RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 EXOSC10Q01780 885 aaKnown RBP10.46□□□□□ -0.73
PTCHD4-201ENST00000339488 TAF7Q15545 349 aaPredicted RBP10.46□□□□□ -0.73
PTCHD4-201ENST00000339488 CFAP221Q4G0U5 840 aa10.46□□□□□ -0.73
PTCHD4-201ENST00000339488 AGBL2Q5U5Z8 902 aa10.46□□□□□ -0.73
PTCHD4-201ENST00000339488 RRAGBQ5VZM2 374 aa10.46□□□□□ -0.73
PTCHD4-201ENST00000339488 NCSTNQ92542 709 aa10.46□□□□□ -0.73
PTCHD4-201ENST00000339488 DNAJC7Q99615 494 aa10.46□□□□□ -0.73
PTCHD4-201ENST00000339488 C14orf93Q9H972 538 aaKnown RBP10.46□□□□□ -0.73
PTCHD4-201ENST00000339488 ARHGAP23Q9P227 1491 aa10.46□□□□□ -0.74
PTCHD4-201ENST00000339488 NKRFO15226 690 aaKnown RBP eCLIP10.46□□□□□ -0.74
PTCHD4-201ENST00000339488 RAD21O60216 631 aa10.46□□□□□ -0.74
PTCHD4-201ENST00000339488 SKIP12755 728 aa10.46□□□□□ -0.74
PTCHD4-201ENST00000339488 SMARCA1P28370 1054 aa10.46□□□□□ -0.74
PTCHD4-201ENST00000339488 GRIA2P42262 883 aa10.46□□□□□ -0.74
PTCHD4-201ENST00000339488 TCP11X2Q5H9J9 407 aa10.46□□□□□ -0.74
PTCHD4-201ENST00000339488 SESTD1Q86VW0 696 aa10.46□□□□□ -0.74
PTCHD4-201ENST00000339488 C1orf131Q8NDD1 294 aaKnown RBP10.46□□□□□ -0.74
PTCHD4-201ENST00000339488 RUBCNQ92622 972 aa10.46□□□□□ -0.74
PTCHD4-201ENST00000339488 CCDC127Q96BQ5 260 aa10.46□□□□□ -0.74
PTCHD4-201ENST00000339488 EPSTI1Q96J88 318 aa10.46□□□□□ -0.74
PTCHD4-201ENST00000339488 ANKRD27Q96NW4 1050 aa10.46□□□□□ -0.74
PTCHD4-201ENST00000339488 MRGBPQ9NV56 204 aa10.46□□□□□ -0.74
PTCHD4-201ENST00000339488 CROTQ9UKG9 612 aa10.46□□□□□ -0.74
PTCHD4-201ENST00000339488 PTPRUQ92729 1446 aa10.46□□□□□ -0.74
PTCHD4-201ENST00000339488 SETBP1Q9Y6X0 1596 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 CCDC160A6NGH7 325 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 CREB1P16220 341 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 GPSM2P81274 684 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 NT5DC1Q5TFE4 455 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 ANKRD42Q8N9B4 389 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 LPIN2Q92539 896 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 TCHPQ9BT92 498 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 FAM192AQ9GZU8 254 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 CTTNBP2NLQ9P2B4 639 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 HEMK1Q9Y5R4 338 aaPredicted RBP10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 COMMD3-BMI1R4GMX3 469 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 SLIT1O75093 1534 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 LMTK3Q96Q04 1460 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 WFS1O76024 890 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 CBX6O95503 412 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 ASMTLO95671 621 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 BCRP11274 1271 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 VHLP40337 213 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 ARFIP2P53365 341 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 ITIH3Q06033 890 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 SPA17Q15506 151 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 KLHDC7AQ5VTJ3 777 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 HDGFL2Q7Z4V5 671 aaPredicted RBP10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 TXNDC2Q86VQ3 553 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 SIX5Q8N196 739 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 CCDC42Q96M95 316 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 CELF4Q9BZC1 486 aaKnown RBP10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 DDX47Q9H0S4 455 aaKnown RBP10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 HPS5Q9UPZ3 1129 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 PCDHA13Q9Y5I0 950 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 WASF2Q9Y6W5 498 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 CDC42BPGQ6DT37 1551 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 RFX7Q2KHR2 1363 aa10.45□□□□□ -0.74
PTCHD4-201ENST00000339488 TTLL13PA6NNM8 815 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 ITGA6P23229 1130 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 HOXA10P31260 410 aaPredicted RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 PPP1R2P41236 205 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 NSUN2Q08J23 767 aaKnown RBP eCLIP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 WDR72Q3MJ13 1102 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 RC3H1Q5TC82 1133 aaKnown RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 TBC1D9BQ66K14 1250 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 SPTY2D1Q68D10 685 aaPredicted RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 PPP1R2P3Q6NXS1 205 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 MB21D1Q8N884 522 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 PPFIBP2Q8ND30 876 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 TLCD1Q96CP7 247 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 ERP27Q96DN0 273 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 LTV1Q96GA3 475 aaPredicted RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 CATSPER2Q96P56 530 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 NUP85Q9BW27 656 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 CSRNP2Q9H175 543 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 MYLK2Q9H1R3 596 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 DHX36Q9H2U1 1008 aaKnown RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 THAP9Q9H5L6 903 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 PDP2Q9P2J9 529 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 ANKARQ7Z5J8 1434 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 NUTM2BA6NNL0 878 aaPredicted RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 NUTM2EB1AL46 878 aaPredicted RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 CAPN9O14815 690 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 OPHN1O60890 802 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 SUN1O94901 812 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 UNC5CO95185 931 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 OXSR1O95747 527 aaPredicted RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 OAS1P00973 400 aaKnown RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 GEMIN4P57678 1058 aaKnown RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 SULT2A1Q06520 285 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 EHHADHQ08426 723 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 SH2D4BQ5SQS7 431 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 VSIG1Q86XK7 387 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 RAB3IPQ96QF0 476 aaPredicted RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 KIAA1683Q9H0B3 1180 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 NSRP1Q9H0G5 558 aaKnown RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 CNOT10Q9H9A5 744 aaKnown RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 CEP72Q9P209 647 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms