RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 MRRFQ96E11 262 aaKnown RBP11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 LXNQ9BS40 222 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 SLC38A10Q9HBR0 1119 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 POLLQ9UGP5 575 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 ZNF609O15014 1411 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 BAATQ14032 418 aaPredicted RBP11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 TTBK2Q6IQ55 1244 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 OXER1Q8TDS5 423 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 SEPT10Q9P0V9 454 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 PPLO60437 1756 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 PVALEFA0A1B0GWK0 134 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 BUB1O43683 1085 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 LRRN2O75325 713 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 CD58P19256 250 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 ZNF653Q96CK0 615 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 MTIF3Q9H2K0 278 aaKnown RBP11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 RASA1P20936 1047 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 XPAP23025 273 aaPredicted RBP11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 MTMR3Q13615 1198 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 PRPSAP1Q14558 356 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 OR6B3Q8NGW1 331 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 CARD6Q9BX69 1037 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 PPP2R3BQ9Y5P8 575 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 REREQ9P2R6 1566 aa11.23□□□□□ -0.61
NIPAL3-201ENST00000003912 KRIT1O00522 736 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 STAT5BP51692 787 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 SFR1Q86XK3 245 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 XXYLT1Q8NBI6 393 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 CPSF3Q9UKF6 684 aaKnown RBP11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 PRR12Q9ULL5 1215 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 BCL9O00512 1426 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 E9PMD0 336 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 TCP1P17987 556 aaKnown RBP11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 CASP14P31944 242 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 IRX5P78411 483 aaPredicted RBP11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 DNAJC24Q6P3W2 148 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 SRBD1Q8N5C6 995 aaKnown RBP11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 SMC1BQ8NDV3 1235 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 MRPL4Q9BYD3 311 aaKnown RBP11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 POLR3FQ9H1D9 316 aaPredicted RBP11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 EIF3CLB5ME19 914 aaKnown RBP11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 GH1P01241 217 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 KYAT1Q16773 422 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 CPLX4Q7Z7G2 160 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 P3H4Q92791 437 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 EIF3CQ99613 913 aaKnown RBP11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 VPS33BQ9H267 617 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 GJB4Q9NTQ9 266 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 POTEB3A0JP26 581 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 POTECB2RU33 542 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 TBC1D8O95759 1140 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 MAPK4P31152 587 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 GTF2F1P35269 517 aaKnown RBP eCLIP11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 OR6B2Q6IFH4 312 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 POTEBQ6S5H4 581 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 ELMOD1Q8N336 334 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 NUDT12Q9BQG2 462 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 GOLGA8SH3BPF8 625 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 SLC16A4O15374 487 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 HUS1O60921 280 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 VEGFAP15692 232 aaPredicted RBP11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 CYP2B6P20813 491 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 WHAMMP3Q1A5X7 153 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 SCARA5Q6ZMJ2 495 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 RUFY4Q6ZNE9 571 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 ZDHHC15Q96MV8 337 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 VPS37BQ9H9H4 285 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 SAMD15Q9P1V8 674 aa11.22□□□□□ -0.61
NIPAL3-201ENST00000003912 SPDYE16A6NNV3 312 aaPredicted RBP11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 TDP2O95551 362 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 CIITAP33076 1130 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 ARL4AP40617 200 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 TSPY1Q01534 308 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 SPDYE2Q495Y8 402 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 PALM2Q8IXS6 379 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 ATP2A3Q93084 1043 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 EIF2AK1Q9BQI3 630 aaKnown RBP11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 PPP2R2CQ9Y2T4 447 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 H7C0C1 242 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 KRT10P13645 584 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 ADCY8P40145 1251 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 ATP5OP48047 213 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 FCGRTP55899 365 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 MESDQ14696 234 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 PROM2Q8N271 834 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 BBOF1Q8ND07 529 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 CEP63Q96MT8 703 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 DESI2Q9BSY9 194 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 NDST4Q9H3R1 872 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 TUFT1Q9NNX1 390 aa11.21□□□□□ -0.61
NIPAL3-201ENST00000003912 MROH2AA6NES4 1674 aa11.21□□□□□ -0.62
NIPAL3-201ENST00000003912 GGPS1O95749 300 aa11.21□□□□□ -0.62
NIPAL3-201ENST00000003912 GPC3P51654 580 aa11.21□□□□□ -0.62
NIPAL3-201ENST00000003912 EFNA5P52803 228 aa11.21□□□□□ -0.62
NIPAL3-201ENST00000003912 EXOSC10Q01780 885 aaKnown RBP11.21□□□□□ -0.62
NIPAL3-201ENST00000003912 LMNB2Q03252 620 aa11.21□□□□□ -0.62
NIPAL3-201ENST00000003912 RFX6Q8HWS3 928 aa11.21□□□□□ -0.62
NIPAL3-201ENST00000003912 FAM76AQ8TAV0 307 aa11.21□□□□□ -0.62
NIPAL3-201ENST00000003912 RUNDC3BQ96NL0 473 aa11.21□□□□□ -0.62
NIPAL3-201ENST00000003912 SMARCAD1Q9H4L7 1026 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms