RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 FAR10Q06001 478 aa0.72□□□□□ -2.29
snR55snR55 EXG1P23776 448 aaKnown RBP0.71□□□□□ -2.3
snR55snR55 GEX1P25596 615 aa0.71□□□□□ -2.3
snR55snR55 COX13P32799 129 aa0.71□□□□□ -2.3
snR55snR55 PMT1P33775 817 aa0.71□□□□□ -2.3
snR55snR55 CMC1P36064 111 aa0.71□□□□□ -2.3
snR55snR55 FRM2P37261 193 aa0.71□□□□□ -2.3
snR55snR55 SMP1P38128 452 aa0.71□□□□□ -2.3
snR55snR55 SCC4P40090 624 aa0.71□□□□□ -2.3
snR55snR55 COS4P43542 379 aa0.71□□□□□ -2.3
snR55snR55 VPS75P53853 264 aa0.71□□□□□ -2.3
snR55snR55 TAF12Q03761 539 aa0.71□□□□□ -2.3
snR55snR55 GIR2Q03768 265 aaPredicted RBP0.71□□□□□ -2.3
snR55snR55 SEM1O94742 89 aa0.7□□□□□ -2.3
snR55snR55 CAP2P13517 287 aa0.7□□□□□ -2.3
snR55snR55 SOR1P35497 357 aaKnown RBP0.7□□□□□ -2.3
snR55snR55 TRR2P38816 342 aa0.7□□□□□ -2.3
snR55snR55 HXT14P42833 540 aa0.7□□□□□ -2.3
snR55snR55 ENT5Q03769 411 aaKnown RBP0.7□□□□□ -2.3
snR55snR55 YLR345WQ06137 509 aa0.7□□□□□ -2.3
snR55snR55 SOR2Q07786 357 aa0.7□□□□□ -2.3
snR55snR55 MCT1Q12283 360 aa0.7□□□□□ -2.3
snR55snR55 SAG1P20840 650 aa0.69□□□□□ -2.3
snR55snR55 PPH22P23595 377 aa0.69□□□□□ -2.3
snR55snR55 PPQ1P32945 549 aa0.69□□□□□ -2.3
snR55snR55 PEX22P39718 180 aa0.69□□□□□ -2.3
snR55snR55 OPY2Q06810 360 aa0.69□□□□□ -2.3
snR55snR55 LOT6Q07923 191 aa0.69□□□□□ -2.3
snR55snR55 ATG29Q12092 213 aa0.69□□□□□ -2.3
snR55snR55 RHB1P25378 209 aa0.68□□□□□ -2.3
snR55snR55 KRE2P27809 442 aa0.68□□□□□ -2.3
snR55snR55 MKK1P32490 508 aa0.68□□□□□ -2.3
snR55snR55 NOP4P37838 685 aaKnown RBP0.68□□□□□ -2.3
snR55snR55 NBP1P52919 319 aaPredicted RBP0.68□□□□□ -2.3
snR55snR55 YHC1Q05900 231 aaKnown RBP0.68□□□□□ -2.3
snR55snR55 YOR376WQ08900 122 aa0.68□□□□□ -2.3
snR55snR55 DDC1Q08949 612 aa0.68□□□□□ -2.3
snR55snR55 AUS1Q08409 1394 aa0.68□□□□□ -2.3
snR55snR55 PIS1P06197 220 aaKnown RBP0.67□□□□□ -2.3
snR55snR55 STE7P06784 515 aa0.67□□□□□ -2.3
snR55snR55 DAL5P15365 543 aa0.67□□□□□ -2.3
snR55snR55 FUS3P16892 353 aaKnown RBP0.67□□□□□ -2.3
snR55snR55 FUN26P31381 517 aa0.67□□□□□ -2.3
snR55snR55 HXT3P32466 567 aaKnown RBP0.67□□□□□ -2.3
snR55snR55 SOL2P37262 315 aa0.67□□□□□ -2.3
snR55snR55 ECM34P38728 170 aa0.67□□□□□ -2.3
snR55snR55 RRP4P38792 359 aaKnown RBP0.67□□□□□ -2.3
snR55snR55 YIL059CP40520 121 aa0.67□□□□□ -2.3
snR55snR55 RPS0BP46654 252 aaKnown RBP0.67□□□□□ -2.3
snR55snR55 PHO86P46956 311 aa0.67□□□□□ -2.3
snR55snR55 INP2Q03824 705 aa0.67□□□□□ -2.3
snR55snR55 VMS1Q04311 632 aaKnown RBP0.67□□□□□ -2.3
snR55snR55 YMR018WQ04364 514 aa0.67□□□□□ -2.3
snR55snR55 SNT309Q06091 175 aaPredicted RBP0.67□□□□□ -2.3
snR55snR55 YDL114WQ07530 308 aa0.67□□□□□ -2.3
snR55snR55 SIL1Q08199 421 aa0.67□□□□□ -2.3
snR55snR55 RKM1Q08961 583 aaPredicted RBP0.67□□□□□ -2.3
snR55snR55 YCR024C-BQ3E7Z8 88 aa0.67□□□□□ -2.3
snR55snR55 IMA3P0CW40 589 aa0.66□□□□□ -2.3
snR55snR55 IMA4P0CW41 589 aa0.66□□□□□ -2.3
snR55snR55 AAC3P18238 307 aa0.66□□□□□ -2.3
snR55snR55 GIT1P25346 518 aa0.66□□□□□ -2.3
snR55snR55 BEM1P29366 551 aa0.66□□□□□ -2.3
snR55snR55 MCM10P32354 571 aa0.66□□□□□ -2.3
snR55snR55 TOA1P32773 286 aa0.66□□□□□ -2.3
snR55snR55 ATG12P38316 186 aa0.66□□□□□ -2.3
snR55snR55 HEM14P40012 539 aa0.66□□□□□ -2.3
snR55snR55 KEG1P43614 200 aa0.66□□□□□ -2.3
snR55snR55 VEL1P53058 206 aa0.66□□□□□ -2.3
snR55snR55 URH1Q04179 340 aa0.66□□□□□ -2.3
snR55snR55 PRM6Q04705 352 aa0.66□□□□□ -2.3
snR55snR55 RQC1Q05468 723 aaKnown RBP0.66□□□□□ -2.3
snR55snR55 IMA2Q08295 589 aa0.66□□□□□ -2.3
snR55snR55 FCY22Q12119 530 aa0.66□□□□□ -2.3
snR55snR55 ATG34Q12292 412 aa0.66□□□□□ -2.3
snR55snR55 YDL199CQ12407 687 aa0.66□□□□□ -2.3
snR55snR55 SCEIP03882 235 aa0.65□□□□□ -2.31
snR55snR55 RPS23AP0CX29 145 aaKnown RBP0.65□□□□□ -2.31
snR55snR55 RPS23BP0CX30 145 aa0.65□□□□□ -2.31
snR55snR55 ZIP1P31111 875 aa0.65□□□□□ -2.31
snR55snR55 DBP7P36120 742 aaKnown RBP0.65□□□□□ -2.31
snR55snR55 YBR056WP38081 501 aa0.65□□□□□ -2.31
snR55snR55 NOP16P40007 231 aaKnown RBP0.65□□□□□ -2.31
snR55snR55 MET18P40469 1032 aa0.65□□□□□ -2.31
snR55snR55 RGM1Q00453 211 aa0.65□□□□□ -2.31
snR55snR55 YDR115WQ04598 105 aa0.65□□□□□ -2.31
snR55snR55 MRX8Q05473 314 aa0.65□□□□□ -2.31
snR55snR55 LDS2Q08218 356 aa0.65□□□□□ -2.31
snR55snR55 YOR338WQ99326 363 aa0.65□□□□□ -2.31
snR55snR55 ASP3-2P0CX77 362 aa0.64□□□□□ -2.31
snR55snR55 ASP3-3P0CX78 362 aa0.64□□□□□ -2.31
snR55snR55 ASP3-4P0CX79 362 aa0.64□□□□□ -2.31
snR55snR55 ASP3-1P0CZ17 362 aa0.64□□□□□ -2.31
snR55snR55 PHO84P25297 587 aaKnown RBP0.64□□□□□ -2.31
snR55snR55 DBF4P32325 704 aa0.64□□□□□ -2.31
snR55snR55 ALK2P32789 676 aaPredicted RBP0.64□□□□□ -2.31
snR55snR55 WSC4P38739 605 aa0.64□□□□□ -2.31
snR55snR55 TOS3P43637 560 aa0.64□□□□□ -2.31
snR55snR55 JJJ1P53863 590 aa0.64□□□□□ -2.31
snR55snR55 VAC7P53950 1165 aa0.64□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms