RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 PRKCSHP14314 528 aaPredicted RBP14.7□□□□□ -0.06
SLIRP-201ENST00000238688 BMP6P22004 513 aa14.7□□□□□ -0.06
SLIRP-201ENST00000238688 RPS6P62753 249 aaKnown RBP14.7□□□□□ -0.06
SLIRP-201ENST00000238688 IRX5P78411 483 aaPredicted RBP14.7□□□□□ -0.06
SLIRP-201ENST00000238688 LRCH2Q5VUJ6 765 aa14.7□□□□□ -0.06
SLIRP-201ENST00000238688 CCSAPQ6IQ19 270 aaPredicted RBP14.7□□□□□ -0.06
SLIRP-201ENST00000238688 NSUN6Q8TEA1 469 aaKnown RBP14.7□□□□□ -0.06
SLIRP-201ENST00000238688 ERCC4Q92889 916 aaPredicted RBP14.7□□□□□ -0.06
SLIRP-201ENST00000238688 GPRASP2Q96D09 838 aa14.7□□□□□ -0.06
SLIRP-201ENST00000238688 MPHOSPH6Q99547 160 aaKnown RBP14.7□□□□□ -0.06
SLIRP-201ENST00000238688 A1CFQ9NQ94 594 aaKnown RBP14.7□□□□□ -0.06
SLIRP-201ENST00000238688 XPNPEP3Q9NQH7 507 aa14.7□□□□□ -0.06
SLIRP-201ENST00000238688 HOMER2Q9NSB8 354 aa14.7□□□□□ -0.06
SLIRP-201ENST00000238688 BLOC1S4Q9NUP1 217 aa14.7□□□□□ -0.06
SLIRP-201ENST00000238688 EXOC1Q9NV70 894 aa14.7□□□□□ -0.06
SLIRP-201ENST00000238688 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.7□□□□□ -0.06
SLIRP-201ENST00000238688 UBIAD1Q9Y5Z9 338 aa14.7□□□□□ -0.06
SLIRP-201ENST00000238688 SYNRGQ9UMZ2 1314 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 KIAA1217Q5T5P2 1943 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 SOWAHBA6NEL2 793 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 KBTBD13C9JR72 458 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 GAS7O60861 476 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 RARBP10826 455 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 AKR1A1P14550 325 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 CCND2P30279 289 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 CDC25AP30304 524 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 GSDMDP57764 484 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 PAK1Q13153 545 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 MUM1L1Q5H9M0 696 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 C1orf53Q5VUE5 145 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 NLRX1Q86UT6 975 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 ZSCAN30Q86W11 494 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 ANKRD35Q8N283 1001 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 KLHDC9Q8NEP7 349 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 ANKRD20A12PQ8NF67 263 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 PNMA5Q96PV4 448 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 TEKT3Q9BXF9 490 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 JADE2Q9NQC1 790 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 PXMP2Q9NR77 195 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 TCEAL9Q9UHQ7 104 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 DNM3Q9UQ16 869 aa14.69□□□□□ -0.06
SLIRP-201ENST00000238688 MYADML2A6NDP7 307 aa14.68□□□□□ -0.06
SLIRP-201ENST00000238688 IPO5O00410 1097 aaKnown RBP14.68□□□□□ -0.06
SLIRP-201ENST00000238688 KLRC4O43908 158 aa14.68□□□□□ -0.06
SLIRP-201ENST00000238688 ZNF18P17022 549 aa14.68□□□□□ -0.06
SLIRP-201ENST00000238688 SFNP31947 248 aa14.68□□□□□ -0.06
SLIRP-201ENST00000238688 ASIC1P78348 528 aa14.68□□□□□ -0.06
SLIRP-201ENST00000238688 ACVR2BQ13705 512 aa14.68□□□□□ -0.06
SLIRP-201ENST00000238688 EPHA7Q15375 998 aa14.68□□□□□ -0.06
SLIRP-201ENST00000238688 TRIM60Q495X7 471 aa14.68□□□□□ -0.06
SLIRP-201ENST00000238688 B3GNT9Q6UX72 402 aa14.68□□□□□ -0.06
SLIRP-201ENST00000238688 ARMCX2Q7L311 632 aa14.68□□□□□ -0.06
SLIRP-201ENST00000238688 GRAMD1CQ8IYS0 662 aa14.68□□□□□ -0.06
SLIRP-201ENST00000238688 RMDN3Q96TC7 470 aa14.68□□□□□ -0.06
SLIRP-201ENST00000238688 PDCD2LQ9BRP1 358 aa14.68□□□□□ -0.06
SLIRP-201ENST00000238688 ZNF577Q9BSK1 485 aa14.68□□□□□ -0.06
SLIRP-201ENST00000238688 WDR81Q562E7 1941 aa14.68□□□□□ -0.06
SLIRP-201ENST00000238688 PPP1R3GB7ZBB8 358 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 DKC1O60832 514 aaKnown RBP eCLIP14.67□□□□□ -0.06
SLIRP-201ENST00000238688 FGFR1OPO95684 399 aaKnown RBP14.67□□□□□ -0.06
SLIRP-201ENST00000238688 MYCNP04198 464 aaPredicted RBP14.67□□□□□ -0.06
SLIRP-201ENST00000238688 JAK3P52333 1124 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 PLCB2Q00722 1185 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 KRT76Q01546 638 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 PGM5Q15124 567 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 LRIT3Q3SXY7 679 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 GNPTABQ3T906 1256 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 KMT5BQ4FZB7 885 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 ARHGEF16Q5VV41 709 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 VSIG10LQ86VR7 867 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 FAM114A1Q8IWE2 563 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 CCDC65Q8IXS2 484 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 TDHQ8IZJ6 230 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 ADSSL1Q8N142 457 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 PURBQ96QR8 312 aaKnown RBP14.67□□□□□ -0.06
SLIRP-201ENST00000238688 HSD17B14Q9BPX1 270 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 UBE2OQ9C0C9 1292 aaKnown RBP14.67□□□□□ -0.06
SLIRP-201ENST00000238688 ABHD16BQ9H3Z7 469 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 ADD3Q9UEY8 706 aaKnown RBP14.67□□□□□ -0.06
SLIRP-201ENST00000238688 ZHX1Q9UKY1 873 aaPredicted RBP14.67□□□□□ -0.06
SLIRP-201ENST00000238688 FAM184BQ9ULE4 1060 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 ATP11BQ9Y2G3 1177 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 NFE2L3Q9Y4A8 694 aa14.67□□□□□ -0.06
SLIRP-201ENST00000238688 A0A1W2PQ45 241 aaPredicted RBP14.66□□□□□ -0.06
SLIRP-201ENST00000238688 A0A1W2PQY0 241 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 FRMD3A2A2Y4 597 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 TRIM43BA6NCK2 446 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 POTEB2H3BUK9 544 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 NRDCO43847 1150 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 DUSP11O75319 330 aaKnown RBP14.66□□□□□ -0.06
SLIRP-201ENST00000238688 LYPLA2O95372 231 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 EYA4O95677 639 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 EHHADHQ08426 723 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 MTMR1Q13613 665 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 CCDC144BQ3MJ40 725 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 NCAPH2Q6IBW4 605 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 RNF180Q86T96 592 aa14.66□□□□□ -0.06
SLIRP-201ENST00000238688 GUF1Q8N442 669 aaKnown RBP14.66□□□□□ -0.06
SLIRP-201ENST00000238688 SYT2Q8N9I0 419 aaPredicted RBP14.66□□□□□ -0.06
SLIRP-201ENST00000238688 TBC1D5Q92609 795 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms