RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Fam178bQ24JP3 464 aa14.65□□□□□ -0.06
Nup88-201ENSMUST00000035283 Tnfaip8l3Q3TBL6 204 aa14.65□□□□□ -0.06
Nup88-201ENSMUST00000035283 Ehbp1Q69ZW3 1231 aa14.65□□□□□ -0.06
Nup88-201ENSMUST00000035283 DaglaQ6WQJ1 1044 aa14.65□□□□□ -0.06
Nup88-201ENSMUST00000035283 Pym1Q8CHP5 203 aaKnown RBP14.65□□□□□ -0.06
Nup88-201ENSMUST00000035283 4930449I24RikQ9D5E3 319 aa14.65□□□□□ -0.06
Nup88-201ENSMUST00000035283 Pex11aQ9Z211 246 aa14.65□□□□□ -0.06
Nup88-201ENSMUST00000035283 Dnai2A2AC93 623 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Trappc11B2RXC1 1133 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Apol10bG3X9K7 334 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 AurkbO70126 345 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Grem2O88273 168 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 CraddO88843 199 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Chmp6P0C0A3 200 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Xrcc6P23475 608 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Sept2P42208 361 aaKnown RBP14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Fdx1P46656 188 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Zc3h18Q0P678 948 aaKnown RBP14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Tex35Q14BK3 207 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Kctd1Q5M956 257 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Fgd5Q80UZ0 1219 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Dpp8Q80YA7 892 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Fam228aQ8CDW1 299 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Scyl2Q8CFE4 930 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Slc5a4bQ91ZP4 660 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Psrc1Q9D0P7 329 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Mrpl12Q9DB15 201 aaKnown RBP14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Inpp4aQ9EPW0 939 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Fmnl1Q9JL26 1094 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Gys1Q9Z1E4 738 aaKnown RBP14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Nfs1Q9Z1J3 459 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 TicrrQ8BQ33 1889 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Mms22lB1AUR6 1238 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Gsg1l2M0QWL6 290 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Ap1b1O35643 943 aaKnown RBP14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Psmc2P46471 433 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Pcif1P59114 706 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 MlxipQ2VPU4 917 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Rasip1Q3U0S6 961 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Abl2Q4JIM5 1182 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Six2Q62232 296 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Galnt17Q7TT15 598 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Cnot10Q8BH15 744 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Synpo2Q91YE8 1087 aaKnown RBP14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 RtcbQ99LF4 505 aaKnown RBP14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 CactinQ9CS00 772 aaKnown RBP14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Cdc42ep4Q9JM96 349 aaKnown RBP14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Gfpt2Q9Z2Z9 682 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Slfn14V9GXG1 899 aa14.64□□□□□ -0.07
Nup88-201ENSMUST00000035283 Flt1P35969 1333 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Zfp984A2A7A2 547 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Sema4dO09126 861 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Fam207aP58468 219 aaKnown RBP14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 EgfrQ01279 1210 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Pja2Q80U04 707 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Acad11Q80XL6 779 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 PolrmtQ8BKF1 1207 aaKnown RBP14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Usp20Q8C6M1 916 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Tbx22Q8K402 517 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Nup58Q8R332 587 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Rbm5Q91YE7 815 aaKnown RBP14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Dph5Q9CWQ0 281 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Acsl3Q9CZW4 720 aaKnown RBP14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Edf1Q9JMG1 148 aaKnown RBP14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Cacna2d3Q9Z1L5 1091 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Heg1E9Q7X6 1337 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Tex13c2A0A0G2JGA3 530 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 H2afzP0C0S6 128 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Atp6v1aP50516 617 aaKnown RBP14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 H2afvQ3THW5 128 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Cracr2aQ3UP38 310 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Epha7Q61772 998 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Cep104Q80V31 926 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Cul5Q9D5V5 780 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Tlr9Q9EQU3 1032 aa14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 PlekQ9JHK5 350 aaKnown RBP14.63□□□□□ -0.07
Nup88-201ENSMUST00000035283 Ltn1Q6A009 1767 aa14.62□□□□□ -0.07
Nup88-201ENSMUST00000035283 Psmd1Q3TXS7 953 aa14.62□□□□□ -0.07
Nup88-201ENSMUST00000035283 Tatdn3Q3U1C6 294 aa14.62□□□□□ -0.07
Nup88-201ENSMUST00000035283 HnrnpdQ60668 355 aaKnown RBP14.62□□□□□ -0.07
Nup88-201ENSMUST00000035283 Arid3aQ62431 601 aa14.62□□□□□ -0.07
Nup88-201ENSMUST00000035283 Haus6Q6NV99 933 aaKnown RBP14.62□□□□□ -0.07
Nup88-201ENSMUST00000035283 Q6PD19 689 aa14.62□□□□□ -0.07
Nup88-201ENSMUST00000035283 Ccdc25Q78PG9 208 aa14.62□□□□□ -0.07
Nup88-201ENSMUST00000035283 Rint1Q8BZ36 792 aa14.62□□□□□ -0.07
Nup88-201ENSMUST00000035283 Kiaa1024Q8K3V7 917 aa14.62□□□□□ -0.07
Nup88-201ENSMUST00000035283 HmcesQ8R1M0 353 aaKnown RBP14.62□□□□□ -0.07
Nup88-201ENSMUST00000035283 Rasgef1cQ9D300 466 aa14.62□□□□□ -0.07
Nup88-201ENSMUST00000035283 Lrp2bpQ9D4C6 346 aa14.62□□□□□ -0.07
Nup88-201ENSMUST00000035283 Slfn1Q9Z0I7 337 aa14.62□□□□□ -0.07
Nup88-201ENSMUST00000035283 Vmn2r68L7N2B3 851 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Tnfrsf11aO35305 625 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 AfpP02772 605 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 CatspereP0DP43 985 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Gna14P30677 355 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Cul4aQ3TCH7 759 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Lrrc43Q3V0L5 667 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 BC051142Q3V0M8 400 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Klra5Q60652 266 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 FdxrQ61578 494 aa14.61□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 109.6 ms