43683 1085 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 USP17L8P0C7I0 530 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 MSH2P43246 934 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 STK4Q13043 487 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 TXNRD3Q86VQ6 643 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 KLHL7Q8IXQ5 586 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 MTMR8Q96EF0 704 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 SH3GLB2Q9NR46 395 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 FBXL5Q9UKA1 691 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 M0R2N6 131 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 ASAP2O43150 1006 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 SP100P23497 879 aaPredicted RBP18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 CCNE1P24864 410 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 PTF1AQ7RTS3 328 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 SLC17A8Q8NDX2 589 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 RBM17Q96I25 401 aaKnown RBP18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 PNMA2Q9UL42 364 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 MINPP1Q9UNW1 487 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 LRRC42Q9Y546 428 aa18.36■□□□□ 0.53
ARFGAP1-201ENST00000353546 SMAPO00193 183 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 PLCG1P19174 1290 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 TFAP4Q01664 338 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 TMEM62Q0P6H9 643 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 KRT71Q3SY84 523 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 MIIPQ5JXC2 388 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 FOXB2Q5VYV0 432 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 HEATR3Q7Z4Q2 680 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 PNMA1Q8ND90 353 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 PSMD1Q99460 953 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 MYH14Q7Z406 1995 aaKnown RBP18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 MMEP08473 750 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 VIMP08670 466 aaKnown RBP18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 FCER1AP12319 257 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 CHN1P15882 459 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 SEPT2Q15019 361 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 DDB1Q16531 1140 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 KIAA0825Q8IV33 1275 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 MARCH10Q8NA82 808 aaPredicted RBP18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 BICD1Q96G01 975 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 GPR101Q96P66 508 aaPredicted RBP18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 DLGAP2Q9P1A6 1054 aa18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.35■□□□□ 0.53
ARFGAP1-201ENST00000353546 ABCA3Q99758 1704 aa18.34■□□□□ 0.53
ARFGAP1-201ENST00000353546 BICDL2A1A5D9 508 aa18.34■□□□□ 0.53
ARFGAP1-201ENST00000353546 LBRQ14739 615 aaKnown RBP18.34■□□□□ 0.53
ARFGAP1-201ENST00000353546 SGSM1Q2NKQ1 1148 aa18.34■□□□□ 0.53
ARFGAP1-201ENST00000353546 CCDC38Q502W7 563 aa18.34■□□□□ 0.53
ARFGAP1-201ENST00000353546 DNAJC14Q6Y2X3 702 aaPredicted RBP18.34■□□□□ 0.53
ARFGAP1-201ENST00000353546 LONP2Q86WA8 852 aa18.34■□□□□ 0.53
ARFGAP1-201ENST00000353546 HPS3Q969F9 1004 aa18.34■□□□□ 0.53
ARFGAP1-201ENST00000353546 IL17RBQ9NRM6 502 aa18.34■□□□□ 0.53
ARFGAP1-201ENST00000353546 ATP8A2Q9NTI2 1148 aa18.34■□□□□ 0.53
ARFGAP1-201ENST00000353546 MCM9Q9NXL9 1143 aa18.34■□□□□ 0.53
ARFGAP1-201ENST00000353546 ATP6V1G1O75348 118 aa18.34■□□□□ 0.53
ARFGAP1-201ENST00000353546 ASIC1P78348 528 aa18.34■□□□□ 0.53
ARFGAP1-201ENST00000353546 CABP7Q86V35 215 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms