RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Casp2P29594 452 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 CebpaP53566 359 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Gjb4Q02738 266 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Pla2g4eQ50L42 875 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Ddx39aQ8VDW0 427 aaKnown RBP19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Cpb2Q9JHH6 422 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Rpf2Q9JJ80 306 aaKnown RBP19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Rnf123Q5XPI3 1314 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Gm8994E9PV04 411 aaKnown RBP19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Erich2E9Q1A6 463 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Cyth2P63034 400 aaKnown RBP19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Sco1Q5SUC9 284 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Pdik1lQ8QZR7 341 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Psip1Q99JF8 528 aaKnown RBP19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Cnot8Q9D8X5 292 aa19.87■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Timm44O35857 452 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Rasa3Q60790 834 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Tmem59lQ7TNI2 337 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 C2cd5Q7TPS5 1016 aaKnown RBP19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Ankrd49Q8VE42 238 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Pcdhgc5Q91XW9 944 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Noc2lQ9WV70 747 aaKnown RBP19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Tcp11x2A2AEI7 503 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Pdha1P35486 390 aaKnown RBP19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Snap25P60879 206 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Meis3P97368 378 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Drap1Q9D6N5 205 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Eif2ak1Q9Z2R9 619 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Nr1i3O35627 358 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 IkbkgO88522 412 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Sema3fO88632 785 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Man1a2P39098 641 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Syt2P46097 422 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Thumpd3P97770 505 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Epha2Q03145 977 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Llgl2Q3TJ91 1027 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Frmpd4A2AFR3 1320 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Gm29133A0A1B0GT72 266 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 DgkkE9Q7N4 1118 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Wdr64Q9D565 1086 aa19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Gtf2ird1Q9JI57 1104 aaKnown RBP19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Add1Q9QYC0 735 aaKnown RBP19.86■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Krt31Q61765 416 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Usp33Q8R5K2 909 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Abt1Q9QYL7 269 aaKnown RBP19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Zranb2Q9R020 330 aaKnown RBP19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Crlf3Q9Z2L7 442 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Eepd1Q3TGW2 569 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Serpinb6Q60854 378 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Rabgap1A2AWA9 1064 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Rexo5D3YW29 759 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Flot1O08917 428 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Fam89aQ14BJ1 175 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Heatr3Q8BQM4 679 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Utp11Q9CZJ1 253 aaKnown RBP19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Mphosph6Q9D1Q1 161 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Krt36B1AQ75 473 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Prkg1P0C605 671 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Tom1l2Q5SRX1 507 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Uba6Q8C7R4 1053 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Tube1Q9D6T1 475 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Arhgef7Q9ES28 862 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Klra17Q9JMA4 273 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Slc8a3S4R2P9 928 aa19.85■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Zfand4D3Z3C6 739 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Serpina16D3Z660 418 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Ttc17E9PVB5 1198 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Slc3a2P10852 526 aaKnown RBP19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 LtbrP50284 415 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Q80ZQ3 298 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Dars2Q8BIP0 653 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Alg3Q8K2A8 438 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Chn1Q91V57 459 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Nde1Q9CZA6 344 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Serpina9Q9D7D2 418 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Abhd2Q9QXM0 425 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Krt27Q9Z320 448 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Ppp1r1bQ60829 194 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Q8C1R3 189 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 NemfQ8CCP0 1064 aaKnown RBP19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Eps8l1Q8R5F8 716 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Pomgnt1Q91X88 660 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Kank3Q9Z1P7 791 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Atp10bB1AWN4 1474 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Nme9A0A1L1SUL6 329 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Sema4dO09126 861 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Cyp19a1P28649 503 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Gpc4P51655 557 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Cyp11b1Q3TG86 501 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Ckap2lQ7TS74 745 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Znf467Q8JZL0 594 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Fmnl1Q9JL26 1094 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Setd1bQ8CFT2 1985 aa19.84■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Osbpl9A2A8Z1 736 aa19.83■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Gm10134F6ZQC6 126 aa19.83■□□□□ 0.77
Ebf3-201ENSMUST00000033378 AgtP11859 477 aa19.83■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Znf652Q5DU09 608 aa19.83■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Tshz2Q68FE9 1030 aa19.83■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Serpina3iD3Z450 408 aa19.83■□□□□ 0.77
Ebf3-201ENSMUST00000033378 Mylk3Q3UIZ8 795 aa19.83■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms