RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C TY1A-DR6P0CX70 440 aa3.33□□□□□ -1.88
SHH3YMR118C TY1A-ER1P0CX71 440 aa3.33□□□□□ -1.88
SHH3YMR118C TY1A-LR2P0CX72 440 aa3.33□□□□□ -1.88
SHH3YMR118C TY1A-PLP0CX73 440 aa3.33□□□□□ -1.88
SHH3YMR118C TY1A-JR1P0CX74 440 aa3.33□□□□□ -1.88
SHH3YMR118C TY1A-LR3P0CX75 440 aa3.33□□□□□ -1.88
SHH3YMR118C TY1A-ML2P0CX76 440 aa3.33□□□□□ -1.88
SHH3YMR118C UNG1P12887 359 aa3.33□□□□□ -1.88
SHH3YMR118C MET8P15807 274 aa3.33□□□□□ -1.88
SHH3YMR118C PRI2P20457 528 aa3.33□□□□□ -1.88
SHH3YMR118C HXT2P23585 541 aa3.33□□□□□ -1.88
SHH3YMR118C PEX1P24004 1043 aa3.33□□□□□ -1.88
SHH3YMR118C RSA4P25382 515 aaKnown RBP3.33□□□□□ -1.88
SHH3YMR118C PEX34P25584 144 aa3.33□□□□□ -1.88
SHH3YMR118C TAH1P25638 111 aaPredicted RBP3.33□□□□□ -1.88
SHH3YMR118C MSS1P32559 526 aaPredicted RBP3.33□□□□□ -1.88
SHH3YMR118C TKL2P33315 681 aa3.33□□□□□ -1.88
SHH3YMR118C CTF13P35203 478 aa3.33□□□□□ -1.88
SHH3YMR118C YKL077WP36081 392 aa3.33□□□□□ -1.88
SHH3YMR118C MRPL3P36516 390 aa3.33□□□□□ -1.88
SHH3YMR118C YCR087C-AP37263 153 aa3.33□□□□□ -1.88
SHH3YMR118C YBR056WP38081 501 aa3.33□□□□□ -1.88
SHH3YMR118C LDB7P38210 180 aa3.33□□□□□ -1.88
SHH3YMR118C RCK1P38622 512 aa3.33□□□□□ -1.88
SHH3YMR118C URA8P38627 578 aaPredicted RBP3.33□□□□□ -1.88
SHH3YMR118C YHR033WP38690 423 aa3.33□□□□□ -1.88
SHH3YMR118C KSP1P38691 1029 aaKnown RBP3.33□□□□□ -1.88
SHH3YMR118C GRE3P38715 327 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
SHH3YMR118C EXO1P39875 702 aa3.33□□□□□ -1.88
SHH3YMR118C BUR6P40096 142 aa3.33□□□□□ -1.88
SHH3YMR118C PRE6P40303 254 aaKnown RBP3.33□□□□□ -1.88
SHH3YMR118C ALG8P40351 577 aa3.33□□□□□ -1.88
SHH3YMR118C HXT9P40885 567 aa3.33□□□□□ -1.88
SHH3YMR118C ATG18P43601 500 aa3.33□□□□□ -1.88
SHH3YMR118C SNG1P46950 547 aa3.33□□□□□ -1.88
SHH3YMR118C PMT4P46971 762 aa3.33□□□□□ -1.88
SHH3YMR118C NET1P47035 1189 aa3.33□□□□□ -1.88
SHH3YMR118C BIT61P47041 543 aa3.33□□□□□ -1.88
SHH3YMR118C ECM27P47144 725 aa3.33□□□□□ -1.88
SHH3YMR118C JHD2P47156 728 aaPredicted RBP3.33□□□□□ -1.88
SHH3YMR118C HMS2P47175 358 aa3.33□□□□□ -1.88
SHH3YMR118C TIS11P47977 285 aa3.33□□□□□ -1.88
SHH3YMR118C IGO1P53897 168 aa3.33□□□□□ -1.88
SHH3YMR118C YNL134CP53912 376 aaKnown RBP3.33□□□□□ -1.88
SHH3YMR118C STP1Q00947 519 aa3.33□□□□□ -1.88
SHH3YMR118C RPL6AQ02326 176 aaKnown RBP3.33□□□□□ -1.88
SHH3YMR118C IRC15Q02733 499 aa3.33□□□□□ -1.88
SHH3YMR118C YML020WQ03722 664 aa3.33□□□□□ -1.88
SHH3YMR118C AIM36Q03798 255 aa3.33□□□□□ -1.88
SHH3YMR118C YLR283WQ05867 314 aa3.33□□□□□ -1.88
SHH3YMR118C PHO92Q06390 306 aa3.33□□□□□ -1.88
SHH3YMR118C RSC3Q06639 885 aa3.33□□□□□ -1.88
SHH3YMR118C ASR1Q06834 288 aa3.33□□□□□ -1.88
SHH3YMR118C HRK1Q08732 759 aaKnown RBP3.33□□□□□ -1.88
SHH3YMR118C RRG7Q08774 242 aaPredicted RBP3.33□□□□□ -1.88
SHH3YMR118C TY1A-GR1Q12085 440 aa3.33□□□□□ -1.88
SHH3YMR118C UPC2Q12151 913 aa3.33□□□□□ -1.88
SHH3YMR118C SIA1Q12212 622 aa3.33□□□□□ -1.88
SHH3YMR118C RPN5Q12250 445 aaKnown RBP3.33□□□□□ -1.88
SHH3YMR118C YOR131CQ12486 218 aa3.33□□□□□ -1.88
SHH3YMR118C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.33□□□□□ -1.88
SHH3YMR118C TY1A-OLQ92392 440 aaKnown RBP3.33□□□□□ -1.88
SHH3YMR118C YLR149CQ99296 730 aa3.33□□□□□ -1.88
SHH3YMR118C TAD3Q9URQ3 322 aa3.33□□□□□ -1.88
SHH3YMR118C IPP1P00817 287 aaKnown RBP3.32□□□□□ -1.88
SHH3YMR118C RAD52P06778 471 aaKnown RBP3.32□□□□□ -1.88
SHH3YMR118C STE3P06783 470 aa3.32□□□□□ -1.88
SHH3YMR118C CIT2P08679 460 aa3.32□□□□□ -1.88
SHH3YMR118C MRP2P10663 115 aaPredicted RBP3.32□□□□□ -1.88
SHH3YMR118C KAR1P11927 433 aa3.32□□□□□ -1.88
SHH3YMR118C TFS1P14306 219 aa3.32□□□□□ -1.88
SHH3YMR118C KIN3P22209 435 aa3.32□□□□□ -1.88
SHH3YMR118C DCC1P25559 380 aa3.32□□□□□ -1.88
SHH3YMR118C RER1P25560 188 aa3.32□□□□□ -1.88
SHH3YMR118C ARE1P25628 610 aa3.32□□□□□ -1.88
SHH3YMR118C CPR3P25719 182 aa3.32□□□□□ -1.88
SHH3YMR118C CAM1P29547 415 aaKnown RBP3.32□□□□□ -1.88
SHH3YMR118C SEC17P32602 292 aa3.32□□□□□ -1.88
SHH3YMR118C LST4P34239 828 aa3.32□□□□□ -1.88
SHH3YMR118C TEF4P36008 412 aaKnown RBP3.32□□□□□ -1.88
SHH3YMR118C ADD66P36040 267 aa3.32□□□□□ -1.88
SHH3YMR118C RSM22P36056 628 aa3.32□□□□□ -1.88
SHH3YMR118C YKR051WP36142 418 aa3.32□□□□□ -1.88
SHH3YMR118C YBR137WP38276 179 aa3.32□□□□□ -1.88
SHH3YMR118C SBE22P38814 852 aa3.32□□□□□ -1.88
SHH3YMR118C YAP1801P38856 637 aa3.32□□□□□ -1.88
SHH3YMR118C MDM31P38880 579 aa3.32□□□□□ -1.88
SHH3YMR118C NVJ1P38881 321 aa3.32□□□□□ -1.88
SHH3YMR118C NAB3P38996 802 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
SHH3YMR118C GDI1P39958 451 aaKnown RBP3.32□□□□□ -1.88
SHH3YMR118C DOT6P40059 670 aaKnown RBP3.32□□□□□ -1.88
SHH3YMR118C VRG4P40107 337 aa3.32□□□□□ -1.88
SHH3YMR118C NDE1P40215 560 aa3.32□□□□□ -1.88
SHH3YMR118C PAN6P40459 309 aa3.32□□□□□ -1.88
SHH3YMR118C TIR3P40552 269 aa3.32□□□□□ -1.88
SHH3YMR118C ERG10P41338 398 aaKnown RBP3.32□□□□□ -1.88
SHH3YMR118C YFR018CP43599 363 aa3.32□□□□□ -1.88
SHH3YMR118C LSM1P47017 172 aaKnown RBP3.32□□□□□ -1.88
SHH3YMR118C TIM54P47045 478 aa3.32□□□□□ -1.88
SHH3YMR118C YAE1P47118 141 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms