RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ZNF268Q14587 947 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-201ENST00000352993 NPY5RQ15761 445 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 CHRNA2Q15822 529 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 LONP2Q86WA8 852 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 VSIG1Q86XK7 387 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 KIAA0895Q8NCT3 520 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 ETNK1Q9HBU6 452 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 SEPT11Q9NVA2 429 aaKnown RBP8.3□□□□□ -1.08
BRCA1-201ENST00000352993 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.3□□□□□ -1.08
BRCA1-201ENST00000352993 DPPA5A6NC42 116 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 LINGO3P0C6S8 592 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 ECHS1P30084 290 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 BCAMP50895 628 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 RPS6KA3P51812 740 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 PUM3Q15397 648 aaKnown RBP8.3□□□□□ -1.08
BRCA1-201ENST00000352993 ORAI2Q96SN7 254 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 DDX23Q9BUQ8 820 aaKnown RBP8.3□□□□□ -1.08
BRCA1-201ENST00000352993 RAB17Q9H0T7 212 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 USP15Q9Y4E8 981 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-201ENST00000352993 CNTNAP5Q8WYK1 1306 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 SLIT3O75094 1523 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 CCDC188H7C350 402 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 IRS4O14654 1257 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-201ENST00000352993 RAB27AP51159 221 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 TROAPQ12815 778 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 SLC29A2Q14542 456 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 HGSNATQ68CP4 663 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 LBHD1Q9BQE6 289 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-201ENST00000352993 CEP72Q9P209 647 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 DAAM1Q9Y4D1 1078 aa8.3□□□□□ -1.08
BRCA1-201ENST00000352993 RARAP10276 462 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 PRPHP41219 470 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 USP11P51784 963 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 RCAN1P53805 252 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 FUT2Q10981 343 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 SEPT2Q15019 361 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 CCDC6Q16204 474 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 TCERG1LQ5VWI1 586 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 EPS8L3Q8TE67 593 aaKnown RBP8.29□□□□□ -1.08
BRCA1-201ENST00000352993 GLG1Q92896 1179 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 ZNF317Q96PQ6 595 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-201ENST00000352993 PCDHGC5Q9Y5F6 944 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 ONECUT3O60422 494 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-201ENST00000352993 TLR2O60603 784 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 LGR5O75473 907 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 FERP16591 822 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 FGFR4P22455 802 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 DR1Q01658 176 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 LAMB3Q13751 1172 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 PFKFB3Q16875 520 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-201ENST00000352993 MUM1Q2TAK8 710 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 TMEM154Q6P9G4 183 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 INTS8Q75QN2 995 aaKnown RBP8.29□□□□□ -1.08
BRCA1-201ENST00000352993 TAOK1Q7L7X3 1001 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 SCFD2Q8WU76 684 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 UIMC1Q96RL1 719 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 CCSER1Q9C0I3 900 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 KLHL14Q9P2G3 628 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 PCDHA4Q9UN74 947 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 AFF2P51816 1311 aa8.29□□□□□ -1.08
BRCA1-201ENST00000352993 USP17L12C9JPN9 530 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 USP17L21D6R901 530 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 RASGRF2O14827 1237 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 AHCYL1O43865 530 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 ARID4AP29374 1257 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-201ENST00000352993 ABL2P42684 1182 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 RBM5P52756 815 aaKnown RBP eCLIP8.28□□□□□ -1.08
BRCA1-201ENST00000352993 DYNLL1P63167 89 aaKnown RBP8.28□□□□□ -1.08
BRCA1-201ENST00000352993 KCNMA1Q12791 1236 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 ZNF211Q13398 564 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-201ENST00000352993 ASTE1Q2TB18 679 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-201ENST00000352993 ALKBH5Q6P6C2 394 aaKnown RBP8.28□□□□□ -1.08
BRCA1-201ENST00000352993 PIGWQ7Z7B1 504 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 ZBTB38Q8NAP3 1195 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-201ENST00000352993 LRRC15Q8TF66 581 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 STMN4Q9H169 189 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-201ENST00000352993 VAT1LQ9HCJ6 419 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 ADAM22Q9P0K1 906 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 SPEF2Q9C093 1822 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 SPDYE5A6NIY4 337 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 SNX3O60493 162 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 OR52Z1P0C646 297 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 ABCB4P21439 1286 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 TSNAXIP1Q2TAA8 658 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 CENPPQ6IPU0 288 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 VPS36Q86VN1 386 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 C4orf32Q8N8J7 132 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 U2AF1L4Q8WU68 220 aaKnown RBP8.28□□□□□ -1.08
BRCA1-201ENST00000352993 CENPTQ96BT3 561 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 DLGAP2Q9P1A6 1054 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 MTRF1LQ9UGC7 380 aaKnown RBP8.28□□□□□ -1.08
BRCA1-201ENST00000352993 AMFRQ9UKV5 643 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 COL4A3BPQ9Y5P4 624 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 DDAH1O94760 285 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 ACTN1P12814 892 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 ZNF131P52739 623 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 CTSWP56202 376 aa8.28□□□□□ -1.08
BRCA1-201ENST00000352993 RNASELQ05823 741 aaKnown RBP8.28□□□□□ -1.08
BRCA1-201ENST00000352993 PDCD2Q16342 344 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-201ENST00000352993 C6orf118Q5T5N4 469 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms