RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Ccdc92bQ5SUE3 299 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Nr2e1Q64104 385 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Krt12Q64291 487 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 PicalmQ7M6Y3 660 aaKnown RBP11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 R3hdm2Q80TM6 1044 aaKnown RBP11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Bcas3Q8CCN5 928 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 OtoaQ8K561 1137 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 CbsQ91WT9 561 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Xrcc4Q924T3 326 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 HgsQ99LI8 775 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Ranbp17Q99NF8 1088 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Znf654Q9DAU9 571 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Myh10Q61879 1976 aaKnown RBP11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Ccdc78D3Z5T1 437 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Serpina1bP22599 413 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Usp4P35123 962 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Cacnb3P54285 484 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Rasa2P58069 847 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Senp1P59110 640 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Elf1Q60775 612 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Serpinb6Q60854 378 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Krt31Q61765 416 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Acad11Q80XL6 779 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Lrrc4cQ8C031 640 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Nup58Q8R332 587 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Rfc4Q99J62 364 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Gimap4Q99JY3 219 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 RpainQ9CWY9 219 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Klf15Q9EPW2 415 aa11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Ddx20Q9JJY4 825 aaKnown RBP11.23□□□□□ -0.61
Clip3-201ENSMUST00000014065 Zfp984A2A7A2 547 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Map7d1A2AJI0 846 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Chmp6P0C0A3 200 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Kif5cP28738 956 aaKnown RBP11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Tex11Q14AT2 947 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Rtkn2Q14B46 604 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Dok7Q18PE0 504 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Map3k12Q60700 888 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Hoxa13Q62424 386 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Myo6Q64331 1265 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Nop53Q8BK35 484 aaKnown RBP11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Lpin2Q99PI5 893 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Znf287Q9EQB9 759 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Cul1Q9WTX6 776 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Sh3tc1G3X9F6 1346 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Gm38392E9Q2A2 434 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Gimap9G3X987 291 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 GssP51855 474 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Pstpip1P97814 415 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Gcnt1Q09324 428 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Klra9Q2TJJ8 266 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Psmd1Q3TXS7 953 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Proser2Q8C5R2 471 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Rbm41Q8JZV4 413 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 P3h4Q8K2B0 443 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Lrrc14Q8VC16 493 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Mtmr4Q91XS1 1190 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 CalcbQ99MP3 130 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 PlekQ9JHK5 350 aaKnown RBP11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Cog1Q9Z160 980 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Magea10A2AMW4 325 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Atp2c2A7L9Z8 944 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Hspa9P38647 679 aaKnown RBP11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Rbm46P86049 533 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Vps41Q5KU39 853 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Tbc1d9bQ5SVR0 1263 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Tbc1d1Q60949 1255 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 E2f5Q61502 335 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Znf18Q810A1 556 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Cnot10Q8BH15 744 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Chtf18Q8BIW9 969 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Cplx3Q8R1B5 158 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 SfpqQ8VIJ6 699 aaKnown RBP11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Pcdhb5Q91XZ5 792 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Senp2Q91ZX6 588 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Cep19Q9CQA8 163 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Armc9Q9D2I5 817 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 Cabp5Q9JLK3 173 aa11.22□□□□□ -0.61
Clip3-201ENSMUST00000014065 PappaQ8R4K8 1624 aa11.21□□□□□ -0.61
Clip3-201ENSMUST00000014065 Fam171a1A2ATK9 892 aa11.21□□□□□ -0.61
Clip3-201ENSMUST00000014065 R3hdm1E9Q9Q2 1135 aaKnown RBP11.21□□□□□ -0.61
Clip3-201ENSMUST00000014065 Orc4O88708 433 aa11.21□□□□□ -0.61
Clip3-201ENSMUST00000014065 Rasip1Q3U0S6 961 aa11.21□□□□□ -0.61
Clip3-201ENSMUST00000014065 Serpinb1cQ5SV42 375 aa11.21□□□□□ -0.61
Clip3-201ENSMUST00000014065 Atp13a4Q5XF90 1193 aa11.21□□□□□ -0.61
Clip3-201ENSMUST00000014065 Dnm1lQ8K1M6 742 aa11.21□□□□□ -0.61
Clip3-201ENSMUST00000014065 AagabQ8R2R3 316 aa11.21□□□□□ -0.61
Clip3-201ENSMUST00000014065 Lrrc42Q8R2U7 421 aa11.21□□□□□ -0.61
Clip3-201ENSMUST00000014065 4931423N10RikQ9D4J9 382 aa11.21□□□□□ -0.61
Clip3-201ENSMUST00000014065 Slc5a4aQ9ET37 656 aa11.21□□□□□ -0.61
Clip3-201ENSMUST00000014065 Sertad2Q9JJG5 309 aa11.21□□□□□ -0.61
Clip3-201ENSMUST00000014065 Jag1Q9QXX0 1218 aa11.21□□□□□ -0.61
Clip3-201ENSMUST00000014065 BcamQ9R069 622 aa11.21□□□□□ -0.61
Clip3-201ENSMUST00000014065 Gdf11Q9Z1W4 405 aa11.21□□□□□ -0.61
Clip3-201ENSMUST00000014065 Sipa1l3G3X9J0 1776 aa11.21□□□□□ -0.61
Clip3-201ENSMUST00000014065 Sclt1G5E861 688 aa11.21□□□□□ -0.62
Clip3-201ENSMUST00000014065 Gm8298J3QPI0 401 aa11.21□□□□□ -0.62
Clip3-201ENSMUST00000014065 AurkbO70126 345 aa11.21□□□□□ -0.62
Clip3-201ENSMUST00000014065 DtnbO70585 659 aa11.21□□□□□ -0.62
Clip3-201ENSMUST00000014065 Glg1Q61543 1175 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms