RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 MAP3K20Q9NYL2 800 aaKnown RBP9.66□□□□□ -0.86
IFT43-201ENST00000238628 USP18Q9UMW8 372 aa9.66□□□□□ -0.86
IFT43-201ENST00000238628 MRPL42Q9Y6G3 142 aaKnown RBP9.66□□□□□ -0.86
IFT43-201ENST00000238628 SETXQ7Z333 2677 aaKnown RBP9.65□□□□□ -0.86
IFT43-201ENST00000238628 SMIM10L2AP0DMW4 78 aa9.65□□□□□ -0.86
IFT43-201ENST00000238628 SMIM10L2BP0DMW5 78 aa9.65□□□□□ -0.86
IFT43-201ENST00000238628 HOXB8P17481 243 aaPredicted RBP9.65□□□□□ -0.86
IFT43-201ENST00000238628 NT5C2P49902 561 aa9.65□□□□□ -0.86
IFT43-201ENST00000238628 PGM5Q15124 567 aa9.65□□□□□ -0.86
IFT43-201ENST00000238628 LLGL2Q6P1M3 1020 aa9.65□□□□□ -0.86
IFT43-201ENST00000238628 TMEM184AQ6ZMB5 413 aa9.65□□□□□ -0.86
IFT43-201ENST00000238628 STOX1Q6ZVD7 989 aa9.65□□□□□ -0.86
IFT43-201ENST00000238628 ZDHHC14Q8IZN3 488 aa9.65□□□□□ -0.86
IFT43-201ENST00000238628 PLCD3Q8N3E9 789 aa9.65□□□□□ -0.86
IFT43-201ENST00000238628 SAMD3Q8N6K7 520 aa9.65□□□□□ -0.86
IFT43-201ENST00000238628 TDRD5Q8NAT2 981 aaKnown RBP9.65□□□□□ -0.86
IFT43-201ENST00000238628 RILPL2Q969X0 211 aa9.65□□□□□ -0.86
IFT43-201ENST00000238628 NECTIN4Q96NY8 510 aa9.65□□□□□ -0.86
IFT43-201ENST00000238628 CDH22Q9UJ99 828 aa9.65□□□□□ -0.86
IFT43-201ENST00000238628 DOCK5Q9H7D0 1870 aa9.65□□□□□ -0.86
IFT43-201ENST00000238628 ZFYVE26Q68DK2 2539 aa9.64□□□□□ -0.87
IFT43-201ENST00000238628 B4E1Z4 1266 aa9.64□□□□□ -0.87
IFT43-201ENST00000238628 OPLAHO14841 1288 aa9.64□□□□□ -0.87
IFT43-201ENST00000238628 CAND2O75155 1236 aa9.64□□□□□ -0.87
IFT43-201ENST00000238628 DGKIO75912 1065 aa9.64□□□□□ -0.87
IFT43-201ENST00000238628 LGALS2P05162 132 aa9.64□□□□□ -0.87
IFT43-201ENST00000238628 GNAT1P11488 350 aa9.64□□□□□ -0.87
IFT43-201ENST00000238628 UBA1P22314 1058 aaKnown RBP9.64□□□□□ -0.87
IFT43-201ENST00000238628 CCND2P30279 289 aa9.64□□□□□ -0.87
IFT43-201ENST00000238628 HOXA13P31271 388 aaPredicted RBP9.64□□□□□ -0.87
IFT43-201ENST00000238628 GHRHRQ02643 423 aa9.64□□□□□ -0.87
IFT43-201ENST00000238628 TBC1D8BQ0IIM8 1120 aa9.64□□□□□ -0.87
IFT43-201ENST00000238628 TPRNQ4KMQ1 711 aa9.64□□□□□ -0.87
IFT43-201ENST00000238628 SPECC1Q5M775 1068 aa9.64□□□□□ -0.87
IFT43-201ENST00000238628 STAG2Q8N3U4 1231 aa9.64□□□□□ -0.87
IFT43-201ENST00000238628 ENAHQ8N8S7 591 aaPredicted RBP9.64□□□□□ -0.87
IFT43-201ENST00000238628 GPKOWQ92917 476 aaPredicted RBP eCLIP9.64□□□□□ -0.87
IFT43-201ENST00000238628 USP26Q9BXU7 913 aa9.64□□□□□ -0.87
IFT43-201ENST00000238628 SETD4Q9NVD3 440 aa9.64□□□□□ -0.87
IFT43-201ENST00000238628 ZSWIM5Q9P217 1185 aa9.64□□□□□ -0.87
IFT43-201ENST00000238628 PCDHA1Q9Y5I3 950 aa9.64□□□□□ -0.87
IFT43-201ENST00000238628 BAZ2BQ9UIF8 2168 aaKnown RBP9.64□□□□□ -0.87
IFT43-201ENST00000238628 KLRF2D3W0D1 207 aa9.63□□□□□ -0.87
IFT43-201ENST00000238628 NOP56O00567 594 aaKnown RBP9.63□□□□□ -0.87
IFT43-201ENST00000238628 ENPP3O14638 875 aa9.63□□□□□ -0.87
IFT43-201ENST00000238628 ZBTB5O15062 677 aa9.63□□□□□ -0.87
IFT43-201ENST00000238628 ZIC2O95409 532 aaPredicted RBP9.63□□□□□ -0.87
IFT43-201ENST00000238628 PROS1P07225 676 aa9.63□□□□□ -0.87
IFT43-201ENST00000238628 SDSP20132 328 aa9.63□□□□□ -0.87
IFT43-201ENST00000238628 HOXC8P31273 242 aa9.63□□□□□ -0.87
IFT43-201ENST00000238628 PAN2Q504Q3 1202 aaKnown RBP9.63□□□□□ -0.87
IFT43-201ENST00000238628 FCHSD1Q86WN1 690 aa9.63□□□□□ -0.87
