RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 GAS8O95995 478 aa12.99□□□□□ -0.33
CDH5-201ENST00000341529 NDUFB10O96000 172 aa12.99□□□□□ -0.33
CDH5-201ENST00000341529 CDC42EP5Q6NZY7 148 aa12.99□□□□□ -0.33
CDH5-201ENST00000341529 SCARA5Q6ZMJ2 495 aa12.99□□□□□ -0.33
CDH5-201ENST00000341529 VSIG1Q86XK7 387 aa12.99□□□□□ -0.33
CDH5-201ENST00000341529 IQCDQ96DY2 449 aa12.99□□□□□ -0.33
CDH5-201ENST00000341529 NT5C1BQ96P26 610 aa12.99□□□□□ -0.33
CDH5-201ENST00000341529 STMN4Q9H169 189 aaPredicted RBP12.99□□□□□ -0.33
CDH5-201ENST00000341529 CAPN11Q9UMQ6 739 aa12.99□□□□□ -0.33
CDH5-201ENST00000341529 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.99□□□□□ -0.33
CDH5-201ENST00000341529 HP1BP3Q5SSJ5 553 aaPredicted RBP12.99□□□□□ -0.33
CDH5-201ENST00000341529 SPATA4Q8NEY3 305 aa12.99□□□□□ -0.33
CDH5-201ENST00000341529 MASTLQ96GX5 879 aa12.99□□□□□ -0.33
CDH5-201ENST00000341529 SALL1Q9NSC2 1324 aa12.99□□□□□ -0.33
CDH5-201ENST00000341529 SYNJ2BP-COX16A0A087WUM0 186 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 INO80B-WBP1J3KQ70 363 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 NSFP46459 744 aaKnown RBP12.98□□□□□ -0.33
CDH5-201ENST00000341529 SPP2Q13103 211 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 GJB7Q6PEY0 223 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 INO80BQ9C086 356 aaPredicted RBP12.98□□□□□ -0.33
CDH5-201ENST00000341529 JMJD4Q9H9V9 463 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 FBXO28Q9NVF7 368 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 COX16Q9P0S2 106 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 MKRN1Q9UHC7 482 aaKnown RBP12.98□□□□□ -0.33
CDH5-201ENST00000341529 PVALEFA0A1B0GWK0 134 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 ACSL3O95573 720 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 COG1Q8WTW3 980 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 PNKPQ96T60 521 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 SPZ1Q9BXG8 430 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 POLLQ9UGP5 575 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 PCDHB4Q9Y5E5 795 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 THAP12O43422 761 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 TFAMQ00059 246 aaKnown RBP12.98□□□□□ -0.33
CDH5-201ENST00000341529 KNOP1Q1ED39 458 aaKnown RBP12.98□□□□□ -0.33
CDH5-201ENST00000341529 SBK1Q52WX2 424 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 CASC4Q6P4E1 433 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 SLC51AQ86UW1 340 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 VGLL2Q8N8G2 317 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 WDR11Q9BZH6 1224 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.98□□□□□ -0.33
CDH5-201ENST00000341529 RHOBTB3O94955 611 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 SRGAP2CP0DJJ0 459 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 PSMD2Q13200 908 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 DRAP1Q14919 205 aaPredicted RBP12.98□□□□□ -0.33
CDH5-201ENST00000341529 E2F4Q16254 413 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 PADI6Q6TGC4 694 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 INTS8Q75QN2 995 aaKnown RBP12.98□□□□□ -0.33
CDH5-201ENST00000341529 EXOC4Q96A65 974 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 APOL6Q9BWW8 343 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 IL17RBQ9NRM6 502 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 AMACRQ9UHK6 382 aa12.98□□□□□ -0.33
CDH5-201ENST00000341529 ARHGAP23Q9P227 1491 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 STX2P32856 288 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 PIK3CAP42336 1068 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 USP14P54578 494 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 RCSD1Q6JBY9 416 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 CYFIP1Q7L576 1253 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 DDX42Q86XP3 938 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDH5-201ENST00000341529 GIMAP8Q8ND71 665 aaPredicted RBP12.97□□□□□ -0.33
CDH5-201ENST00000341529 RMDN3Q96TC7 470 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 EIF2AK1Q9BQI3 630 aaKnown RBP12.97□□□□□ -0.33
CDH5-201ENST00000341529 RSPH10B2B2RC85 870 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 RSPH10BP0C881 870 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 SRGNP10124 158 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 MYBP10242 640 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 LMNB1P20700 586 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 MAPK4P31152 587 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 GNPTABQ3T906 1256 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 SESTD1Q86VW0 696 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 PPM1EQ8WY54 764 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 MPHOSPH6Q99547 160 aaKnown RBP12.97□□□□□ -0.33
CDH5-201ENST00000341529 GOLGA8KD6RF30 607 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 IPO5O00410 1097 aaKnown RBP12.97□□□□□ -0.33
CDH5-201ENST00000341529 CTNND1O60716 968 aaKnown RBP12.97□□□□□ -0.33
CDH5-201ENST00000341529 CLTAP09496 248 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 COPB2P35606 906 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 EZH2Q15910 746 aaKnown RBP12.97□□□□□ -0.33
CDH5-201ENST00000341529 GPR162Q16538 588 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 PODNQ7Z5L7 613 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 TTLL6Q8N841 843 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 FLAD1Q8NFF5 587 aa12.97□□□□□ -0.33
CDH5-201ENST00000341529 EIF3CLB5ME19 914 aaKnown RBP12.96□□□□□ -0.33
CDH5-201ENST00000341529 ATP8B1O43520 1251 aa12.96□□□□□ -0.33
CDH5-201ENST00000341529 MTM1Q13496 603 aa12.96□□□□□ -0.33
CDH5-201ENST00000341529 EIF3CQ99613 913 aaKnown RBP12.96□□□□□ -0.33
CDH5-201ENST00000341529 NUDT12Q9BQG2 462 aa12.96□□□□□ -0.33
CDH5-201ENST00000341529 REEP2Q9BRK0 252 aa12.96□□□□□ -0.33
CDH5-201ENST00000341529 TRIM6Q9C030 488 aaPredicted RBP12.96□□□□□ -0.33
CDH5-201ENST00000341529 CEP72Q9P209 647 aa12.96□□□□□ -0.33
CDH5-201ENST00000341529 TCHHQ07283 1943 aa12.96□□□□□ -0.33
CDH5-201ENST00000341529 ZNF131P52739 623 aa12.96□□□□□ -0.33
CDH5-201ENST00000341529 PTK2Q05397 1052 aa12.96□□□□□ -0.33
CDH5-201ENST00000341529 TNFAIP1Q13829 316 aa12.96□□□□□ -0.33
CDH5-201ENST00000341529 KCNB1Q14721 858 aa12.96□□□□□ -0.33
CDH5-201ENST00000341529 SGO2Q562F6 1265 aa12.96□□□□□ -0.33
CDH5-201ENST00000341529 FMNL3Q8IVF7 1028 aa12.96□□□□□ -0.33
CDH5-201ENST00000341529 CACNA2D3Q8IZS8 1091 aa12.96□□□□□ -0.33
CDH5-201ENST00000341529 RNF169Q8NCN4 708 aa12.96□□□□□ -0.33
CDH5-201ENST00000341529 LXNQ9BS40 222 aa12.96□□□□□ -0.33
CDH5-201ENST00000341529 PLAAQ9Y263 795 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms