RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 ATP1A2P50993 1020 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 AGBL3Q8NEM8 1001 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 NEDD1Q8NHV4 660 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 CDK5RAP2Q96SN8 1893 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 CCDC188H7C350 402 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 FAM153BP0C7A2 387 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 PRELPP51888 382 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 GFPT1Q06210 699 aaPredicted RBP17.44■□□□□ 0.38
SF3A2-201ENST00000221494 PDIA5Q14554 519 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 FAM153CQ494X1 144 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 CCDC40Q4G0X9 1142 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 HEATR3Q7Z4Q2 680 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 ACTRT1Q8TDG2 376 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 TAF4BQ92750 862 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 AIPL1Q9NZN9 384 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 FAM153AQ9UHL3 310 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 SERPINB13Q9UIV8 391 aa17.44■□□□□ 0.38
SF3A2-201ENST00000221494 MYH4Q9Y623 1939 aa17.43■□□□□ 0.38
SF3A2-201ENST00000221494 SPDYE2BA6NHP3 402 aa17.43■□□□□ 0.38
SF3A2-201ENST00000221494 PALMO75781 387 aa17.43■□□□□ 0.38
SF3A2-201ENST00000221494 SPDYE6P0CI01 402 aa17.43■□□□□ 0.38
SF3A2-201ENST00000221494 CDR1P51861 262 aa17.43■□□□□ 0.38
SF3A2-201ENST00000221494 FKBP3Q00688 224 aaKnown RBP17.43■□□□□ 0.38
SF3A2-201ENST00000221494 GUCY1A3Q02108 690 aa17.43■□□□□ 0.38
SF3A2-201ENST00000221494 IFFO1Q0D2I5 559 aa17.43■□□□□ 0.38
SF3A2-201ENST00000221494 NEDD9Q14511 834 aa17.43■□□□□ 0.38
SF3A2-201ENST00000221494 TMEM266Q2M3C6 531 aa17.43■□□□□ 0.38
SF3A2-201ENST00000221494 PREPLQ4J6C6 727 aaPredicted RBP17.43■□□□□ 0.38
SF3A2-201ENST00000221494 TDRD12Q587J7 1177 aaKnown RBP17.43■□□□□ 0.38
SF3A2-201ENST00000221494 OGFOD1Q8N543 542 aa17.43■□□□□ 0.38
SF3A2-201ENST00000221494 LARP4BQ92615 738 aaKnown RBP17.43■□□□□ 0.38
SF3A2-201ENST00000221494 PLIN2Q99541 437 aa17.43■□□□□ 0.38
SF3A2-201ENST00000221494 KLC4Q9NSK0 619 aa17.43■□□□□ 0.38
SF3A2-201ENST00000221494 HDAC9Q9UKV0 1011 aa17.43■□□□□ 0.38
SF3A2-201ENST00000221494 PLAAQ9Y263 795 aa17.43■□□□□ 0.38
SF3A2-201ENST00000221494 COL4A3BPQ9Y5P4 624 aa17.43■□□□□ 0.38
SF3A2-201ENST00000221494 GMNCA6NCL1 334 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 TCP10Q12799 353 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 ZCWPW2Q504Y3 356 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 LACTB2Q53H82 288 aaPredicted RBP17.42■□□□□ 0.38
SF3A2-201ENST00000221494 KCTD16Q68DU8 428 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 TTC19Q6DKK2 380 aaPredicted RBP17.42■□□□□ 0.38
SF3A2-201ENST00000221494 CIAPIN1Q6FI81 312 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 CCDC121Q6ZUS5 278 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 SH3BP5LQ7L8J4 393 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 EGFL6Q8IUX8 553 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 SCFD2Q8WU76 684 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 IFT81Q8WYA0 676 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 CYFIP2Q96F07 1278 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 KRT12Q99456 494 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 DHX36Q9H2U1 1008 aaKnown RBP17.42■□□□□ 0.38
SF3A2-201ENST00000221494 SLC39A2Q9NP94 309 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 BLOC1S4Q9NUP1 217 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 SLC12A6Q9UHW9 1150 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 BZW2Q9Y6E2 419 aaKnown RBP17.42■□□□□ 0.38
SF3A2-201ENST00000221494 MYH7BA7E2Y1 1941 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 DDTLA6NHG4 134 aaPredicted RBP17.42■□□□□ 0.38
SF3A2-201ENST00000221494 CCNT1O60563 726 aaKnown RBP17.42■□□□□ 0.38
SF3A2-201ENST00000221494 KCNMA1Q12791 1236 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 GRB10Q13322 594 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 CEP85LQ5SZL2 805 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 WLSQ5T9L3 541 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 CCDC13Q8IYE1 715 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 STAG2Q8N3U4 1231 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 MS4A14Q96JA4 679 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 SMARCAL1Q9NZC9 954 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 EHD2Q9NZN4 543 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 SWAP70Q9UH65 585 aa17.42■□□□□ 0.38
SF3A2-201ENST00000221494 MYMKA6NI61 221 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 H0YGN5 161 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 TRAPPC3O43617 180 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 HLA-DOAP06340 250 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 GHRP10912 638 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 SHMT1P34896 483 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 NOVP48745 357 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 USP11P51784 963 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 DLGAP5Q15398 846 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 FAM83BQ5T0W9 1011 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 MAATS1Q7Z4T9 603 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 RAD54LQ92698 747 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 CDK5RAP3Q96JB5 506 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 MTMR9Q96QG7 549 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 PSMB7Q99436 277 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 SLITRK6Q9H5Y7 841 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 NFS1Q9Y697 457 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 FER1L6Q2WGJ9 1857 aa17.41■□□□□ 0.38
SF3A2-201ENST00000221494 FOCADQ5VW36 1801 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 LOC102724159A0A0B4J2E5 919 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 MYO1FO00160 1098 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 RAD51CO43502 376 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 BUB1O43683 1085 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 CYTH3O43739 400 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 ENTPD3O75355 529 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 PWP2Q15269 919 aaKnown RBP17.4■□□□□ 0.38
SF3A2-201ENST00000221494 RPS6KA1Q15418 735 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 LETM2Q2VYF4 491 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 TMEM119Q4V9L6 283 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 ZC3H3Q8IXZ2 948 aaKnown RBP17.4■□□□□ 0.38
SF3A2-201ENST00000221494 MYOCDQ8IZQ8 938 aa17.4■□□□□ 0.38
SF3A2-201ENST00000221494 MTMR14Q8NCE2 650 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms