RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 ANKS1AQ92625 1134 aa5.17□□□□□ -1.58
USP44-201ENST00000258499 CEP63Q96MT8 703 aa5.17□□□□□ -1.58
USP44-201ENST00000258499 JPH2Q9BR39 696 aaPredicted RBP5.17□□□□□ -1.58
USP44-201ENST00000258499 SH2D3AQ9BRG2 576 aa5.17□□□□□ -1.58
USP44-201ENST00000258499 DHX36Q9H2U1 1008 aaKnown RBP5.17□□□□□ -1.58
USP44-201ENST00000258499 TAF1DQ9H5J8 278 aaPredicted RBP5.17□□□□□ -1.58
USP44-201ENST00000258499 METTL14Q9HCE5 456 aaKnown RBP5.17□□□□□ -1.58
USP44-201ENST00000258499 HOMER2Q9NSB8 354 aa5.17□□□□□ -1.58
USP44-201ENST00000258499 DNAJC17Q9NVM6 304 aaKnown RBP5.17□□□□□ -1.58
USP44-201ENST00000258499 BAIAP2L1Q9UHR4 511 aa5.17□□□□□ -1.58
USP44-201ENST00000258499 SNX24Q9Y343 169 aa5.17□□□□□ -1.58
USP44-201ENST00000258499 ARFGEF2Q9Y6D5 1785 aa5.17□□□□□ -1.58
USP44-201ENST00000258499 DCCP43146 1447 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 RSPH10B2B2RC85 870 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 TTI1O43156 1089 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 KIF4AO95239 1232 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 RSPH10BP0C881 870 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 EEF2P13639 858 aaKnown RBP5.16□□□□□ -1.58
USP44-201ENST00000258499 KRT5P13647 590 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 NMT1P30419 496 aaKnown RBP5.16□□□□□ -1.58
USP44-201ENST00000258499 AARSP49588 968 aaKnown RBP eCLIP5.16□□□□□ -1.58
USP44-201ENST00000258499 CALCOCO2Q13137 446 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 MTMR3Q13615 1198 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 E2F5Q15329 346 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 GRIPAP1Q4V328 841 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 SEL1L2Q5TEA6 688 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 PHLDB2Q86SQ0 1253 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 CCDC50Q8IVM0 306 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 PPM1KQ8N3J5 372 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 ANKRD42Q8N9B4 389 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 AENQ8WTP8 325 aaKnown RBP5.16□□□□□ -1.58
USP44-201ENST00000258499 ATP6V1G3Q96LB4 118 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 FMO2Q99518 471 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 TRIM51Q9BSJ1 452 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 RTFDC1Q9BY42 306 aaPredicted RBP5.16□□□□□ -1.58
USP44-201ENST00000258499 FGFBP2Q9BYJ0 223 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 UBXN6Q9BZV1 441 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 GLT8D2Q9H1C3 349 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 EFCC1Q9HA90 598 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 TMOD4Q9NZQ9 345 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 SAMD15Q9P1V8 674 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 ASIC3Q9UHC3 531 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.16□□□□□ -1.58
USP44-201ENST00000258499 DAAM1Q9Y4D1 1078 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 BZW2Q9Y6E2 419 aaKnown RBP5.16□□□□□ -1.58
USP44-201ENST00000258499 CCDC169A6NNP5 214 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 MYO1FO00160 1098 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 FGRP09769 529 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 NAB2Q15742 525 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 GKAP1Q5VSY0 366 aaPredicted RBP5.16□□□□□ -1.58
USP44-201ENST00000258499 LRCH2Q5VUJ6 765 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 MMS22LQ6ZRQ5 1243 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 BICD1Q96G01 975 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 CCT8L2Q96SF2 557 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 NAP1L3Q99457 506 aaPredicted RBP5.16□□□□□ -1.58
USP44-201ENST00000258499 REEP2Q9BRK0 252 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 RAB17Q9H0T7 212 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 DNAJC12Q9UKB3 198 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 CD2APQ9Y5K6 639 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 NID2Q14112 1375 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 GPR75-ASB3A0A0A6YYF3 556 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 HMGB1P1B2RPK0 211 aaPredicted RBP5.16□□□□□ -1.58
USP44-201ENST00000258499 hCG_1984214I3L0E3 225 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 K7ENM7 598 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 MED24O75448 989 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 FERP16591 822 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 CYP11B2P19099 503 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 GBP2P32456 591 aaPredicted RBP5.16□□□□□ -1.58
USP44-201ENST00000258499 NF2P35240 595 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 PSMC2P35998 433 aaKnown RBP5.16□□□□□ -1.58
USP44-201ENST00000258499 CASP4P49662 377 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 PPP4CP60510 307 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 PSMC6P62333 389 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 ZC2HC1CQ53FD0 456 aaPredicted RBP5.16□□□□□ -1.58
USP44-201ENST00000258499 RBM26Q5T8P6 1007 aaKnown RBP5.16□□□□□ -1.58
USP44-201ENST00000258499 HOOK3Q86VS8 718 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 NLRP14Q86W24 1093 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 REM2Q8IYK8 340 aaPredicted RBP5.16□□□□□ -1.58
USP44-201ENST00000258499 UBL4BQ8N7F7 174 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 ZNF713Q8N859 430 aaPredicted RBP5.16□□□□□ -1.58
USP44-201ENST00000258499 SCFD1Q8WVM8 642 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 HOOK2Q96ED9 719 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 PBKQ96KB5 322 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 PLCD4Q9BRC7 762 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 TTYH3Q9C0H2 523 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 MTUS1Q9ULD2 1270 aa5.16□□□□□ -1.58
USP44-201ENST00000258499 GRID2IPA4D2P6 1211 aa5.15□□□□□ -1.58
USP44-201ENST00000258499 RASSF10A6NK89 507 aa5.15□□□□□ -1.58
USP44-201ENST00000258499 UBAP1LF5GYI3 381 aa5.15□□□□□ -1.58
USP44-201ENST00000258499 AGPSO00116 658 aa5.15□□□□□ -1.58
USP44-201ENST00000258499 ITGA4P13612 1032 aa5.15□□□□□ -1.58
USP44-201ENST00000258499 FECHP22830 423 aa5.15□□□□□ -1.58
USP44-201ENST00000258499 HDLBPQ00341 1268 aaKnown RBP5.15□□□□□ -1.58
USP44-201ENST00000258499 CDK17Q00537 523 aa5.15□□□□□ -1.58
USP44-201ENST00000258499 ACTN3Q08043 901 aaPredicted RBP5.15□□□□□ -1.58
USP44-201ENST00000258499 KCNMA1Q12791 1236 aa5.15□□□□□ -1.58
USP44-201ENST00000258499 SEMA3FQ13275 785 aa5.15□□□□□ -1.58
USP44-201ENST00000258499 SNX1Q13596 522 aa5.15□□□□□ -1.58
USP44-201ENST00000258499 DRAP1Q14919 205 aaPredicted RBP5.15□□□□□ -1.58
USP44-201ENST00000258499 SEPT7Q16181 437 aaKnown RBP5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms