RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Ascc2Q91WR3 749 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Bag2Q91YN9 210 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cog2Q921L5 731 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Plagl2Q925T4 496 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Krt82Q99M74 516 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Fgfr1op2Q9CRA9 253 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cwc25Q9DBF7 416 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 ArcQ9WV31 396 aa10.53□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 BcorQ8CGN4 1759 aa10.52□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Gm10479K7N6H4 105 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Magea6O89010 325 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Tbc1d10aP58802 500 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Hspd1P63038 573 aaKnown RBP10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Stmn4P63042 189 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Rnf10Q3UIW5 804 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Gstt2Q61133 244 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Pick1Q62083 416 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Plk4Q64702 925 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Fam107aQ78TU8 144 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ttc7aQ8BGB2 858 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Eno4Q8C042 619 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Krt25Q8VCW2 446 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Rprd1aQ8VDS4 312 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Pcdhb12Q91Y07 789 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Chmp3Q9CQ10 224 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Echdc1Q9D9V3 322 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ift43Q9DA69 206 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Eif3fQ9DCH4 361 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Hic2Q9JLZ6 619 aaKnown RBP10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Dlg5E9Q9R9 1921 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Zfyve9A2A8R0 1397 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Patl2A2ARM1 529 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 NumblO08919 604 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Jarid2Q62315 1234 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Arhgap30Q640N3 1101 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ubxn7Q6P5G6 467 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ckap2lQ7TS74 745 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Zbtb24Q80X44 710 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Rccd1Q8BTU7 377 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Tmem63cQ8CBX0 802 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Znf830Q8R1N0 363 aaKnown RBP10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Lpin2Q99PI5 893 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ubxn8Q9QZ49 277 aa10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 PygmQ9WUB3 842 aaKnown RBP10.52□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Samd15F6XZJ7 620 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Palb2Q3U0P1 1104 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Mettl14Q3UIK4 456 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Znf583Q3V080 568 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Anks6Q6GQX6 883 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Zdhhc24Q6IR37 284 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Tbc1d10bQ8BHL3 798 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ipo5Q8BKC5 1097 aaKnown RBP10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Tubgcp5Q8BKN5 1024 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 PdhxQ8BKZ9 501 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Sh3rf3Q8C120 878 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Fate1Q8CEK7 99 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Efcab2Q9CQ46 164 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Rex1bdQ9CYZ6 169 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Rexo2Q9D8S4 237 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ube4bQ9ES00 1173 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Sept6Q9R1T4 434 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Myh8P13542 1937 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Slit3Q9WVB4 1523 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Zfp362B1ASA5 418 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Clk4O35493 481 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Cdh16O88338 830 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 PparaP23204 468 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Taok1Q5F2E8 1001 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Foxd4Q60688 444 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Map3k7Q62073 579 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Nr6a1Q64249 495 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Slain1Q68FF7 579 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Snx14Q8BHY8 964 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Golim4Q8BXA1 655 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Paip2bQ91W45 136 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Prmt3Q922H1 532 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Sntg2Q925E0 539 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Gimap3Q99MI6 301 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Gpihbp1Q9D1N2 228 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Bcl9lQ67FY2 1494 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Topaz1E5FYH1 1653 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Slit1Q80TR4 1531 aa10.51□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Gnat2P50149 354 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Bend4P86174 541 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 AcadsQ07417 412 aaKnown RBP10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 DbnlQ62418 436 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ece2Q80Z60 881 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Ppp1r12bQ8BG95 976 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 L3mbtl3Q8BLB7 883 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 4930504O13RikQ8C5Z9 145 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Pacs1Q8K212 961 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Q8K2W9 541 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Dctn2Q99KJ8 402 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Lrrc57Q9D1G5 239 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Spata17Q9D552 379 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Actrt1Q9D9J3 376 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Nwd2Q6P5U7 1742 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Atp10bB1AWN4 1474 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Gm2012B1B0R1 212 aa10.5□□□□□ -0.73
Hmgb1-201ENSMUST00000085546 Gm20509G3UZF1 325 aa10.5□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms