RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CFAP45Q9UL16 551 aa23.85■■□□□ 1.41
SMCO4-201ENST00000298966 COL4A6Q14031 1691 aa23.84■■□□□ 1.41
SMCO4-201ENST00000298966 C17orf102A2RUQ5 167 aa23.84■■□□□ 1.41
SMCO4-201ENST00000298966 SORBS3O60504 671 aa23.84■■□□□ 1.41
SMCO4-201ENST00000298966 TRAF1Q13077 416 aa23.84■■□□□ 1.41
SMCO4-201ENST00000298966 SKOR2Q2VWA4 1001 aaPredicted RBP23.84■■□□□ 1.41
SMCO4-201ENST00000298966 MFSD14AQ96MC6 490 aa23.84■■□□□ 1.41
SMCO4-201ENST00000298966 CYTH3O43739 400 aa23.83■■□□□ 1.41
SMCO4-201ENST00000298966 PPFIA3O75145 1194 aa23.83■■□□□ 1.41
SMCO4-201ENST00000298966 GGPS1O95749 300 aa23.83■■□□□ 1.41
SMCO4-201ENST00000298966 MYCLP12524 364 aaPredicted RBP23.83■■□□□ 1.41
SMCO4-201ENST00000298966 U2AF2P26368 475 aaKnown RBP eCLIP23.83■■□□□ 1.41
SMCO4-201ENST00000298966 GNL2Q13823 731 aaKnown RBP23.83■■□□□ 1.41
SMCO4-201ENST00000298966 HSDL1Q3SXM5 330 aa23.83■■□□□ 1.41
SMCO4-201ENST00000298966 CELF3Q5SZQ8 465 aaKnown RBP23.83■■□□□ 1.41
SMCO4-201ENST00000298966 RPAINQ86UA6 219 aa23.83■■□□□ 1.41
SMCO4-201ENST00000298966 FERMT3Q86UX7 667 aa23.83■■□□□ 1.41
SMCO4-201ENST00000298966 TMEM87AQ8NBN3 555 aa23.83■■□□□ 1.41
SMCO4-201ENST00000298966 AIFM3Q96NN9 605 aa23.83■■□□□ 1.41
SMCO4-201ENST00000298966 PHF20Q9BVI0 1012 aa23.83■■□□□ 1.41
SMCO4-201ENST00000298966 IFIH1Q9BYX4 1025 aaKnown RBP23.83■■□□□ 1.41
SMCO4-201ENST00000298966 SCAND2PQ9GZW5 306 aaPredicted RBP23.83■■□□□ 1.41
SMCO4-201ENST00000298966 IRS1P35568 1242 aa23.82■■□□□ 1.4
SMCO4-201ENST00000298966 GUCY1B3Q02153 619 aa23.82■■□□□ 1.4
SMCO4-201ENST00000298966 PPP1R18Q6NYC8 613 aa23.82■■□□□ 1.4
SMCO4-201ENST00000298966 HFE2Q6ZVN8 426 aa23.82■■□□□ 1.4
SMCO4-201ENST00000298966 TEX2Q8IWB9 1127 aa23.82■■□□□ 1.4
SMCO4-201ENST00000298966 MTMR8Q96EF0 704 aa23.82■■□□□ 1.4
SMCO4-201ENST00000298966 POP1Q99575 1024 aaKnown RBP23.82■■□□□ 1.4
SMCO4-201ENST00000298966 VAT1LQ9HCJ6 419 aa23.82■■□□□ 1.4
SMCO4-201ENST00000298966 CAND2O75155 1236 aa23.81■■□□□ 1.4
SMCO4-201ENST00000298966 CTSHP09668 335 aa23.81■■□□□ 1.4
SMCO4-201ENST00000298966 FIBCD1Q8N539 461 aa23.81■■□□□ 1.4
SMCO4-201ENST00000298966 PDCD2LQ9BRP1 358 aa23.81■■□□□ 1.4
SMCO4-201ENST00000298966 C16orf70Q9BSU1 422 aa23.81■■□□□ 1.4
SMCO4-201ENST00000298966 MLXIPQ9HAP2 919 aa23.81■■□□□ 1.4
SMCO4-201ENST00000298966 LMBRD1Q9NUN5 540 aa23.81■■□□□ 1.4
SMCO4-201ENST00000298966 BARHL2Q9NY43 387 aa23.81■■□□□ 1.4
SMCO4-201ENST00000298966 PNMA6FA0A0J9YX94 578 aa23.8■■□□□ 1.4
SMCO4-201ENST00000298966 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.8■■□□□ 1.4
SMCO4-201ENST00000298966 ESYT2A0FGR8 921 aa23.8■■□□□ 1.4
SMCO4-201ENST00000298966 H3BRB1 525 aa23.8■■□□□ 1.4
SMCO4-201ENST00000298966 RGS20O76081 388 aa23.8■■□□□ 1.4
SMCO4-201ENST00000298966 CTNNB1P35222 781 aa23.8■■□□□ 1.4
SMCO4-201ENST00000298966 KRT2P35908 639 aa23.8■■□□□ 1.4
SMCO4-201ENST00000298966 HSD17B4P51659 736 aa23.8■■□□□ 1.4
SMCO4-201ENST00000298966 FOSBP53539 338 aa23.8■■□□□ 1.4
SMCO4-201ENST00000298966 APBB2Q92870 758 aa23.8■■□□□ 1.4
SMCO4-201ENST00000298966 AMNQ9BXJ7 453 aa23.8■■□□□ 1.4
SMCO4-201ENST00000298966 LMAN2LQ9H0V9 348 aa23.8■■□□□ 1.4
SMCO4-201ENST00000298966 TUT1Q9H6E5 874 aaKnown RBP23.8■■□□□ 1.4
SMCO4-201ENST00000298966 JMJD4Q9H9V9 463 aa23.8■■□□□ 1.4
SMCO4-201ENST00000298966 ATG2AQ2TAZ0 1938 aa23.79■■□□□ 1.4
SMCO4-201ENST00000298966 ZBTB5O15062 677 aa23.79■■□□□ 1.4
SMCO4-201ENST00000298966 TREHO43280 583 aa23.79■■□□□ 1.4
SMCO4-201ENST00000298966 RB1P06400 928 aa23.79■■□□□ 1.4
SMCO4-201ENST00000298966 SMIM10L2AP0DMW4 78 aa23.79■■□□□ 1.4
SMCO4-201ENST00000298966 SMIM10L2BP0DMW5 78 aa23.79■■□□□ 1.4
SMCO4-201ENST00000298966 TGFB3P10600 412 aa23.79■■□□□ 1.4
SMCO4-201ENST00000298966 UBA1P22314 1058 aaKnown RBP23.79■■□□□ 1.4
SMCO4-201ENST00000298966 LTBRP36941 435 aa23.79■■□□□ 1.4
SMCO4-201ENST00000298966 SMAD2Q15796 467 aaKnown RBP23.79■■□□□ 1.4
SMCO4-201ENST00000298966 DIS3L2Q8IYB7 885 aaKnown RBP23.79■■□□□ 1.4
SMCO4-201ENST00000298966 DAGLBQ8NCG7 672 aa23.79■■□□□ 1.4
SMCO4-201ENST00000298966 GLT8D2Q9H1C3 349 aa23.79■■□□□ 1.4
SMCO4-201ENST00000298966 MAP3K20Q9NYL2 800 aaKnown RBP23.79■■□□□ 1.4
SMCO4-201ENST00000298966 VPS54Q9P1Q0 977 aa23.79■■□□□ 1.4
SMCO4-201ENST00000298966 TRAK2O60296 914 aa23.78■■□□□ 1.4
SMCO4-201ENST00000298966 GNA11P29992 359 aa23.78■■□□□ 1.4
SMCO4-201ENST00000298966 HOXC8P31273 242 aa23.78■■□□□ 1.4
SMCO4-201ENST00000298966 NLRP5P59047 1200 aa23.78■■□□□ 1.4
SMCO4-201ENST00000298966 GHRHRQ02643 423 aa23.78■■□□□ 1.4
SMCO4-201ENST00000298966 DNM1Q05193 864 aaKnown RBP23.78■■□□□ 1.4
SMCO4-201ENST00000298966 CLUL1Q15846 466 aa23.78■■□□□ 1.4
SMCO4-201ENST00000298966 SLC35G1Q2M3R5 365 aa23.78■■□□□ 1.4
SMCO4-201ENST00000298966 CTC1Q2NKJ3 1217 aa23.78■■□□□ 1.4
SMCO4-201ENST00000298966 VSIG10LQ86VR7 867 aa23.78■■□□□ 1.4
SMCO4-201ENST00000298966 NOSTRINQ8IVI9 506 aa23.78■■□□□ 1.4
SMCO4-201ENST00000298966 C11orf84Q9BUA3 381 aaPredicted RBP23.78■■□□□ 1.4
SMCO4-201ENST00000298966 RNPEPQ9H4A4 650 aa23.78■■□□□ 1.4
SMCO4-201ENST00000298966 MUTYHQ9UIF7 546 aa23.78■■□□□ 1.4
SMCO4-201ENST00000298966 RWDD3Q9Y3V2 267 aa23.78■■□□□ 1.4
SMCO4-201ENST00000298966 TECTAO75443 2155 aa23.77■■□□□ 1.4
SMCO4-201ENST00000298966 MBTPS2O43462 519 aa23.77■■□□□ 1.4
SMCO4-201ENST00000298966 LGALS2P05162 132 aa23.77■■□□□ 1.4
SMCO4-201ENST00000298966 GNAT1P11488 350 aa23.77■■□□□ 1.4
SMCO4-201ENST00000298966 HERC4Q5GLZ8 1057 aaPredicted RBP23.77■■□□□ 1.4
SMCO4-201ENST00000298966 HEATR3Q7Z4Q2 680 aa23.77■■□□□ 1.4
SMCO4-201ENST00000298966 BICD2Q8TD16 824 aa23.77■■□□□ 1.4
SMCO4-201ENST00000298966 PIGSQ96S52 555 aa23.77■■□□□ 1.4
SMCO4-201ENST00000298966 WDFY4Q6ZS81 3184 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 C5orf67F2Z3F1 127 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 STXBP3O00186 592 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 NOP56O00567 594 aaKnown RBP23.76■■□□□ 1.39
SMCO4-201ENST00000298966 OPLAHO14841 1288 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 NCLP19338 710 aaKnown RBP23.76■■□□□ 1.39
SMCO4-201ENST00000298966 CCND2P30279 289 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 SP2Q02086 613 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 HYAL1Q12794 435 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 PGM5Q15124 567 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 197.8 ms