IFT43-201ENST00000238628 CMTR2Q8IYT2 770 aaKnown RBP9.63□□□□□ -0.87
IFT43-201ENST00000238628 IL31RAQ8NI17 732 aa9.63□□□□□ -0.87
IFT43-201ENST00000238628 BCAS3Q9H6U6 928 aa9.63□□□□□ -0.87
IFT43-201ENST00000238628 FANCMQ8IYD8 2048 aa9.63□□□□□ -0.87
IFT43-201ENST00000238628 FLNBO75369 2602 aaKnown RBP9.63□□□□□ -0.87
IFT43-201ENST00000238628 GCOM1H8Y6P7 765 aaPredicted RBP9.62□□□□□ -0.87
IFT43-201ENST00000238628 PPP1R11O60927 126 aaPredicted RBP9.62□□□□□ -0.87
IFT43-201ENST00000238628 POLR2MP0CAP2 368 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 MTHFRP42898 656 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 ERVFC1P60507 584 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 UBE3AQ05086 875 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 ITIH3Q06033 890 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 TRAF1Q13077 416 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 TDGQ13569 410 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 KCNC3Q14003 757 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 NEDD9Q14511 834 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 IMMTQ16891 758 aaKnown RBP9.62□□□□□ -0.87
IFT43-201ENST00000238628 GNPTABQ3T906 1256 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 FAM26DQ5JW98 314 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 SPOUT1Q5T280 376 aaKnown RBP9.62□□□□□ -0.87
IFT43-201ENST00000238628 IFIT1BQ5T764 474 aaKnown RBP9.62□□□□□ -0.87
IFT43-201ENST00000238628 UTP14CQ5TAP6 766 aaKnown RBP9.62□□□□□ -0.87
IFT43-201ENST00000238628 PDE12Q6L8Q7 609 aaKnown RBP9.62□□□□□ -0.87
IFT43-201ENST00000238628 CWC27Q6UX04 472 aaKnown RBP9.62□□□□□ -0.87
IFT43-201ENST00000238628 CYFIP1Q7L576 1253 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 C1orf210Q8IVY1 113 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 MTMR8Q96EF0 704 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 UBAC1Q9BSL1 405 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 KRT23Q9C075 422 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 ADAM7Q9H2U9 754 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 CYP26B1Q9NR63 512 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 RTEL1Q9NZ71 1219 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 DBR1Q9UK59 544 aaKnown RBP9.62□□□□□ -0.87
IFT43-201ENST00000238628 ZMIZ1Q9ULJ6 1067 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 PCDHB12Q9Y5F1 795 aa9.62□□□□□ -0.87
IFT43-201ENST00000238628 LAMA4Q16363 1823 aa9.61□□□□□ -0.87
IFT43-201ENST00000238628 SPATA31C2B4DYI2 1134 aa9.61□□□□□ -0.87
IFT43-201ENST00000238628 CHRNA1P02708 482 aa9.61□□□□□ -0.87
IFT43-201ENST00000238628 DCNP07585 359 aaKnown RBP9.61□□□□□ -0.87
IFT43-201ENST00000238628 WEE2P0C1S8 567 aa9.61□□□□□ -0.87
IFT43-201ENST00000238628 ARHGAP4P98171 946 aa9.61□□□□□ -0.87
IFT43-201ENST00000238628 PLPP4Q5VZY2 271 aa9.61□□□□□ -0.87
IFT43-201ENST00000238628 METTL7BQ6UX53 244 aa9.61□□□□□ -0.87
IFT43-201ENST00000238628 RUFY4Q6ZNE9 571 aa9.61□□□□□ -0.87
IFT43-201ENST00000238628 HOMER1Q86YM7 354 aa9.61□□□□□ -0.87
IFT43-201ENST00000238628 CASP10Q92851 521 aa9.61□□□□□ -0.87
IFT43-201ENST00000238628 BORCS6Q96GS4 357 aa9.61□□□□□ -0.87
IFT43-201ENST00000238628 PIGSQ96S52 555 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms