RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Ces4aQ8R0W5 563 aa12.4□□□□□ -0.42
Vps54-201ENSMUST00000006221 Chn1Q91V57 459 aa12.4□□□□□ -0.42
Vps54-201ENSMUST00000006221 Smc6Q924W5 1097 aa12.4□□□□□ -0.42
Vps54-201ENSMUST00000006221 Ndufab1Q9CR21 156 aa12.4□□□□□ -0.42
Vps54-201ENSMUST00000006221 Cdc42ep4Q9JM96 349 aaKnown RBP12.4□□□□□ -0.42
Vps54-201ENSMUST00000006221 Tmod1P49813 359 aa12.4□□□□□ -0.42
Vps54-201ENSMUST00000006221 Fam107bQ3TGF2 131 aa12.4□□□□□ -0.42
Vps54-201ENSMUST00000006221 Arhgap44Q5SSM3 814 aa12.4□□□□□ -0.42
Vps54-201ENSMUST00000006221 Epha7Q61772 998 aa12.4□□□□□ -0.42
Vps54-201ENSMUST00000006221 Abcf2Q99LE6 628 aaKnown RBP12.4□□□□□ -0.42
Vps54-201ENSMUST00000006221 ArcQ9WV31 396 aa12.4□□□□□ -0.42
Vps54-201ENSMUST00000006221 Myh14Q6URW6 2000 aa12.4□□□□□ -0.42
Vps54-201ENSMUST00000006221 Col5a2Q3U962 1497 aa12.4□□□□□ -0.42
Vps54-201ENSMUST00000006221 Flt1P35969 1333 aa12.4□□□□□ -0.42
Vps54-201ENSMUST00000006221 Gm28510A0A087WP28 240 aa12.4□□□□□ -0.43
Vps54-201ENSMUST00000006221 GabreA2AMW3 916 aa12.4□□□□□ -0.43
Vps54-201ENSMUST00000006221 4930523C07RikE9Q2T4 99 aa12.4□□□□□ -0.43
Vps54-201ENSMUST00000006221 TyrobpO54885 114 aa12.4□□□□□ -0.43
Vps54-201ENSMUST00000006221 Il13ra2O88786 383 aa12.4□□□□□ -0.43
Vps54-201ENSMUST00000006221 FechP22315 420 aaKnown RBP12.4□□□□□ -0.43
Vps54-201ENSMUST00000006221 Kiaa0319Q5SZV5 1081 aa12.4□□□□□ -0.43
Vps54-201ENSMUST00000006221 Ankrd13dQ6PD24 605 aa12.4□□□□□ -0.43
Vps54-201ENSMUST00000006221 Slc4a8Q8JZR6 1089 aa12.4□□□□□ -0.43
Vps54-201ENSMUST00000006221 Luc7lQ9CYI4 371 aaKnown RBP12.4□□□□□ -0.43
Vps54-201ENSMUST00000006221 Eif2ak1Q9Z2R9 619 aa12.4□□□□□ -0.43
Vps54-201ENSMUST00000006221 Gfpt2Q9Z2Z9 682 aa12.4□□□□□ -0.43
Vps54-201ENSMUST00000006221 Zfp174B9EJW5 407 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Nmt1O70310 496 aaKnown RBP12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Gna14P30677 355 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Atp6v1aP50516 617 aaKnown RBP12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 MlxipQ2VPU4 917 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Cacna2d4Q5RJF7 1116 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Igf2bp2Q5SF07 592 aaKnown RBP12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 SpidrQ8BGX7 933 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Mtmr2Q9Z2D1 643 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Col11a2Q64739 1736 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Nedd1P33215 660 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Rasa3Q60790 834 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Grik5Q61626 979 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 KaznQ69ZS8 779 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Ms4a5Q810P8 197 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Eif3hQ91WK2 352 aaKnown RBP12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Rabl3Q9D4V7 236 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Siah1bQ06985 282 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Hdgfl1Q2VPR5 283 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Dhx58Q99J87 678 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Arhgef7Q9ES28 862 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 IkQ9Z1M8 557 aaKnown RBP12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Slfn14V9GXG1 899 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Col1a1P11087 1453 aa12.39□□□□□ -0.43
Vps54-201ENSMUST00000006221 Flvcr1B2RXV4 560 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 CraddO88843 199 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Gja5Q01231 358 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 RelaQ04207 549 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Anks6Q6GQX6 883 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Depdc1aQ8CIG0 804 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Rpap2Q8VC34 614 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Gdap1O88741 358 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Mucl2P02815 138 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Becn2P0DM65 447 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Pla2g4eQ50L42 875 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Nell2Q61220 819 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Def6Q8C2K1 630 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Dcaf8Q8N7N5 591 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 MypopQ8R4U1 393 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Prpf4Q9DAW6 521 aaKnown RBP12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Ttll10A4Q9F3 704 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Gm3095E9Q058 166 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Gm5935Q497S0 212 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Scarf1Q5ND28 820 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Naa15Q80UM3 865 aaKnown RBP12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Acad11Q80XL6 779 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 FtoQ8BGW1 502 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Snip1Q8BIZ6 383 aaKnown RBP12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Pym1Q8CHP5 203 aaKnown RBP12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 TxlnbQ8VBT1 685 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Nap1l5Q9JJF0 156 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 GgcxQ9QYC7 757 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Sept3Q9Z1S5 350 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Gsg1l2M0QWL6 290 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Lmnb2P21619 596 aaKnown RBP12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Tatdn3Q3U1C6 294 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Large2Q5XPT3 690 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Git1Q68FF6 770 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Tspyl5Q69ZB3 406 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Tmc4Q7TQ65 694 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Mboat7Q8CHK3 473 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Coa7Q921H9 231 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 Tlr2Q9QUN7 784 aa12.38□□□□□ -0.43
Vps54-201ENSMUST00000006221 DtnbO70585 659 aa12.37□□□□□ -0.43
Vps54-201ENSMUST00000006221 CrkQ64010 304 aa12.37□□□□□ -0.43
Vps54-201ENSMUST00000006221 Msl1Q6PDM1 616 aa12.37□□□□□ -0.43
Vps54-201ENSMUST00000006221 Ppm1eQ80TL0 749 aa12.37□□□□□ -0.43
Vps54-201ENSMUST00000006221 Ccdc87Q8CDL9 855 aa12.37□□□□□ -0.43
Vps54-201ENSMUST00000006221 Prkab1Q9R078 270 aa12.37□□□□□ -0.43
Vps54-201ENSMUST00000006221 Ubr3Q5U430 1889 aa12.37□□□□□ -0.43
Vps54-201ENSMUST00000006221 Wdr72D3YYM4 1114 aa12.37□□□□□ -0.43
Vps54-201ENSMUST00000006221 Clcn6O35454 870 aa12.37□□□□□ -0.43
Vps54-201ENSMUST00000006221 Mmp15O54732 657 aa12.37□□□□□ -0.43
Vps54-201ENSMUST00000006221 Tnnc1P19123 161 aa12.37□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms