RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Nmt1O70310 496 aaKnown RBP16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Rpl13P47963 211 aaKnown RBP16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Traf5P70191 558 aa16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Slc51bQ80WK2 128 aa16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Klhl7Q8BUL5 586 aa16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Trex1Q91XB0 314 aa16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Arl2bpQ9D385 163 aa16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Calr3Q9D9Q6 380 aa16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Myo1cQ9WTI7 1063 aa16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Rps6ka1P18653 724 aa16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Six2Q62232 296 aa16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Sh3gl2Q62420 352 aa16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Peg10Q7TN75 958 aaKnown RBP16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Ublcp1Q8BGR9 318 aa16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Phf20Q8BLG0 1010 aaKnown RBP16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Tmem132aQ922P8 1018 aa16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 EmcnQ9R0H2 261 aa16.45■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Sema4dO09126 861 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Rgl1Q60695 768 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Gpr101Q80T62 511 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Ccdc181Q80ZU5 509 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Plcg2Q8CIH5 1265 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Havcr2Q8VIM0 281 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Bzw2Q91VK1 419 aaKnown RBP16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Tnfrsf11aO35305 625 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Pja1O55176 578 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 D1Pas1P16381 660 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Lmnb2P21619 596 aaKnown RBP16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 FechP22315 420 aaKnown RBP16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Polr2fP61219 127 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Dph1Q5NCQ5 438 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Asap3Q5U464 904 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Grik5Q61626 979 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 KaznQ69ZS8 779 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Usp38Q8BW70 1042 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 SynrgQ5SV85 1306 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Csf1rP09581 977 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Scarf1Q5ND28 820 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Cacna2d4Q5RJF7 1116 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Kiaa0319Q5SZV5 1081 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Naa15Q80UM3 865 aaKnown RBP16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Tbc1d10cQ8C9V1 444 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Acat1Q8QZT1 424 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Tut1Q8R3F9 869 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Calml4Q91WQ9 153 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Q9DAQ4 598 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 SyncQ9EPM5 470 aa16.44■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Col2a1P28481 1487 aa16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Gm38392E9Q2A2 434 aa16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Krt35Q497I4 455 aa16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Q6PD19 689 aa16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 SucoQ8C341 1250 aa16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Pak2Q8CIN4 524 aa16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 LrmdaQ9D9B4 229 aa16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Ubiad1Q9DC60 336 aa16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Xirp1O70373 1129 aa16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Ogfod1Q3U0K8 545 aa16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Gm5935Q497S0 212 aa16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Kiaa1211Q5PR69 1207 aa16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Atp13a4Q5XF90 1193 aa16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Kif5bQ61768 963 aa16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Cbwd1Q8VEH6 393 aa16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 4921524L21RikQ9D5T2 438 aa16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Cmtm5Q9D6G9 156 aa16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Hyou1Q9JKR6 999 aaKnown RBP16.43■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Acsbg2Q2XU92 667 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Serpinb6dQ3UWK8 375 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Pde1cQ64338 706 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Gfpt2Q9Z2Z9 682 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Ppfia4B8QI36 1187 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Mroh9G5E8L9 891 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Hoxa11P31311 313 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 AdkP55264 361 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 YdjcQ14BV6 310 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Slc10a5Q5PT54 434 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Sin3bQ62141 1098 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Brd2Q7JJ13 798 aaKnown RBP16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Trim47Q8C0E3 641 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 PdxkQ8K183 312 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Fam111aQ9D2L9 613 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Lypla2Q9WTL7 231 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Kank3Q9Z1P7 791 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Klhdc7aA2APT9 773 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 E9QMW4 1145 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Nr1d1Q3UV55 615 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Specc1Q5SXY1 1067 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Mcf2lQ64096 1149 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Bst2Q8R2Q8 172 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 CrygnQ8VHL5 183 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Six6os1Q9CTN5 574 aa16.42■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Gm8298J3QPI0 401 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Tnnc1P19123 161 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Ap1m1P35585 423 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Haus1Q8BHX1 278 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 LgsnQ8CIX8 563 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Ddx47Q9CWX9 455 aaKnown RBP16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Prpf4Q9DAW6 521 aaKnown RBP16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Lrrc38A2VDH3 298 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Fam71aB7XG49 585 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Ace3D0G895 737 aa16.41■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 72.7 ms