RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C CTF19Q02732 369 aa3.07□□□□□ -1.92
LCB4YOR171C YDC1Q02896 317 aa3.07□□□□□ -1.92
LCB4YOR171C EBS1Q03466 884 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C YML053CQ04978 212 aa3.07□□□□□ -1.92
LCB4YOR171C SPO77Q06134 477 aa3.07□□□□□ -1.92
LCB4YOR171C MRI1Q06489 411 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C YPR147CQ06522 304 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C YPR078CQ06813 372 aa3.07□□□□□ -1.92
LCB4YOR171C YPD1Q07688 167 aa3.07□□□□□ -1.92
LCB4YOR171C RAX1Q08760 435 aa3.07□□□□□ -1.92
LCB4YOR171C YOR289WQ12012 251 aaPredicted RBP3.07□□□□□ -1.92
LCB4YOR171C YLR108CQ12259 485 aa3.07□□□□□ -1.92
LCB4YOR171C PRS5Q12265 496 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C AHA1Q12449 350 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C RAD1P06777 1100 aa3.07□□□□□ -1.92
LCB4YOR171C ADE5,7P07244 802 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C CDC33P07260 213 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C MET16P18408 261 aaPredicted RBP3.07□□□□□ -1.92
LCB4YOR171C YUR1P26725 428 aa3.07□□□□□ -1.92
LCB4YOR171C PPZ2P33329 710 aa3.07□□□□□ -1.92
LCB4YOR171C YOX1P34161 385 aa3.07□□□□□ -1.92
LCB4YOR171C UTP11P34247 250 aaPredicted RBP3.07□□□□□ -1.92
LCB4YOR171C RIB1P38066 345 aa3.07□□□□□ -1.92
LCB4YOR171C IML3P38265 245 aa3.07□□□□□ -1.92
LCB4YOR171C YER184CP39961 794 aa3.07□□□□□ -1.92
LCB4YOR171C YER121WP40076 114 aa3.07□□□□□ -1.92
LCB4YOR171C LAS21P40367 830 aa3.07□□□□□ -1.92
LCB4YOR171C CDC40P40968 455 aaPredicted RBP3.07□□□□□ -1.92
LCB4YOR171C TFG2P41896 400 aaPredicted RBP3.07□□□□□ -1.92
LCB4YOR171C AGP3P43548 558 aa3.07□□□□□ -1.92
LCB4YOR171C MDV1P47025 714 aa3.07□□□□□ -1.92
LCB4YOR171C COX20Q04935 205 aa3.07□□□□□ -1.92
LCB4YOR171C THI3Q07471 609 aa3.07□□□□□ -1.92
LCB4YOR171C PAM18Q07914 168 aa3.07□□□□□ -1.92
LCB4YOR171C YOR029WQ12243 111 aa3.07□□□□□ -1.92
LCB4YOR171C YDR262WQ12331 272 aa3.07□□□□□ -1.92
LCB4YOR171C ERG27Q12452 347 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C RHO1P06780 209 aaKnown RBP3.06□□□□□ -1.92
LCB4YOR171C AQY1P0CD91 305 aa3.06□□□□□ -1.92
LCB4YOR171C RPL24BP24000 155 aaKnown RBP3.06□□□□□ -1.92
LCB4YOR171C RBK1P25332 333 aa3.06□□□□□ -1.92
LCB4YOR171C RPS5P26783 225 aaKnown RBP3.06□□□□□ -1.92
LCB4YOR171C PRP18P33411 251 aaPredicted RBP3.06□□□□□ -1.92
LCB4YOR171C ECT1P33412 323 aa3.06□□□□□ -1.92
LCB4YOR171C YKL063CP35725 167 aa3.06□□□□□ -1.92
LCB4YOR171C ZTA1P38230 334 aaKnown RBP3.06□□□□□ -1.92
LCB4YOR171C ERG7P38604 731 aa3.06□□□□□ -1.92
LCB4YOR171C EXO1P39875 702 aa3.06□□□□□ -1.92
LCB4YOR171C YMR147WP40218 223 aaKnown RBP3.06□□□□□ -1.92
LCB4YOR171C ATM1P40416 690 aa3.06□□□□□ -1.92
LCB4YOR171C OPT1P40897 799 aa3.06□□□□□ -1.92
LCB4YOR171C DPB11P47027 764 aaPredicted RBP3.06□□□□□ -1.92
LCB4YOR171C GOR1P53839 350 aa3.06□□□□□ -1.92
LCB4YOR171C FYV6P53913 173 aa3.06□□□□□ -1.92
LCB4YOR171C NUP116Q02630 1113 aa3.06□□□□□ -1.92
LCB4YOR171C MTG1Q03151 367 aaPredicted RBP3.06□□□□□ -1.92
LCB4YOR171C RVB1Q03940 463 aaKnown RBP3.06□□□□□ -1.92
LCB4YOR171C YMR130WQ04223 302 aa3.06□□□□□ -1.92
LCB4YOR171C AIM33Q04516 312 aa3.06□□□□□ -1.92
LCB4YOR171C CDC123Q05791 360 aa3.06□□□□□ -1.92
LCB4YOR171C CYK3Q07533 885 aa3.06□□□□□ -1.92
LCB4YOR171C GEP3Q08622 556 aa3.06□□□□□ -1.92
LCB4YOR171C MUM3Q08750 479 aa3.06□□□□□ -1.92
LCB4YOR171C YOR012WQ12351 137 aa3.06□□□□□ -1.92
LCB4YOR171C SEY1Q99287 776 aa3.06□□□□□ -1.92
LCB4YOR171C CHS1P08004 1131 aa3.05□□□□□ -1.92
LCB4YOR171C TUB1P09733 447 aaKnown RBP3.05□□□□□ -1.92
LCB4YOR171C REV1P12689 985 aa3.05□□□□□ -1.92
LCB4YOR171C FRS2P15625 503 aaKnown RBP3.05□□□□□ -1.92
LCB4YOR171C URA4P20051 364 aa3.05□□□□□ -1.92
LCB4YOR171C YSR3P23501 404 aa3.05□□□□□ -1.92
LCB4YOR171C YIH1P25637 258 aa3.05□□□□□ -1.92
LCB4YOR171C GSY2P27472 705 aa3.05□□□□□ -1.92
LCB4YOR171C GCD7P32502 381 aaPredicted RBP3.05□□□□□ -1.92
LCB4YOR171C PAD1P33751 242 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
LCB4YOR171C TCD2P36101 447 aaKnown RBP3.05□□□□□ -1.92
LCB4YOR171C URA8P38627 578 aaPredicted RBP3.05□□□□□ -1.92
LCB4YOR171C YAP3P38749 330 aa3.05□□□□□ -1.92
LCB4YOR171C PRP39P39682 629 aaKnown RBP3.05□□□□□ -1.92
LCB4YOR171C FRT2P39734 528 aa3.05□□□□□ -1.92
LCB4YOR171C PCI8P40512 444 aa3.05□□□□□ -1.92
LCB4YOR171C YKE4P40544 346 aa3.05□□□□□ -1.92
LCB4YOR171C IME4P41833 600 aa3.05□□□□□ -1.92
LCB4YOR171C YAR1P46683 200 aa3.05□□□□□ -1.92
LCB4YOR171C CTK2P46962 323 aa3.05□□□□□ -1.92
LCB4YOR171C FMP33P46998 180 aa3.05□□□□□ -1.92
LCB4YOR171C RTT101P47050 842 aa3.05□□□□□ -1.92
LCB4YOR171C AIM22P47051 409 aa3.05□□□□□ -1.92
LCB4YOR171C NPA3P47122 385 aa3.05□□□□□ -1.92
LCB4YOR171C YGL036WP53185 909 aaPredicted RBP3.05□□□□□ -1.92
LCB4YOR171C YNL260CP53846 198 aa3.05□□□□□ -1.92
LCB4YOR171C BOP3P53958 396 aa3.05□□□□□ -1.92
LCB4YOR171C SKO1Q02100 647 aa3.05□□□□□ -1.92
LCB4YOR171C STD1Q02794 444 aa3.05□□□□□ -1.92
LCB4YOR171C EKI1Q03764 534 aa3.05□□□□□ -1.92
LCB4YOR171C PLM2Q04383 521 aa3.05□□□□□ -1.92
LCB4YOR171C FAR8Q05040 523 aa3.05□□□□□ -1.92
LCB4YOR171C NDE2Q07500 545 aa3.05□□□□□ -1.92
LCB4YOR171C YDL144CQ07589 356 aa3.05□□□□□ -1.92
LCB4YOR171C RPN8Q08723 338 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms