RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 IQCF3P0C7M6 154 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 GNAT1P11488 350 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 ATP4AP20648 1035 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 GJB2P29033 226 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 ADAM17P78536 824 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 PPIGQ13427 754 aaKnown RBP eCLIP9.63□□□□□ -0.87
TMEM258-201ENST00000257262 BFSP2Q13515 415 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 PLCB4Q15147 1175 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 SAFBQ15424 915 aaKnown RBP eCLIP9.63□□□□□ -0.87
TMEM258-201ENST00000257262 TRIM71Q2Q1W2 868 aaKnown RBP9.63□□□□□ -0.87
TMEM258-201ENST00000257262 LRCH2Q5VUJ6 765 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 FAM160B1Q5W0V3 765 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 MIS18BP1Q6P0N0 1132 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 SERINC5Q86VE9 423 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 CCDC60Q8IWA6 550 aaPredicted RBP9.63□□□□□ -0.87
TMEM258-201ENST00000257262 SMAP1Q8IYB5 467 aaPredicted RBP9.63□□□□□ -0.87
TMEM258-201ENST00000257262 CCDC155Q8N6L0 562 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 ETNPPLQ8TBG4 499 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 AFAP1L1Q8TED9 768 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 NAP1L4Q99733 375 aaKnown RBP9.63□□□□□ -0.87
TMEM258-201ENST00000257262 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.63□□□□□ -0.87
TMEM258-201ENST00000257262 UNC45AQ9H3U1 944 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 IL23AQ9NPF7 189 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 ZNF302Q9NR11 478 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 TCEAL9Q9UHQ7 104 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 SAMM50Q9Y512 469 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 PCDHA10Q9Y5I2 948 aa9.63□□□□□ -0.87
TMEM258-201ENST00000257262 POTEB3A0JP26 581 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 RBAK-RBAKDNI3L0D1 243 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 WNT7AO00755 349 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 CHMP2AO43633 222 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 FGBP02675 491 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 CKBP12277 381 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 INSRRP14616 1297 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 GCFC2P16383 781 aaKnown RBP9.62□□□□□ -0.87
TMEM258-201ENST00000257262 SLC26A2P50443 739 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 IGBP1P78318 339 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 RBL2Q08999 1139 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 GRIK4Q16099 956 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 VARS2Q5ST30 1063 aaKnown RBP9.62□□□□□ -0.87
TMEM258-201ENST00000257262 TMEM240Q5SV17 173 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 MARCH8Q5T0T0 291 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 POTEBQ6S5H4 581 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 B3GNT9Q6UX72 402 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 ZNF365Q70YC5 407 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 DEFB128Q7Z7B8 93 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 RPUSD2Q8IZ73 545 aaKnown RBP9.62□□□□□ -0.87
TMEM258-201ENST00000257262 CAGE1Q8TC20 777 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 LMBR1Q8WVP7 490 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 HAS1Q92839 578 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 TNPO1Q92973 898 aaKnown RBP9.62□□□□□ -0.87
TMEM258-201ENST00000257262 VWCEQ96DN2 955 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 ZBTB10Q96DT7 871 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 FOXP1Q9H334 677 aaPredicted RBP9.62□□□□□ -0.87
TMEM258-201ENST00000257262 KCNMB3Q9NPA1 279 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 DISC1Q9NRI5 854 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 GABBR1Q9UBS5 961 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 SMC3Q9UQE7 1217 aa9.62□□□□□ -0.87
TMEM258-201ENST00000257262 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.62□□□□□ -0.87
TMEM258-201ENST00000257262 MAFBQ9Y5Q3 323 aaPredicted RBP9.62□□□□□ -0.87
TMEM258-201ENST00000257262 KAT6AQ92794 2004 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 RRN3P2A6NIE6 340 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 WDR64B1ANS9 1081 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 KIF28PB7ZC32 967 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 SOX1O00570 391 aaPredicted RBP9.61□□□□□ -0.87
TMEM258-201ENST00000257262 TBX3O15119 743 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 MARCH6O60337 910 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 BAG4O95429 457 aaKnown RBP9.61□□□□□ -0.87
TMEM258-201ENST00000257262 SELPP16109 830 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 ATP2B1P20020 1258 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 SFNP31947 248 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 THPOP40225 353 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 JAK3P52333 1124 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 PPFIA1Q13136 1202 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 CUL4AQ13619 759 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 GNL2Q13823 731 aaKnown RBP9.61□□□□□ -0.87
TMEM258-201ENST00000257262 GPNMBQ14956 572 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 LRIT3Q3SXY7 679 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 ZNF618Q5T7W0 954 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 PDXDC2PQ6P474 469 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 TRAF7Q6Q0C0 670 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 RUFY4Q6ZNE9 571 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 LRRC8DQ7L1W4 858 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 TRMT1LQ7Z2T5 733 aaKnown RBP9.61□□□□□ -0.87
TMEM258-201ENST00000257262 MIER3Q7Z3K6 550 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 PLPP6Q8IY26 295 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 TRAPPC12Q8WVT3 735 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 BBXQ8WY36 941 aaPredicted RBP9.61□□□□□ -0.87
TMEM258-201ENST00000257262 FAM20AQ96MK3 541 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 KIF3AQ9Y496 699 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 CEP290O15078 2479 aa9.61□□□□□ -0.87
TMEM258-201ENST00000257262 MYH9P35579 1960 aaKnown RBP9.61□□□□□ -0.87
TMEM258-201ENST00000257262 MBLAC1A4D2B0 266 aaPredicted RBP9.6□□□□□ -0.87
TMEM258-201ENST00000257262 RSPH10B2B2RC85 870 aa9.6□□□□□ -0.87
TMEM258-201ENST00000257262 EML1O00423 815 aa9.6□□□□□ -0.87
TMEM258-201ENST00000257262 HBP1O60381 514 aa9.6□□□□□ -0.87
TMEM258-201ENST00000257262 RSPH10BP0C881 870 aa9.6□□□□□ -0.87
TMEM258-201ENST00000257262 U2AF2P26368 475 aaKnown RBP eCLIP9.6□□□□□ -0.87
TMEM258-201ENST00000257262 RFC2P35250 354 aa9.6□□□□□ -0.87
TMEM258-201ENST00000257262 ZNF174Q15697 407 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms