RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUB1	YNL016W	RSN1	Q03516	953 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	YDR109C	Q04585	715 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	RRN11	Q04712	507 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	GTO3	Q04806	366 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	MDM30	Q05930	598 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	NKP2	Q06162	153 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	SMC5	Q08204	1093 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.76	□□□□□ -1.81	not detected
PUB1	YNL016W	YOR012W	Q12351	137 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	FMP16	Q12497	93 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	COX4	P04037	155 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	RPL24A	P04449	155 aa	Known RBP	3.76	□□□□□ -1.81
PUB1	YNL016W	CDC36	P06100	191 aa	Predicted RBP	3.76	□□□□□ -1.81
PUB1	YNL016W	MAS1	P10507	462 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	SAR1	P20606	190 aa	Known RBP	3.76	□□□□□ -1.81
PUB1	YNL016W	GID7	P25569	745 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	BEM1	P29366	551 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	SIN4	P32259	974 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	YBR053C	P38235	358 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	TSC10	P38342	320 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	EFM2	P38347	419 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	STN1	P38960	494 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	GAA1	P39012	614 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	FMC1	P40491	155 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	FIS1	P40515	155 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	YRB2	P40517	327 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	SPG5	P42933	373 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	YFR020W	P43600	232 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	AMA1	P50082	593 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	ROG1	P53118	685 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	ORC3	P54790	616 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	RTN1	Q04947	295 aa	Known RBP	3.76	□□□□□ -1.81
PUB1	YNL016W	GPN3	Q06543	272 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	TEN1	Q07921	160 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	YOL159C	Q08300	171 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	RDR1	Q08904	546 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	PUS9	Q12069	462 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	MRH1	Q12117	320 aa	Predicted RBP	3.76	□□□□□ -1.81
PUB1	YNL016W	RUP1	Q12242	671 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	TRM13	Q12383	476 aa		3.76	□□□□□ -1.81
PUB1	YNL016W	SCEI	P03882	235 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	HAP2	P06774	265 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	ATP1	P07251	545 aa	Known RBP	3.75	□□□□□ -1.81
PUB1	YNL016W	COR1	P07256	457 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	YMR085W	P0CF18	432 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	ERG11	P10614	530 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	YPK1	P12688	680 aa	Known RBP	3.75	□□□□□ -1.81
PUB1	YNL016W	CLN3	P13365	580 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	SEC63	P14906	663 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	FUS3	P16892	353 aa	Known RBP	3.75	□□□□□ -1.81
PUB1	YNL016W	CNA1	P23287	553 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	RVS161	P25343	265 aa	Known RBP	3.75	□□□□□ -1.81
PUB1	YNL016W	MGR1	P25573	417 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	KAR4	P25583	335 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	PEX34	P25584	144 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	GAC1	P28006	793 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	FRE1	P32791	686 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	ELF1	P36053	145 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	CUE2	P36075	443 aa	Known RBP	3.75	□□□□□ -1.81
PUB1	YNL016W	RPL32	P38061	130 aa	Known RBP	3.75	□□□□□ -1.81
PUB1	YNL016W	HMT1	P38074	348 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	DUG2	P38149	878 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	PTR3	P43606	678 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	TOS3	P43637	560 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	UBC11	P52492	156 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	ERG26	P53199	349 aa	Known RBP	3.75	□□□□□ -1.81
PUB1	YNL016W	YNL260C	P53846	198 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	NOP12	Q08208	459 aa	Known RBP	3.75	□□□□□ -1.81
PUB1	YNL016W	GEP3	Q08622	556 aa		3.75	□□□□□ -1.81
PUB1	YNL016W	LSP1	Q12230	341 aa	Known RBP	3.75	□□□□□ -1.81
PUB1	YNL016W	RAD50	P12753	1312 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	IRA1	P18963	3092 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	MSF1	P08425	469 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	PET111	P08468	800 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	ABF1	P14164	731 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	RPI1	P23250	407 aa	Known RBP	3.74	□□□□□ -1.81
PUB1	YNL016W	DAL2	P25335	343 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	YCR016W	P25617	290 aa	Known RBP	3.74	□□□□□ -1.81
PUB1	YNL016W	ECM25	P32525	599 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	SPR1	P32603	445 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	ADE17	P38009	592 aa	Known RBP	3.74	□□□□□ -1.81
PUB1	YNL016W	KAP104	P38217	918 aa	Known RBP	3.74	□□□□□ -1.81
PUB1	YNL016W	SPP381	P38282	291 aa	Predicted RBP	3.74	□□□□□ -1.81
PUB1	YNL016W	VHC1	P38329	1120 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	VBA2	P38358	474 aa	Known RBP	3.74	□□□□□ -1.81
PUB1	YNL016W	SPC97	P38863	823 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	MBB1	P39534	108 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	UTP18	P40362	594 aa	Predicted RBP	3.74	□□□□□ -1.81
PUB1	YNL016W	LAS21	P40367	830 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	TFG2	P41896	400 aa	Predicted RBP	3.74	□□□□□ -1.81
PUB1	YNL016W	BUD17	P53727	317 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	ATG4	P53867	494 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	KTR5	P53966	522 aa	Predicted RBP	3.74	□□□□□ -1.81
PUB1	YNL016W	CDA2	Q06703	312 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	RXT3	Q07458	294 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	DNL4	Q08387	944 aa	Predicted RBP	3.74	□□□□□ -1.81
PUB1	YNL016W	NRT1	Q08485	598 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	AFT2	Q08957	416 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	APC2	Q12440	853 aa		3.74	□□□□□ -1.81
PUB1	YNL016W	PAA1	Q12447	191 aa	Known RBP	3.74	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms